Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.E8J80R Arachis hypogaea HOM05D007192 ORTHO05D009034 3.4e-119 431.8 233 100.0
Phvul.003G083700 Phaseolus vulgaris HOM05D007192 ORTHO05D009034 2.4e-61 239.6 207 68.6
Lj4g0002454 Lotus japonicus HOM05D007192 ORTHO05D009034 7.9e-60 234.6 213 69.0
Glyma.07G265300 Glycine max HOM05D007192 ORTHO05D009034 6.7e-59 231.5 164 80.5
Glyma.17G008700 Glycine max HOM05D007192 ORTHO05D009034 4.8e-57 225.3 164 78.0
Medtr4g133070 Medicago truncatula HOM05D007192 ORTHO05D009034 8.4e-54 214.5 207 65.7
TPR.G37116 Trifolium pratense HOM05D007192 ORTHO05D009034 2.1e-52 209.9 211 63.0
VMungo1215G1962 Vigna mungo HOM05D007192 ORTHO05D009034 2.1e-52 209.9 148 82.4
Atru.chr1.2446 Acer truncatum HOM05D007192 ORTHO05D009034 2.1e-49 199.9 204 59.3
Prupe.4G010200 Prunus persica HOM05D007192 ORTHO05D009034 2.1e-49 199.9 207 58.9
QL05p069683 Quercus lobata HOM05D007192 ORTHO05D009034 2.0e-47 193.4 212 57.1
GSVIVG01003334001 Vitis vinifera HOM05D007192 ORTHO05D009034 7.6e-47 191.4 208 57.2
MD10G1331900 Malus domestica HOM05D007192 ORTHO05D009034 1.7e-46 190.3 209 57.9
MD05G1358000 Malus domestica HOM05D007192 ORTHO05D009034 3.8e-46 189.1 216 55.6
CANSAT56G2005 Cannabis sativa HOM05D007192 ORTHO05D009034 4.9e-46 188.7 211 57.8
Sed0016386 Sechium edule HOM05D007192 ORTHO05D009034 1.9e-45 186.8 204 56.4
Dinv13967 Davidia involucrata HOM05D001152 ORTHO05D000967 3.2e-45 186.0 208 52.9
Dinv07405 Davidia involucrata HOM05D007192 ORTHO05D009034 7.1e-45 184.9 215 50.7
Hma1.2p1_0657F.1_g197140 Hydrangea macrophylla HOM05D007192 ORTHO05D009034 7.1e-45 184.9 214 52.8
Nn1g07392 Nelumbo nucifera HOM05D007192 ORTHO05D009034 9.3e-45 184.5 213 57.7
Potri.016G013500 Populus trichocarpa HOM05D007192 ORTHO05D009034 1.2e-44 184.1 161 66.5
RcHm_v2.0_Chr5g0001481 Rosa chinensis HOM05D007192 ORTHO05D009034 4.6e-44 182.2 208 51.4
Sabra06G0008700 Salix brachista HOM05D007192 ORTHO05D009034 4.6e-44 182.2 164 65.9
Gohir.A06G205200 Gossypium hirsutum HOM05D007192 ORTHO05D009034 1.8e-43 180.3 164 68.3
Gohir.D06G216300 Gossypium hirsutum HOM05D007192 ORTHO05D009034 2.3e-43 179.9 164 68.3
Gorai.010G249900 Gossypium raimondii HOM05D007192 ORTHO05D009034 2.3e-43 179.9 164 68.3
Eucgr.E03926 Eucalyptus grandis HOM05D007192 ORTHO05D009034 3.9e-43 179.1 164 66.5
TWI38G0802 Tripterygium wilfordii HOM05D007192 ORTHO05D009034 3.9e-43 179.1 208 54.8
CiPaw.09G102500 Carya illinoinensis HOM05D007192 ORTHO05D009034 5.1e-43 178.7 209 51.2
Thecc.06G233600 Theobroma cacao HOM05D007192 ORTHO05D009034 5.1e-43 178.7 164 65.2
Ciclev10016735m.g Citrus clementina HOM05D007192 ORTHO05D009034 1.1e-42 177.6 164 65.2
ClCG01G021480 Citrullus lanatus HOM05D007192 ORTHO05D009034 1.5e-42 177.2 216 52.3
CsaV3_6G048500 Cucumis sativus L. HOM05D007192 ORTHO05D009034 1.9e-42 176.8 212 57.1
FvH4_3g00960 Fragaria vesca HOM05D007192 ORTHO05D009034 3.3e-42 176.0 205 50.7
TAR629G2173 Trochodendron aralioides HOM05D007192 ORTHO05D009034 4.3e-42 175.6 213 53.5
Lalb_Chr07g0176981 Lupinus albus HOM05D007192 ORTHO05D009034 1.3e-41 174.1 172 59.3
PGR042G3283 Punica granatum HOM05D007192 ORTHO05D009034 2.8e-41 172.9 164 60.4
PGSC0003DMG400013349 Solanum tuberosum HOM05D007192 ORTHO05D009034 6.3e-41 171.8 211 48.8
MELO3C007436.2 Cucumis melo HOM05D007192 ORTHO05D009034 9.0e-40 167.9 202 52.5
Solyc11g012280.2 Solanum lycopersicum HOM05D007192 ORTHO05D009034 1.2e-39 167.5 213 50.2
Haze_08662 Corylus avellana HOM05D007192 ORTHO05D009034 3.4e-39 166.0 215 52.1
Duzib235G0907 Durio zibethinus HOM05D007192 ORTHO05D009034 4.5e-39 165.6 212 50.9
Nitab4.5_0000143g0180 Nicotiana tabacum HOM05D007192 ORTHO05D009034 4.5e-39 165.6 213 51.2
Peaxi162Scf00352g00210 Petunia axillaris HOM05D007192 ORTHO05D009034 4.5e-39 165.6 212 48.6
Sopen11g007060 Solanum pennellii HOM05D007192 ORTHO05D009034 5.9e-39 165.2 213 48.4
Aqoxy2G00603 Aquilegia oxysepala HOM05D007192 ORTHO05D009034 5.0e-38 162.2 217 48.4
THA.LOC104799643 Tarenaya hassleriana HOM05D007192 ORTHO05D009034 6.5e-38 161.8 163 61.3
Oeu016820.1 Olea europaea HOM05D007192 ORTHO05D009034 1.9e-37 160.2 221 48.0
SalBow8G5140 Salvia bowleyana HOM05D007192 ORTHO05D009034 1.9e-37 160.2 196 51.5
Ah.14g087620 Amaranthus hybridus HOM05D007192 ORTHO05D009034 2.5e-37 159.8 208 53.4
Hma1.2p1_0657F.1_g197150 Hydrangea macrophylla HOM05D007192 ORTHO05D009034 4.2e-37 159.1 270 41.9
Nitab4.5_0011595g0010 Nicotiana tabacum HOM05D007192 ORTHO05D009034 9.3e-37 157.9 213 48.8
Cfa000100 Carpinus fangiana HOM05D007192 ORTHO05D009034 4.6e-36 155.6 148 64.2
Psat4g005120 Pisum sativum HOM05D007192 ORTHO05D009034 2.3e-35 153.3 180 57.8
Sc24g0000280 Simmondsia chinensis HOM05D007192 ORTHO05D009034 2.3e-35 153.3 155 61.3
FAN21G0227 Fragaria x ananassa HOM05D007192 ORTHO05D009034 7.4e-34 148.3 148 54.1
PSO541G1889 Papaver somniferum HOM05D007192 ORTHO05D009034 1.3e-33 147.5 169 59.8
Sp6g24270 Schrenkiella parvula HOM05D007192 ORTHO05D009034 1.3e-33 147.5 161 56.5
Hund23406 Selenicereus undatus HOM05D007192 ORTHO05D009034 1.7e-33 147.1 197 50.3
PSO675G6515 Papaver somniferum HOM05D007192 ORTHO05D009034 2.2e-33 146.7 200 54.0
Cc09_g00850 Coffea canephora HOM05D007192 ORTHO05D009034 3.7e-33 146.0 213 49.3
MSTRG.14611 Avicennia marina HOM05D007192 ORTHO05D009034 1.4e-32 144.1 165 52.1
CARHR192700 Cardamine hirsuta HOM05D007192 ORTHO05D009034 9.1e-32 141.4 205 48.8
CAN.G1186.41 Capsicum annuum HOM05D007192 ORTHO05D009034 3.4e-31 139.4 149 54.4
Thhalv10014703m.g Eutrema salsugineum HOM05D007192 ORTHO05D009034 4.5e-31 139.0 204 46.6
Lsat_1_v5_gn_0_23500 Lactuca sativa HOM05D007192 ORTHO05D009034 5.9e-31 138.7 164 52.4
Duzib192G0317 Durio zibethinus HOM05D007192 ORTHO05D009034 7.7e-31 138.3 150 54.7
HanXRQChr10g0285171 Helianthus annuus HOM05D007192 ORTHO05D009034 1.3e-30 137.5 208 45.7
Aa31LG2G11450 Aethionema arabicum HOM05D007192 ORTHO05D009034 3.8e-30 136.0 148 58.8
AT5G20130 Arabidopsis thaliana HOM05D007192 ORTHO05D009034 1.1e-29 134.4 204 46.6
BcaB05g22869 Brassica carinata HOM05D007192 ORTHO05D009034 1.4e-29 134.0 163 52.1
unitig_37.g12189 Utricularia gibba HOM05D007192 ORTHO05D009034 1.4e-29 134.0 212 42.9
Actinidia26860 Actinidia chinensis HOM05D007192 ORTHO05D009034 4.2e-29 132.5 112 73.2
ECA248G2945 Erigeron canadensis HOM05D007192 ORTHO05D009034 7.2e-29 131.7 181 49.2
BcaC03g13735 Brassica carinata HOM05D007192 ORTHO05D009034 1.2e-28 131.0 164 54.3
BolC2t07017H Brassica oleracea HOM05D007192 ORTHO05D009034 1.2e-28 131.0 164 54.3
CDE08G0359 Ceratophyllum demersum HOM05D007192 ORTHO05D009034 1.2e-28 131.0 219 43.8
Potri.006G010600 Populus trichocarpa HOM05D007192 ORTHO05D009034 3.6e-28 129.4 130 61.5
Carub.0006s1851 Capsella rubella HOM05D007192 ORTHO05D009034 4.7e-28 129.0 206 46.1
C03p11420 Brassica napus HOM05D007192 ORTHO05D009034 6.1e-28 128.6 163 52.8
CDE06G1445 Ceratophyllum demersum HOM05D007060 ORTHO05D009087 6.1e-28 128.6 164 48.2
Manes.09G076800 Manihot esculenta HOM05D007192 ORTHO05D009034 6.1e-28 128.6 178 53.9
A03p09840 Brassica napus HOM05D007192 ORTHO05D009034 7.9e-28 128.3 162 53.1
BraA03t10299Z Brassica rapa HOM05D007192 ORTHO05D009034 7.9e-28 128.3 162 53.1
AL6G31680 Arabidopsis lyrata HOM05D007192 ORTHO05D009034 1.8e-27 127.1 200 46.5
BNapus_Darmor_BZH_scaffold_38p01780 Brassica napus HOM05D007192 ORTHO05D009034 5.1e-27 125.6 164 51.8
BraA02t05557Z Brassica rapa HOM05D007192 ORTHO05D009034 5.1e-27 125.6 164 51.8
Rhsim02G0145900 Rhododendron simsii HOM05D007192 ORTHO05D009034 5.1e-27 125.6 165 46.7
DCAR_004888 Daucus carota HOM05D007192 ORTHO05D009034 6.7e-27 125.2 211 47.9
ATR0776G058 Amborella trichopoda HOM05D007192 ORTHO05D009034 1.5e-26 124.0 159 52.8
HPP92_000005 Vanilla planifolia HOM05D007192 ORTHO05D009034 2.0e-26 123.6 182 42.9
vmacro03641 Vaccinium macrocarpon HOM05D007192 ORTHO05D009034 9.1e-24 114.8 153 43.8
Lj2A261T34 Lonicera japonica HOM05D007192 ORTHO05D009034 4.5e-23 112.5 160 54.4
FAN25G1082 Fragaria x ananassa HOM05D007192 ORTHO05D009034 7.7e-23 111.7 130 48.5
Migut.M01397 Erythranthe guttata HOM05D007192 ORTHO05D009034 1.8e-19 100.5 139 53.2
EL10Ac8g20192 Beta vulgaris HOM05D007192 ORTHO05D009034 3.0e-19 99.8 128 57.8
BcaB01g04801 Brassica carinata HOM05D007192 ORTHO05D009034 2.6e-15 86.7 160 36.2
BcaB01g04802 Brassica carinata HOM05D007192 ORTHO05D009034 2.6e-15 86.7 94 46.8
BolC3t13616H Brassica oleracea HOM05D007192 ORTHO05D009034 1.7e-14 84.0 138 37.7
SGA_v2.0_scaffold4G01874 Striga asiatica HOM05D007192 ORTHO05D009034 8.5e-14 81.6 138 49.3
SEGI_14587 Sequoiadendron giganteum HOM05D007192 ORTHO05D009034 3.2e-13 79.7 163 41.1
SEGI_15910 Sequoiadendron giganteum HOM05D007192 ORTHO05D009034 7.2e-13 78.6 150 42.7
Pp3c14_17130 Physcomitrium patens HOM05D007192 ORTHO05D009034 1.2e-10 71.2 173 39.3
COL.COLO4_31887 Corchorus olitorius HOM05D007192 ORTHO05D009034 1.3e-09 67.8 73 47.9
AUR62021857 Chenopodium quinoa HOM05D007192 ORTHO05D009034 1.1e-08 64.7 73 49.3
AagrBONN_evm.TU.Sc2ySwM_362.1438 Anthoceros agrestis HOM05D007192 ORTHO05D009034 9.1e-08 61.6 174 35.1
Mapoly0007s0283 Marchantia polymorpha HOM05D007192 ORTHO05D009034 5.9e-07 58.9 163 38.0
Mapoly0252s0005 Marchantia polymorpha HOM05D007192 ORTHO05D009034 5.9e-07 58.9 163 38.0


User provided reference genes

Program Settings