Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.4JR04K Arachis hypogaea HOM05D004197 ORTHO05D004975 2.1e-64 248.8 119 100.0
arahy.Tifrunner.gnm1.ann1.5DCW4K Arachis hypogaea HOM05D004197 ORTHO05D004975 2.1e-64 248.8 119 100.0
arahy.Tifrunner.gnm1.ann1.E9H45Q Arachis hypogaea HOM05D004197 ORTHO05D004975 2.1e-64 248.8 119 100.0
Glyma.17G164900 Glycine max HOM05D004197 ORTHO05D004975 9.9e-59 229.9 119 89.9
VMungo0251G3068 Vigna mungo HOM05D004197 ORTHO05D004975 1.7e-58 229.2 119 89.9
CiPaw.11G096400 Carya illinoinensis HOM05D004197 ORTHO05D004975 1.1e-57 226.5 119 88.2
Glyma.05G102000 Glycine max HOM05D004197 ORTHO05D004975 1.1e-57 226.5 119 89.1
Phvul.003G238300 Phaseolus vulgaris HOM05D004197 ORTHO05D004975 1.1e-57 226.5 119 88.2
Eucgr.G02225 Eucalyptus grandis HOM05D004197 ORTHO05D004975 1.4e-57 226.1 119 88.2
GSVIVG01038138001 Vitis vinifera HOM05D004197 ORTHO05D004975 1.4e-57 226.1 118 90.7
Thecc.04G166300 Theobroma cacao HOM05D004197 ORTHO05D004975 1.9e-57 225.7 119 88.2
Duzib151G0052 Durio zibethinus HOM05D004197 ORTHO05D004975 5.4e-57 224.2 119 87.4
Gohir.A10G143100 Gossypium hirsutum HOM05D004197 ORTHO05D004975 5.4e-57 224.2 119 87.4
Gorai.011G136700 Gossypium raimondii HOM05D004197 ORTHO05D004975 5.4e-57 224.2 119 87.4
Gorai.012G053000 Gossypium raimondii HOM05D004197 ORTHO05D004975 5.4e-57 224.2 119 87.4
Atru.chr12.1293 Acer truncatum HOM05D004197 ORTHO05D004975 9.3e-57 223.4 119 86.6
Gohir.A05G367700 Gossypium hirsutum HOM05D004197 ORTHO05D004975 1.6e-56 222.6 119 86.6
Gohir.D10G123800 Gossypium hirsutum HOM05D004197 ORTHO05D004975 2.1e-56 222.2 119 86.6
Duzib212G0574 Durio zibethinus HOM05D004197 ORTHO05D004975 2.7e-56 221.9 119 87.4
Gohir.D04G047600 Gossypium hirsutum HOM05D004197 ORTHO05D004975 2.7e-56 221.9 119 86.6
Hma1.2p1_0307F.1_g119895 Hydrangea macrophylla HOM05D004197 ORTHO05D004975 2.7e-56 221.9 119 86.6
Atru.chr4.2919 Acer truncatum HOM05D004197 ORTHO05D004975 6.0e-56 220.7 119 85.7
CSS0039414 Camellia sinensis var. sinensis HOM05D004197 ORTHO05D004975 6.0e-56 220.7 119 85.7
CSS0047181 Camellia sinensis var. sinensis HOM05D004197 ORTHO05D004975 6.0e-56 220.7 119 85.7
Lalb_Chr04g0253841 Lupinus albus HOM05D004197 ORTHO05D004975 6.0e-56 220.7 119 86.6
QL10p055721 Quercus lobata HOM05D004197 ORTHO05D004975 7.8e-56 220.3 119 86.6
TWI32G1250 Tripterygium wilfordii HOM05D004197 ORTHO05D004975 7.8e-56 220.3 119 84.9
ATR0733G162 Amborella trichopoda HOM05D004197 ORTHO05D004975 1.0e-55 219.9 119 86.6
Cfa015042 Carpinus fangiana HOM05D004197 ORTHO05D004975 1.0e-55 219.9 119 84.9
Ca_23424_v3 Cicer arietinum L. HOM05D004197 ORTHO05D004975 1.0e-55 219.9 119 87.4
PGR142G4086 Punica granatum HOM05D004197 ORTHO05D004975 1.0e-55 219.9 117 88.0
Sed0002539 Sechium edule HOM05D004197 ORTHO05D004975 1.3e-55 219.5 119 86.6
Dinv33200 Davidia involucrata HOM05D004197 ORTHO05D004975 1.7e-55 219.2 119 87.4
CiPaw.12G066300 Carya illinoinensis HOM05D004197 ORTHO05D004975 2.3e-55 218.8 119 84.0
HPP92_007604 Vanilla planifolia HOM05D004197 ORTHO05D004975 2.3e-55 218.8 119 84.9
Psat1g223520 Pisum sativum HOM05D004197 ORTHO05D004975 3.0e-55 218.4 119 84.0
CARHR170020 Cardamine hirsuta HOM05D004197 ORTHO05D004975 3.9e-55 218.0 119 84.0
Aa31LG10G13940 Aethionema arabicum HOM05D004197 ORTHO05D004975 5.1e-55 217.6 119 84.0
AL5G41720 Arabidopsis lyrata HOM05D004197 ORTHO05D004975 5.1e-55 217.6 119 84.0
Carub.0005s2637 Capsella rubella HOM05D004197 ORTHO05D004975 5.1e-55 217.6 119 84.0
Phvul.010G124900 Phaseolus vulgaris HOM05D004197 ORTHO05D004975 5.1e-55 217.6 111 91.9
AT3G59650 Arabidopsis thaliana HOM05D004197 ORTHO05D004975 6.6e-55 217.2 119 83.2
CDE02G1869 Ceratophyllum demersum HOM05D004197 ORTHO05D004975 6.6e-55 217.2 119 82.4
Lj1g0017974 Lotus japonicus HOM05D004197 ORTHO05D004975 8.7e-55 216.9 119 85.7
Lalb_Chr10g0101191 Lupinus albus HOM05D004197 ORTHO05D004975 8.7e-55 216.9 119 82.4
AUR62023799 Chenopodium quinoa HOM05D004197 ORTHO05D004975 1.1e-54 216.5 118 85.6
Ca_10539_v3 Cicer arietinum L. HOM05D004197 ORTHO05D004975 1.1e-54 216.5 119 84.9
Medtr8g022770 Medicago truncatula HOM05D004197 ORTHO05D004975 1.5e-54 216.1 119 84.0
Thhalv10006316m.g Eutrema salsugineum HOM05D004197 ORTHO05D004975 1.9e-54 215.7 119 84.0
Cpa.g.sc10.180 Carica papaya HOM05D004197 ORTHO05D004975 2.5e-54 215.3 119 84.0
Nn1g09691 Nelumbo nucifera HOM05D004197 ORTHO05D004975 2.5e-54 215.3 118 83.9
Rhsim03G0176800 Rhododendron simsii HOM05D004197 ORTHO05D004975 2.5e-54 215.3 119 84.0
BcaC07g40496 Brassica carinata HOM05D004197 ORTHO05D004975 5.6e-54 214.2 119 83.2
A09p51920 Brassica napus HOM05D004197 ORTHO05D004975 5.6e-54 214.2 119 83.2
C08p34650 Brassica napus HOM05D004197 ORTHO05D004975 5.6e-54 214.2 119 83.2
BolC8t51067H Brassica oleracea HOM05D004197 ORTHO05D004975 5.6e-54 214.2 119 83.2
BraA09t40628Z Brassica rapa HOM05D004197 ORTHO05D004975 5.6e-54 214.2 119 83.2
Ah.13g073520 Amaranthus hybridus HOM05D004197 ORTHO05D004975 7.3e-54 213.8 118 83.9
BcaC08g44998 Brassica carinata HOM05D004197 ORTHO05D004975 7.3e-54 213.8 119 83.2
A07p24720 Brassica napus HOM05D000455 ORTHO05D000434 7.3e-54 213.8 119 83.2
C06p26290 Brassica napus HOM05D000455 ORTHO05D000434 7.3e-54 213.8 119 83.2
BolC6t37793H Brassica oleracea HOM05D004197 ORTHO05D004975 7.3e-54 213.8 119 83.2
BraA07t30117Z Brassica rapa HOM05D004197 ORTHO05D004975 7.3e-54 213.8 119 83.2
Prupe.1G206900 Prunus persica HOM05D004197 ORTHO05D004975 7.3e-54 213.8 119 83.2
Sp5g03530 Schrenkiella parvula HOM05D004197 ORTHO05D004975 7.3e-54 213.8 119 83.2
BcaB02g07455 Brassica carinata HOM05D004197 ORTHO05D004975 9.6e-54 213.4 119 83.2
TPR.G16667 Trifolium pratense HOM05D004197 ORTHO05D004975 1.3e-53 213.0 119 82.4
Psat4g166320 Pisum sativum HOM05D004197 ORTHO05D004975 2.8e-53 211.8 118 81.4
EL10Ac6g15364 Beta vulgaris HOM05D004197 ORTHO05D004975 3.6e-53 211.5 118 82.2
Aqoxy7G00569 Aquilegia oxysepala HOM05D004197 ORTHO05D004975 4.8e-53 211.1 119 81.5
Ciclev10022904m.g Citrus clementina HOM05D004197 ORTHO05D004975 6.2e-53 210.7 119 81.5
PSO832G1844 Papaver somniferum HOM05D004197 ORTHO05D004975 1.4e-52 209.5 119 81.5
TWI34G1638 Tripterygium wilfordii HOM05D004197 ORTHO05D004975 1.4e-52 209.5 143 72.7
ClCG07G015230 Citrullus lanatus HOM05D004197 ORTHO05D004975 1.8e-52 209.1 119 80.7
FvH4_7g06200 Fragaria vesca HOM05D004197 ORTHO05D004975 2.4e-52 208.8 119 81.5
Os03g0207250 Oryza sativa ssp. japonica HOM05D004197 ORTHO05D004975 2.4e-52 208.8 118 80.5
CAN.G525.23 Capsicum annuum HOM05D004197 ORTHO05D004975 3.1e-52 208.4 118 81.4
RcHm_v2.0_Chr1g0333831 Rosa chinensis HOM05D004197 ORTHO05D004975 3.1e-52 208.4 119 80.7
MELO3C017759.2 Cucumis melo HOM05D004197 ORTHO05D004975 5.3e-52 207.6 119 79.8
CsaV3_4G002820 Cucumis sativus L. HOM05D004197 ORTHO05D004975 5.3e-52 207.6 119 79.0
Hund04335 Selenicereus undatus HOM05D004197 ORTHO05D004975 5.3e-52 207.6 118 81.4
FAN01G1948 Fragaria x ananassa HOM05D004197 ORTHO05D004975 6.9e-52 207.2 119 80.7
FAN06G1493 Fragaria x ananassa HOM05D004197 ORTHO05D004975 6.9e-52 207.2 119 80.7
Manes.06G021100 Manihot esculenta HOM05D004197 ORTHO05D004975 9.0e-52 206.8 119 80.7
Peaxi162Scf00196g00222 Petunia axillaris HOM05D004197 ORTHO05D004975 9.0e-52 206.8 118 80.5
EL10Ac3g06082 Beta vulgaris HOM05D004197 ORTHO05D004975 1.2e-51 206.5 118 80.5
Sp2g07880 Schrenkiella parvula HOM05D004197 ORTHO05D004975 1.2e-51 206.5 119 80.7
FAN03G3355 Fragaria x ananassa HOM05D004197 ORTHO05D004975 1.5e-51 206.1 119 79.8
CANSAT80G2644 Cannabis sativa HOM05D004197 ORTHO05D004975 2.0e-51 205.7 119 79.8
PSO017G5565 Papaver somniferum HOM05D004197 ORTHO05D004975 2.0e-51 205.7 119 79.8
PSO675G0737 Papaver somniferum HOM05D004197 ORTHO05D004975 2.0e-51 205.7 119 79.8
THA.LOC104804007 Tarenaya hassleriana HOM05D004197 ORTHO05D004975 2.6e-51 205.3 118 80.5
arahy.Tifrunner.gnm1.ann1.XY21PC Arachis hypogaea HOM05D004197 ORTHO05D004975 3.4e-51 204.9 130 79.2
Oeu016610.1 Olea europaea HOM05D004197 ORTHO05D004975 3.4e-51 204.9 118 81.4
TAR362G0244 Trochodendron aralioides HOM05D000090 ORTHO05D001584 3.4e-51 204.9 111 86.5
Nitab4.5_0007872g0010 Nicotiana tabacum HOM05D004197 ORTHO05D004975 4.4e-51 204.5 118 78.8
Zm00001eb400580 Zea mays HOM05D004197 ORTHO05D004975 5.8e-51 204.1 118 78.8
Solyc04g014390.3 Solanum lycopersicum HOM05D004197 ORTHO05D004975 9.9e-51 203.4 117 80.3
Sopen04g006520 Solanum pennellii HOM05D004197 ORTHO05D004975 9.9e-51 203.4 117 80.3
Migut.F01587 Erythranthe guttata HOM05D004197 ORTHO05D004975 1.3e-50 203.0 118 80.5
SalBow6G6028 Salvia bowleyana HOM05D004197 ORTHO05D004975 1.7e-50 202.6 118 80.5
Nitab4.5_0000902g0310 Nicotiana tabacum HOM05D004197 ORTHO05D004975 2.2e-50 202.2 118 78.0
Potri.013G126200 Populus trichocarpa HOM05D004197 ORTHO05D004975 2.2e-50 202.2 119 79.0
QL04p073242 Quercus lobata HOM05D004197 ORTHO05D004975 2.2e-50 202.2 119 79.0
PSO591G0183 Papaver somniferum HOM05D004197 ORTHO05D004975 3.8e-50 201.4 119 77.3
MD08G1230600 Malus domestica HOM05D004197 ORTHO05D004975 4.9e-50 201.1 116 78.4
CDE09G0571 Ceratophyllum demersum HOM05D004197 ORTHO05D004975 8.4e-50 200.3 110 82.7
PGSC0003DMG401023624 Solanum tuberosum HOM05D004197 ORTHO05D004975 1.4e-49 199.5 117 79.5
TAR629G0957 Trochodendron aralioides HOM05D004197 ORTHO05D004975 1.4e-49 199.5 110 86.4
HanXRQChr10g0286001 Helianthus annuus HOM05D004197 ORTHO05D004975 1.9e-49 199.1 118 80.5
MSTRG.27564 Avicennia marina HOM05D004197 ORTHO05D004975 3.2e-49 198.4 118 78.8
Cc02_g26370 Coffea canephora HOM05D004197 ORTHO05D004975 3.2e-49 198.4 118 78.8
Lsat_1_v5_gn_6_33001 Lactuca sativa HOM05D004197 ORTHO05D004975 3.2e-49 198.4 118 81.4
ECA240G1468 Erigeron canadensis HOM05D004197 ORTHO05D004975 5.4e-49 197.6 118 78.8
Actinidia11444 Actinidia chinensis HOM05D005056 ORTHO05D006487 1.2e-48 196.4 110 80.9
unitig_899.g14470 Utricularia gibba HOM05D004197 ORTHO05D004975 1.2e-48 196.4 119 75.6
ECA247G1539 Erigeron canadensis HOM05D004197 ORTHO05D004975 1.6e-48 196.1 115 80.9
Lsat_1_v5_gn_5_190681 Lactuca sativa HOM05D004197 ORTHO05D004975 7.9e-48 193.7 118 78.8
Cc03_g14030 Coffea canephora HOM05D004197 ORTHO05D004975 6.6e-47 190.7 118 78.0
FAN24G1973 Fragaria x ananassa HOM05D004197 ORTHO05D004975 9.6e-46 186.8 110 80.0
FvH4_2g13530 Fragaria vesca HOM05D004197 ORTHO05D004975 2.1e-45 185.7 112 79.5
QL04p093649 Quercus lobata HOM05D004197 ORTHO05D004975 4.8e-45 184.5 111 77.5
arahy.Tifrunner.gnm1.ann1.60591L Arachis hypogaea HOM05D004197 ORTHO05D004975 3.1e-44 181.8 135 74.1
TAR493G0004 Trochodendron aralioides HOM05D004197 ORTHO05D004975 9.0e-44 180.3 106 83.0
SGA_v2.0_scaffold49G18240 Striga asiatica HOM05D004197 ORTHO05D004975 1.3e-42 176.4 110 77.3
Gorai.004G083000 Gossypium raimondii HOM05D004197 ORTHO05D004975 1.1e-41 173.3 94 86.2
AUR62002389 Chenopodium quinoa HOM05D004197 ORTHO05D004975 3.2e-41 171.8 211 46.9
SEGI_18755 Sequoiadendron giganteum HOM05D004197 ORTHO05D004975 7.1e-41 170.6 118 65.3
C04p24770 Brassica napus HOM05D004197 ORTHO05D004975 1.6e-40 169.5 110 77.3
BolC4t23981H Brassica oleracea HOM05D004197 ORTHO05D004975 1.6e-40 169.5 110 77.3
BcaC02g10824 Brassica carinata HOM05D004197 ORTHO05D004975 1.3e-39 166.4 110 76.4
MBI11_g23942_MAGBIO Magnolia biondii HOM05D004197 ORTHO05D004975 2.3e-39 165.6 94 83.0
Gohir.D08G078000 Gossypium hirsutum HOM05D004197 ORTHO05D004975 3.9e-39 164.9 92 83.7
Lj3g0000340 Lotus japonicus HOM05D004197 ORTHO05D004975 3.9e-39 164.9 123 66.7
Mapoly0027s0066 Marchantia polymorpha HOM05D004197 ORTHO05D004975 3.9e-39 164.9 119 64.7
Gohir.D10G075200 Gossypium hirsutum HOM05D004197 ORTHO05D004975 5.1e-39 164.5 90 84.4
Gohir.D02G135200 Gossypium hirsutum HOM05D004197 ORTHO05D004975 3.3e-38 161.8 90 83.3
Atru.chr12.1301 Acer truncatum HOM05D004197 ORTHO05D004975 5.6e-38 161.0 90 82.2
Atru.chr12.1273 Acer truncatum HOM05D004197 ORTHO05D004975 1.6e-37 159.5 92 80.4
Gorai.011G081000 Gossypium raimondii HOM05D004197 ORTHO05D004975 1.6e-37 159.5 90 83.3
Gorai.005G151300 Gossypium raimondii HOM05D004197 ORTHO05D004975 8.1e-37 157.1 90 80.0
SHI24203 Sapria himalayana HOM05D004197 ORTHO05D004975 4.5e-35 151.4 133 54.9
Sabra13G0105500 Salix brachista HOM05D004197 ORTHO05D004975 7.6e-35 150.6 168 50.0
Rhsim02G0084000 Rhododendron simsii HOM05D004197 ORTHO05D004975 1.0e-34 150.2 86 79.1
Zm00001eb007240 Zea mays HOM05D004197 ORTHO05D004975 1.7e-34 149.4 89 76.4
Pp3c1_20100 Physcomitrium patens HOM05D004197 ORTHO05D004975 3.8e-34 148.3 119 56.3
HanXRQChr09g0264591 Helianthus annuus HOM05D004197 ORTHO05D004975 8.4e-34 147.1 92 77.2
TPR.G31074 Trifolium pratense HOM05D004197 ORTHO05D006502 2.5e-33 145.6 94 73.4
Peaxi162Scf00474g00723 Petunia axillaris HOM05D004197 ORTHO05D004975 7.1e-33 144.1 118 61.0
SalBow2G3321 Salvia bowleyana HOM05D004197 ORTHO05D004975 1.6e-32 142.9 89 77.5
DCAR_029674 Daucus carota HOM05D004197 ORTHO05D004975 2.7e-32 142.1 89 73.0
Gohir.D08G220700 Gossypium hirsutum HOM05D004197 ORTHO05D004975 2.7e-32 142.1 76 88.2
CARHR099320 Cardamine hirsuta HOM05D004197 ORTHO05D004975 7.9e-32 140.6 82 78.0
DCAR_009572 Daucus carota HOM05D004197 ORTHO05D004975 1.3e-31 139.8 89 71.9
unitig_736.g22525 Utricularia gibba HOM05D000398 ORTHO05D000551 1.1e-30 136.7 86 72.1
arahy.Tifrunner.gnm1.ann1.GGUP18 Arachis hypogaea HOM05D004197 ORTHO05D004975 7.4e-30 134.0 62 100.0
COL.COLO4_08144 Corchorus olitorius HOM05D004197 ORTHO05D004975 6.9e-28 127.5 62 91.9
SMO347G0376 Selaginella moellendorffii HOM05D004197 ORTHO05D004975 2.6e-27 125.6 118 51.7
Hma1.2p1_0150F.1_g066800 Hydrangea macrophylla HOM05D004197 ORTHO05D004975 3.4e-27 125.2 62 91.9
Lsat_1_v5_gn_6_23540 Lactuca sativa HOM05D004197 ORTHO05D004975 2.2e-26 122.5 95 65.3
vmacro16589 Vaccinium macrocarpon HOM05D004197 ORTHO05D004975 5.0e-26 121.3 62 88.7
Glyma.07G044001 Glycine max HOM05D004197 ORTHO05D004975 7.2e-25 117.5 90 66.7
arahy.Tifrunner.gnm1.ann1.HJ8Q1I Arachis hypogaea HOM05D004197 ORTHO05D004975 1.9e-22 109.4 57 87.7
Gorai.004G076200 Gossypium raimondii HOM05D004197 ORTHO05D004975 9.7e-22 107.1 119 48.7
Cre06.g270650 Chlamydomonas reinhardtii HOM05D004197 ORTHO05D004975 2.8e-21 105.5 108 43.5
Lsat_1_v5_gn_2_131080 Lactuca sativa HOM05D004197 ORTHO05D004975 1.9e-17 92.8 82 61.0
MCO09G643 Micromonas commoda HOM05D004197 ORTHO05D004975 5.5e-17 91.3 115 38.3
Gohir.D04G172540 Gossypium hirsutum HOM05D004197 ORTHO05D004975 1.6e-16 89.7 61 68.9
Gorai.012G161800 Gossypium raimondii HOM05D004197 ORTHO05D004975 7.9e-16 87.4 61 67.2
Gorai.004G234500 Gossypium raimondii HOM05D004197 ORTHO05D004975 2.0e-14 82.8 56 69.6
Actinidia27110 Actinidia chinensis HOM05D004197 ORTHO05D004975 1.4e-12 76.6 44 81.8
arahy.Tifrunner.gnm1.ann1.HIJ85I Arachis hypogaea HOM05D004197 ORTHO05D087148 3.0e-07 58.9 31 90.3
Thecc.10G088100 Theobroma cacao HOM05D004197 ORTHO05D004975 5.7e-06 54.7 38 71.1


User provided reference genes

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