Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.E7EHDM Arachis hypogaea HOM05D036434 ORTHO05D085916 3.0e-54 214.9 109 100.0
arahy.Tifrunner.gnm1.ann1.03U3FR Arachis hypogaea HOM05D036434 ORTHO05D085949 2.0e-53 212.2 109 99.1
arahy.Tifrunner.gnm1.ann1.85SQRB Arachis hypogaea HOM05D036434 ORTHO05D087420 8.3e-28 127.1 109 67.0
arahy.Tifrunner.gnm1.ann1.1YQ32R Arachis hypogaea HOM05D004356 ORTHO05D005542 4.3e-16 88.2 65 75.4
arahy.Tifrunner.gnm1.ann1.D1TUAT Arachis hypogaea HOM05D004356 ORTHO05D005542 7.5e-13 77.4 59 72.9
arahy.Tifrunner.gnm1.ann1.JC6ZCB Arachis hypogaea HOM05D004356 ORTHO05D005542 2.2e-12 75.9 56 75.0
arahy.Tifrunner.gnm1.ann1.VLAW7V Arachis hypogaea HOM05D004356 ORTHO05D005542 2.2e-12 75.9 56 75.0
arahy.Tifrunner.gnm1.ann1.3Z7WCZ Arachis hypogaea HOM05D004356 ORTHO05D005542 2.9e-12 75.5 59 69.5
arahy.Tifrunner.gnm1.ann1.QY7301 Arachis hypogaea HOM05D004356 ORTHO05D005542 1.1e-11 73.6 56 73.2
Lalb_Chr10g0102631 Lupinus albus HOM05D004356 ORTHO05D005542 4.1e-11 71.6 56 67.9
arahy.Tifrunner.gnm1.ann1.L8UQBM Arachis hypogaea HOM05D004356 ORTHO05D005542 5.4e-11 71.2 56 69.6
Medtr5g065270 Medicago truncatula HOM05D004356 ORTHO05D005542 4.6e-10 68.2 56 64.3
Phvul.008G178500 Phaseolus vulgaris HOM05D004356 ORTHO05D005542 4.6e-10 68.2 56 64.3
TPR.G16206 Trifolium pratense HOM05D004356 ORTHO05D005542 4.6e-10 68.2 56 66.1
Glyma.02G211300 Glycine max HOM05D004356 ORTHO05D005542 6.0e-10 67.8 56 64.3
Psat2g068800 Pisum sativum HOM05D004356 ORTHO05D005542 7.8e-10 67.4 56 66.1
TPR.G30120 Trifolium pratense HOM05D004356 ORTHO05D005542 7.8e-10 67.4 56 64.3
Glyma.14G178900 Glycine max HOM05D004356 ORTHO05D005542 1.3e-09 66.6 56 64.3
Lj1g0019049 Lotus japonicus HOM05D004356 ORTHO05D005542 6.6e-09 64.3 56 64.3
Lj1g0006758 Lotus japonicus HOM05D004356 ORTHO05D005542 1.5e-08 63.2 54 63.0
Ca_19032_v3 Cicer arietinum L. HOM05D004356 ORTHO05D005542 2.5e-08 62.4 56 60.7
Atru.chr13.1064 Acer truncatum HOM05D004356 ORTHO05D005542 4.3e-08 61.6 56 51.8
Atru.chr13.1070 Acer truncatum HOM05D004356 ORTHO05D005542 4.3e-08 61.6 56 51.8
Haze_22357 Corylus avellana HOM05D004356 ORTHO05D005542 4.3e-08 61.6 56 58.9
PGR102G1623 Punica granatum HOM05D004356 ORTHO05D005542 5.6e-08 61.2 56 58.9
Zm00001eb284720 Zea mays HOM05D004356 ORTHO05D005542 5.6e-08 61.2 53 58.5
CiPaw.16G056200 Carya illinoinensis HOM05D004356 ORTHO05D005542 7.3e-08 60.8 56 58.9
MD00G1136500 Malus domestica HOM05D004356 ORTHO05D005542 7.3e-08 60.8 54 57.4
MD15G1379800 Malus domestica HOM05D004356 ORTHO05D005542 9.5e-08 60.5 54 57.4
VMungo0647G1889 Vigna mungo HOM05D004356 ORTHO05D005542 9.5e-08 60.5 56 58.9
Duzib106G0787 Durio zibethinus HOM05D004356 ORTHO05D005542 2.1e-07 59.3 56 55.4
Ciclev10001304m.g Citrus clementina HOM05D004356 ORTHO05D005542 3.6e-07 58.5 56 51.8
FvH4_5g36000 Fragaria vesca HOM05D004356 ORTHO05D005542 4.7e-07 58.2 56 57.1
FAN04G0906 Fragaria x ananassa HOM05D004356 ORTHO05D005542 4.7e-07 58.2 56 57.1
FAN08G0112 Fragaria x ananassa HOM05D004356 ORTHO05D005542 4.7e-07 58.2 56 57.1
FAN18G3440 Fragaria x ananassa HOM05D004356 ORTHO05D005542 4.7e-07 58.2 56 57.1
Gohir.A05G222100 Gossypium hirsutum HOM05D004356 ORTHO05D005542 4.7e-07 58.2 56 55.4
CANSAT21G1617 Cannabis sativa HOM05D004356 ORTHO05D005542 6.2e-07 57.8 56 53.6
MELO3C011060.2 Cucumis melo HOM05D004356 ORTHO05D005542 6.2e-07 57.8 56 57.1
Thecc.08G065800 Theobroma cacao HOM05D004356 ORTHO05D005542 6.2e-07 57.8 56 53.6
Cfa013712 Carpinus fangiana HOM05D004356 ORTHO05D005542 8.0e-07 57.4 56 53.6
COL.COLO4_11966 Corchorus olitorius HOM05D004356 ORTHO05D005542 8.0e-07 57.4 56 53.6
Gohir.D05G224800 Gossypium hirsutum HOM05D004356 ORTHO05D005542 1.1e-06 57.0 56 53.6
Os09g0467100 Oryza sativa ssp. japonica HOM05D004356 ORTHO05D005542 1.1e-06 57.0 53 54.7
QL09p016893 Quercus lobata HOM05D004356 ORTHO05D005542 1.1e-06 57.0 55 54.5
CsaV3_2G030020 Cucumis sativus L. HOM05D004356 ORTHO05D005542 1.4e-06 56.6 56 55.4
arahy.Tifrunner.gnm1.ann1.E3H3WY Arachis hypogaea HOM05D000075 ORTHO05D000073 1.8e-06 56.2 29 96.6
AUR62027839 Chenopodium quinoa HOM05D004356 ORTHO05D005542 1.8e-06 56.2 56 51.8
ClCG08G011430 Citrullus lanatus HOM05D004356 ORTHO05D005542 1.8e-06 56.2 56 57.1
Actinidia33114 Actinidia chinensis HOM05D004356 ORTHO05D005542 2.3e-06 55.8 56 53.6
arahy.Tifrunner.gnm1.ann1.J07EWC Arachis hypogaea HOM05D004356 ORTHO05D005542 2.3e-06 55.8 29 96.6
RcHm_v2.0_Chr1g0327751 Rosa chinensis HOM05D004356 ORTHO05D005542 2.3e-06 55.8 54 55.6
Duzib093G1902 Durio zibethinus HOM05D004356 ORTHO05D005542 3.1e-06 55.5 56 51.8
Gorai.009G232200 Gossypium raimondii HOM05D004356 ORTHO05D005542 3.1e-06 55.5 56 51.8
unitig_37.g12048 Utricularia gibba HOM05D004356 ORTHO05D005542 3.1e-06 55.5 54 48.1
Nn1g08495 Nelumbo nucifera HOM05D004356 ORTHO05D005542 5.2e-06 54.7 54 53.7
Sed0016629 Sechium edule HOM05D004356 ORTHO05D005542 5.2e-06 54.7 56 53.6
Ah.05g170540 Amaranthus hybridus HOM05D004356 ORTHO05D005542 6.8e-06 54.3 56 50.0
Hund16880 Selenicereus undatus HOM05D004356 ORTHO05D005542 6.8e-06 54.3 56 51.8
CSS0005507 Camellia sinensis var. sinensis HOM05D004356 ORTHO05D005542 8.9e-06 53.9 56 50.0
CSS0046210 Camellia sinensis var. sinensis HOM05D004356 ORTHO05D005542 8.9e-06 53.9 56 50.0
Prupe.1G526100 Prunus persica HOM05D004356 ORTHO05D005542 8.9e-06 53.9 54 53.7
TWI56G1415 Tripterygium wilfordii HOM05D004356 ORTHO05D005542 8.9e-06 53.9 56 53.6


User provided reference genes

Program Settings