Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.EB95VJ Arachis hypogaea HOM05D007678 ORTHO05D009658 3.7e-133 478.4 278 100.0
Medtr7g009670 Medicago truncatula HOM05D007678 ORTHO05D009658 5.1e-82 308.5 238 72.3
Psat3g196520 Pisum sativum HOM05D007678 ORTHO05D009658 4.3e-81 305.4 239 70.7
Glyma.09G240200 Glycine max HOM05D007678 ORTHO05D009658 7.4e-81 304.7 240 71.7
Lalb_Chr17g0337231 Lupinus albus HOM05D007678 ORTHO05D009658 9.0e-79 297.7 238 68.9
Ca_04109_v3 Cicer arietinum L. HOM05D007678 ORTHO05D009658 2.0e-78 296.6 240 72.1
Ca_04118_v3 Cicer arietinum L. HOM05D007678 ORTHO05D009658 2.0e-78 296.6 240 72.1
Lj1g0010481 Lotus japonicus HOM05D007678 ORTHO05D009658 7.6e-78 294.7 220 73.6
QL04p021923 Quercus lobata HOM05D007678 ORTHO05D009658 1.4e-68 263.8 233 63.1
Atru.chr2.1713_Atru.chr2.1714 Acer truncatum HOM05D007678 ORTHO05D009658 1.9e-68 263.5 236 63.1
Prupe.2G048500 Prunus persica HOM05D007678 ORTHO05D009658 3.2e-68 262.7 220 66.8
Haze_02966 Corylus avellana HOM05D007678 ORTHO05D009658 2.1e-67 260.0 254 60.2
MD02G1272300 Malus domestica HOM05D007678 ORTHO05D009658 1.0e-66 257.7 223 65.5
FAN10G0661 Fragaria x ananassa HOM05D007678 ORTHO05D009658 1.8e-66 256.9 222 65.8
RcHm_v2.0_Chr1g0328821 Rosa chinensis HOM05D007678 ORTHO05D009658 1.8e-66 256.9 226 64.6
FvH4_7g04260 Fragaria vesca HOM05D007678 ORTHO05D009658 2.3e-66 256.5 222 65.3
Potri.001G033500 Populus trichocarpa HOM05D007678 ORTHO05D009658 2.5e-65 253.1 217 65.9
FAN06G1516 Fragaria x ananassa HOM05D007678 ORTHO05D009658 4.3e-65 252.3 245 59.6
Dinv31528 Davidia involucrata HOM05D007678 ORTHO05D009658 1.3e-64 250.8 236 60.6
Glyma.18G256300 Glycine max HOM05D007678 ORTHO05D009658 1.7e-64 250.4 247 61.1
Duzib106G1843 Durio zibethinus HOM05D007678 ORTHO05D009658 6.3e-64 248.4 225 62.2
TAR623G0324 Trochodendron aralioides HOM05D007678 ORTHO05D009658 2.4e-63 246.5 234 59.8
Actinidia01693 Actinidia chinensis HOM05D007678 ORTHO05D009658 3.1e-63 246.1 216 63.0
Nn7g37012 Nelumbo nucifera HOM05D007678 ORTHO05D009658 2.0e-62 243.4 237 56.1
arahy.Tifrunner.gnm1.ann1.L3S1G4 Arachis hypogaea HOM05D007678 ORTHO05D009658 7.7e-62 241.5 217 66.4
MBI13_g30074_MAGBIO Magnolia biondii HOM05D007678 ORTHO05D009658 1.3e-61 240.7 237 59.1
Sabra01G0023800 Salix brachista HOM05D007678 ORTHO05D009658 3.8e-61 239.2 256 56.6
Oeu044217.3 Olea europaea HOM05D007678 ORTHO05D009658 6.5e-61 238.4 249 55.0
Thecc.10G137600 Theobroma cacao HOM05D007678 ORTHO05D009658 6.5e-61 238.4 223 61.0
HanXRQChr12g0376111 Helianthus annuus HOM05D007678 ORTHO05D009658 1.4e-60 237.3 226 60.2
Gohir.D10G198600 Gossypium hirsutum HOM05D007678 ORTHO05D009658 2.5e-60 236.5 216 61.6
PGSC0003DMG401028118 Solanum tuberosum HOM05D007678 ORTHO05D009658 3.2e-60 236.1 240 56.2
Solyc10g081280.2 Solanum lycopersicum HOM05D007678 ORTHO05D009658 4.2e-60 235.7 218 59.6
Sopen10g031780 Solanum pennellii HOM05D007678 ORTHO05D009658 9.4e-60 234.6 218 59.6
SalBow6G2419 Salvia bowleyana HOM05D007678 ORTHO05D009658 1.6e-59 233.8 219 58.4
TWI38G1059 Tripterygium wilfordii HOM05D007678 ORTHO05D009658 1.6e-59 233.8 238 58.8
Gorai.011G222500 Gossypium raimondii HOM05D007678 ORTHO05D009658 2.1e-59 233.4 216 60.6
ECA248G0545 Erigeron canadensis HOM05D007678 ORTHO05D009658 4.7e-59 232.3 222 59.0
Manes.04G155050 Manihot esculenta HOM05D007678 ORTHO05D009658 1.8e-58 230.3 294 50.7
Sed0019894 Sechium edule HOM05D000001 ORTHO05D000003 6.7e-58 228.4 222 59.5
DCAR_001914 Daucus carota HOM05D007678 ORTHO05D009658 1.1e-57 227.6 236 54.7
QL04p022035 Quercus lobata HOM05D007678 ORTHO05D009658 1.1e-57 227.6 194 63.4
MELO3C034052.2 Cucumis melo HOM05D007678 ORTHO05D009658 2.6e-57 226.5 229 57.6
vmacro20847 Vaccinium macrocarpon HOM05D007678 ORTHO05D009658 5.7e-57 225.3 242 54.1
ATR0307G037 Amborella trichopoda HOM05D007678 ORTHO05D009658 3.7e-56 222.6 222 54.5
COL.COLO4_04659 Corchorus olitorius HOM05D007678 ORTHO05D009658 3.7e-56 222.6 238 55.5
Eucgr.G03196 Eucalyptus grandis HOM05D007678 ORTHO05D009658 6.3e-56 221.9 222 58.1
PGR031G1114 Punica granatum HOM05D007678 ORTHO05D009658 8.2e-56 221.5 223 57.8
arahy.Tifrunner.gnm1.ann1.1DGF2A Arachis hypogaea HOM05D007678 ORTHO05D009658 2.4e-55 219.9 119 90.8
Ah.12g064780 Amaranthus hybridus HOM05D007678 ORTHO05D009658 4.1e-55 219.2 224 57.6
Lsat_1_v5_gn_7_114920 Lactuca sativa HOM05D007678 ORTHO05D009658 4.1e-55 219.2 241 55.2
Migut.J01589 Erythranthe guttata HOM05D007678 ORTHO05D009658 1.5e-54 217.2 218 54.6
VMungo1383G0210 Vigna mungo HOM05D000430 ORTHO05D009658 4.5e-54 215.7 142 79.6
Hund13420 Selenicereus undatus HOM05D007678 ORTHO05D009658 6.5e-53 211.8 247 51.4
Peaxi162Scf00153g00057 Petunia axillaris HOM05D007678 ORTHO05D009658 1.4e-52 210.7 199 59.8
Gohir.A10G190900 Gossypium hirsutum HOM05D007678 ORTHO05D009658 1.9e-52 210.3 199 60.3
Sc10g0003150 Simmondsia chinensis HOM05D007678 ORTHO05D009658 1.9e-52 210.3 242 51.7
CAN.G128.118 Capsicum annuum HOM05D001269 ORTHO05D001083 2.5e-52 209.9 195 59.5
CiPaw.14G011000 Carya illinoinensis HOM05D007678 ORTHO05D009658 5.5e-52 208.8 153 70.6
EL10Ac2g02701 Beta vulgaris HOM05D007678 ORTHO05D009658 9.4e-52 208.0 225 53.8
Nitab4.5_0008005g0010 Nicotiana tabacum HOM05D007678 ORTHO05D009658 8.0e-51 204.9 188 60.1
unitig_37.g12769 Utricularia gibba HOM05D007678 ORTHO05D009658 8.0e-51 204.9 213 53.1
HPP92_018248 Vanilla planifolia HOM05D007678 ORTHO05D009658 5.2e-50 202.2 228 48.7
CDE09G0612 Ceratophyllum demersum HOM05D007678 ORTHO05D009658 2.8e-48 196.4 179 59.8
arahy.Tifrunner.gnm1.ann1.NH3ZAS Arachis hypogaea HOM05D007678 ORTHO05D009658 3.7e-48 196.1 134 94.0
Zm00001eb303400 Zea mays HOM05D007678 ORTHO05D009658 1.8e-47 193.7 208 51.9
Rhsim01G0121700 Rhododendron simsii HOM05D007678 ORTHO05D009658 2.0e-46 190.3 149 65.8
Nitab4.5_0000062g0570 Nicotiana tabacum HOM05D007678 ORTHO05D009658 3.5e-46 189.5 198 54.5
CsaV3_5G029470 Cucumis sativus L. HOM05D007678 ORTHO05D000003 1.3e-45 187.6 167 62.9
AUR62031676 Chenopodium quinoa HOM05D007678 ORTHO05D009658 2.1e-43 180.3 144 63.9
Mapoly0003s0067 Marchantia polymorpha HOM05D007678 ORTHO05D009658 2.8e-40 169.9 212 42.5
CANSAT56G0191 Cannabis sativa HOM05D007678 ORTHO05D009658 7.0e-39 165.2 128 66.4
CBR_g30334 Chara braunii HOM05D007678 ORTHO05D009658 2.7e-38 163.3 222 40.5
arahy.Tifrunner.gnm1.ann1.78M82M Arachis hypogaea HOM05D007678 ORTHO05D009658 3.5e-38 162.9 103 82.5
TPR.G4277 Trifolium pratense HOM05D007678 ORTHO05D009658 7.7e-38 161.8 141 66.7
Pp3c18_7980 Physcomitrium patens HOM05D007678 ORTHO05D009658 1.1e-36 157.9 212 40.1
TPR.G8973 Trifolium pratense HOM05D007678 ORTHO05D009658 5.5e-36 155.6 99 81.8
Phvul.008G043200 Phaseolus vulgaris HOM05D007678 ORTHO05D009658 3.4e-33 146.4 144 61.1
Cpa.g.sc33.162 Carica papaya HOM05D007678 ORTHO05D009658 2.2e-32 143.7 96 78.1
SMO174G0167 Selaginella moellendorffii HOM05D007678 ORTHO05D009658 4.8e-32 142.5 189 42.3
Cc06_g20600 Coffea canephora HOM05D007678 ORTHO05D009658 1.6e-27 127.5 154 50.6
arahy.Tifrunner.gnm1.ann1.6E2HM0 Arachis hypogaea HOM05D007678 ORTHO05D009658 1.2e-25 121.3 63 93.7
QL04p021970 Quercus lobata HOM05D007678 ORTHO05D009658 2.2e-24 117.1 113 58.4
Lsat_1_v5_gn_5_155661 Lactuca sativa HOM05D007678 ORTHO05D009658 9.2e-23 111.7 213 39.4
Cc06_g20610 Coffea canephora HOM05D007678 ORTHO05D009658 1.3e-21 107.8 85 58.8
arahy.Tifrunner.gnm1.ann1.BX3238 Arachis hypogaea HOM05D007678 ORTHO05D009658 2.8e-19 100.1 89 69.7
PRCOL_00006709 Prasinoderma coloniale HOM05D007678 ORTHO05D009658 4.7e-19 99.4 198 31.8
MCO01G505 Micromonas commoda HOM05D007678 ORTHO05D009658 6.8e-18 95.5 191 28.3
CSS0047660 Camellia sinensis var. sinensis HOM05D007678 ORTHO05D009658 1.2e-14 84.7 61 68.9
QL04p021975 Quercus lobata HOM05D007678 ORTHO05D009658 1.6e-14 84.3 58 72.4
FAN03G1326 Fragaria x ananassa HOM05D001392 ORTHO05D006407 2.1e-11 73.9 76 56.6
arahy.Tifrunner.gnm1.ann1.MMNX5U Arachis hypogaea HOM05D000747 ORTHO05D009658 2.8e-11 73.6 52 78.8
GSVIVG01012452001 Vitis vinifera HOM05D007678 ORTHO05D009658 5.8e-09 65.9 85 47.1
QL02p047964 Quercus lobata HOM05D007678 ORTHO05D009658 4.6e-06 56.2 49 63.3
arahy.Tifrunner.gnm1.ann1.Q44M57 Arachis hypogaea HOM05D006052 ORTHO05D007319 6.0e-06 55.8 30 86.7


User provided reference genes

Program Settings