Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.E2ZA7R Arachis hypogaea HOM05D004704 ORTHO05D005384 2.5e-91 339.0 194 100.0
arahy.Tifrunner.gnm1.ann1.EBKJ9L Arachis hypogaea HOM05D004704 ORTHO05D005384 3.7e-47 192.2 162 70.4
arahy.Tifrunner.gnm1.ann1.V1RFD3 Arachis hypogaea HOM05D004704 ORTHO05D005384 1.8e-33 146.7 228 44.3
arahy.Tifrunner.gnm1.ann1.UG6603 Arachis hypogaea HOM05D004704 ORTHO05D005384 4.4e-32 142.1 241 42.7
arahy.Tifrunner.gnm1.ann1.96JZXU Arachis hypogaea HOM05D004704 ORTHO05D005384 1.3e-31 140.6 71 98.6
arahy.Tifrunner.gnm1.ann1.IMTX5S Arachis hypogaea HOM05D004704 ORTHO05D005384 1.3e-31 140.6 69 100.0
arahy.Tifrunner.gnm1.ann1.7UF87C Arachis hypogaea HOM05D004704 ORTHO05D005384 4.9e-31 138.7 68 100.0
SalBow8G4518 Salvia bowleyana HOM05D004704 ORTHO05D005384 1.2e-26 124.0 69 85.5
COL.COLO4_31331 Corchorus olitorius HOM05D004704 ORTHO05D005384 2.8e-26 122.9 69 84.1
Peaxi162Scf00200g00121 Petunia axillaris HOM05D004704 ORTHO05D005384 3.6e-26 122.5 69 84.1
SalBow8G1161 Salvia bowleyana HOM05D004704 ORTHO05D005384 3.6e-26 122.5 69 84.1
Thecc.06G174000 Theobroma cacao HOM05D004704 ORTHO05D005384 3.6e-26 122.5 69 84.1
TWI38G0698 Tripterygium wilfordii HOM05D004704 ORTHO05D005384 3.6e-26 122.5 74 78.4
ECA236G1293 Erigeron canadensis HOM05D004704 ORTHO05D005384 4.7e-26 122.1 74 78.4
Duzib192G0914 Durio zibethinus HOM05D004704 ORTHO05D005384 8.1e-26 121.3 69 82.6
Lj1P1195T10 Lonicera japonica HOM05D004704 ORTHO05D005384 1.4e-25 120.6 69 82.6
Potri.004G054500 Populus trichocarpa HOM05D004704 ORTHO05D005384 1.8e-25 120.2 69 82.6
Lsat_1_v5_gn_7_23201 Lactuca sativa HOM05D004704 ORTHO05D005384 2.3e-25 119.8 74 75.7
Solyc03g006230.1 Solanum lycopersicum HOM05D004704 ORTHO05D005384 2.3e-25 119.8 74 78.4
PGSC0003DMG400018011 Solanum tuberosum HOM05D004704 ORTHO05D005384 2.3e-25 119.8 74 75.7
Sopen03g002240 Solanum pennellii HOM05D004704 ORTHO05D005384 4.0e-25 119.0 74 78.4
PGSC0003DMG400004386 Solanum tuberosum HOM05D004704 ORTHO05D005384 4.0e-25 119.0 74 77.0
Nitab4.5_0002076g0080 Nicotiana tabacum HOM05D004704 ORTHO05D005384 5.2e-25 118.6 69 79.7
Migut.M01052 Erythranthe guttata HOM05D004704 ORTHO05D005384 6.8e-25 118.2 69 79.7
Manes.17G053900 Manihot esculenta HOM05D004704 ORTHO05D005384 1.2e-24 117.5 69 79.7
Oeu041801.1 Olea europaea HOM05D004704 ORTHO05D005384 1.2e-24 117.5 69 76.8
Oeu041804.1 Olea europaea HOM05D004704 ORTHO05D005384 1.2e-24 117.5 69 76.8
DCAR_028021 Daucus carota HOM05D004704 ORTHO05D005384 2.0e-24 116.7 69 79.7
HanXRQChr04g0115831 Helianthus annuus HOM05D004704 ORTHO05D005384 2.0e-24 116.7 74 74.3
Nitab4.5_0001375g0020 Nicotiana tabacum HOM05D004704 ORTHO05D005384 2.0e-24 116.7 69 78.3
Oeu041796.1 Olea europaea HOM05D004704 ORTHO05D005384 2.6e-24 116.3 69 76.8
DCAR_004020 Daucus carota HOM05D004704 ORTHO05D005384 3.4e-24 115.9 74 73.0
Potri.011G064300 Populus trichocarpa HOM05D004704 ORTHO05D005384 3.4e-24 115.9 69 78.3
PGR004G2271 Punica granatum HOM05D004704 ORTHO05D005384 3.4e-24 115.9 69 78.3
PGR004G2343 Punica granatum HOM05D004704 ORTHO05D005384 3.4e-24 115.9 69 79.7
TAR629G2327 Trochodendron aralioides HOM05D004704 ORTHO05D005384 3.4e-24 115.9 69 79.7
Gorai.010G156000 Gossypium raimondii HOM05D004704 ORTHO05D005384 5.8e-24 115.2 69 78.3
Rhsim13G0106100 Rhododendron simsii HOM05D004704 ORTHO05D005384 5.8e-24 115.2 69 75.4
CiPaw.09G067900 Carya illinoinensis HOM05D004704 ORTHO05D005384 7.6e-24 114.8 74 73.0
DCAR_004019 Daucus carota HOM05D004704 ORTHO05D005384 7.6e-24 114.8 74 71.6
Sabra11G0045900 Salix brachista HOM05D004704 ORTHO05D005384 7.6e-24 114.8 69 75.4
TAR627G1161 Trochodendron aralioides HOM05D004704 ORTHO05D005384 7.6e-24 114.8 70 75.7
Cc02_g14600 Coffea canephora HOM05D004704 ORTHO05D005384 9.9e-24 114.4 69 78.3
TAR627G0020 Trochodendron aralioides HOM05D004704 ORTHO05D005384 9.9e-24 114.4 69 78.3
TAR706G0003 Trochodendron aralioides HOM05D004704 ORTHO05D005384 9.9e-24 114.4 69 78.3
Eucgr.D00532 Eucalyptus grandis HOM05D004704 ORTHO05D005384 1.7e-23 113.6 69 78.3
TAR627G1005 Trochodendron aralioides HOM05D004704 ORTHO05D005384 1.7e-23 113.6 69 78.3
CAN.G2115.3 Capsicum annuum HOM05D004704 ORTHO05D005384 2.2e-23 113.2 74 71.6
MBI06_g18005_MAGBIO Magnolia biondii HOM05D004704 ORTHO05D005384 2.2e-23 113.2 70 77.1
CSS0042208 Camellia sinensis var. sinensis HOM05D004704 ORTHO05D005384 2.9e-23 112.8 69 75.4
Manes.17G053800 Manihot esculenta HOM05D004704 ORTHO05D005384 2.9e-23 112.8 74 68.9
Gohir.D06G134300 Gossypium hirsutum HOM05D004704 ORTHO05D005384 3.8e-23 112.5 69 76.8
MBI06_g45390_MAGBIO Magnolia biondii HOM05D004704 ORTHO05D005384 6.4e-23 111.7 69 76.8
TAR629G2609 Trochodendron aralioides HOM05D004704 ORTHO05D005384 6.4e-23 111.7 69 76.8
PSO063G2883 Papaver somniferum HOM05D004704 ORTHO05D005384 8.4e-23 111.3 69 73.9
Nn1g04361 Nelumbo nucifera HOM05D004704 ORTHO05D005384 1.4e-22 110.5 69 76.8
PSO782G0987 Papaver somniferum HOM05D004704 ORTHO05D005384 1.4e-22 110.5 69 72.5
Dinv04632 Davidia involucrata HOM05D004704 ORTHO05D005384 1.9e-22 110.2 71 77.5
Sabra11G0046100 Salix brachista HOM05D004704 ORTHO05D005384 1.9e-22 110.2 69 72.5
Lalb_Chr20g0121271 Lupinus albus HOM05D004704 ORTHO05D005384 2.4e-22 109.8 69 68.1
Rhsim13G0105800 Rhododendron simsii HOM05D004704 ORTHO05D005384 3.2e-22 109.4 79 63.3
Sabra04G0035600 Salix brachista HOM05D004704 ORTHO05D005384 4.1e-22 109.0 69 73.9
CiPaw.09G067800 Carya illinoinensis HOM05D004704 ORTHO05D005384 7.1e-22 108.2 74 67.6
MBI06_g18007_MAGBIO Magnolia biondii HOM05D004704 ORTHO05D005384 7.1e-22 108.2 69 72.5
Aqoxy4G00469 Aquilegia oxysepala HOM05D004704 ORTHO05D005384 9.2e-22 107.8 74 67.6
Aqoxy1G03204 Aquilegia oxysepala HOM05D004704 ORTHO05D005384 2.1e-21 106.7 69 71.0
Cfa000584 Carpinus fangiana HOM05D004704 ORTHO05D005384 2.1e-21 106.7 69 71.0
Oeu062343.1 Olea europaea HOM05D004704 ORTHO05D005384 2.7e-21 106.3 61 82.0
QL04p061454 Quercus lobata HOM05D004704 ORTHO05D005384 1.0e-20 104.4 69 71.0
ClCG01G023620 Citrullus lanatus HOM05D004704 ORTHO05D005384 1.3e-20 104.0 69 69.6
Medtr2g091155 Medicago truncatula HOM05D004704 ORTHO05D005384 2.3e-20 103.2 74 63.5
Rhsim13G0186500 Rhododendron simsii HOM05D004704 ORTHO05D005384 2.3e-20 103.2 67 68.7
Eucgr.D00531 Eucalyptus grandis HOM05D004704 ORTHO05D005384 3.0e-20 102.8 69 69.6
Glyma.13G231200 Glycine max HOM05D004704 ORTHO05D005384 3.9e-20 102.4 74 66.2
QL05p046090 Quercus lobata HOM05D004704 ORTHO05D005384 3.9e-20 102.4 68 67.6
SGA_v2.0_scaffold1G00019 Striga asiatica HOM05D004704 ORTHO05D005384 3.9e-20 102.4 75 69.3
Ca_01465_v3 Cicer arietinum L. HOM05D004704 ORTHO05D005384 1.1e-19 100.9 74 63.5
CsaV3_6G050770 Cucumis sativus L. HOM05D004704 ORTHO05D005384 1.1e-19 100.9 69 68.1
DCAR_013058 Daucus carota HOM05D004704 ORTHO05D005384 1.1e-19 100.9 68 69.1
MELO3C007223.2 Cucumis melo HOM05D004704 ORTHO05D005384 1.5e-19 100.5 69 66.7
Glyma.13G291900 Glycine max HOM05D004704 ORTHO05D005384 1.5e-19 100.5 74 63.5
Rhsim13G0106000 Rhododendron simsii HOM05D004704 ORTHO05D005384 1.5e-19 100.5 69 63.8
Medtr2g091165 Medicago truncatula HOM05D004704 ORTHO05D005384 3.3e-19 99.4 74 62.2
SGA_v2.0_scaffold1G00026 Striga asiatica HOM05D004704 ORTHO05D005384 3.3e-19 99.4 75 66.7
Aqoxy4G00468 Aquilegia oxysepala HOM05D004704 ORTHO05D005384 4.3e-19 99.0 68 67.6
Psat5g275720 Pisum sativum HOM05D004704 ORTHO05D005384 5.6e-19 98.6 74 63.5
QL05p045074 Quercus lobata HOM05D004704 ORTHO05D005384 7.3e-19 98.2 68 64.7
Sed0013784 Sechium edule HOM05D004704 ORTHO05D005384 7.3e-19 98.2 69 65.2
TPR.G11553 Trifolium pratense HOM05D004704 ORTHO05D005384 9.6e-19 97.8 74 63.5
Lj3g0017096 Lotus japonicus HOM05D004704 ORTHO05D005384 1.2e-18 97.4 74 59.5
ATR0602G038 Amborella trichopoda HOM05D004704 ORTHO05D005384 2.1e-18 96.7 69 63.8
Lalb_Chr24g0400061 Lupinus albus HOM05D004704 ORTHO05D005384 2.1e-18 96.7 68 66.2
Oeu012062.1 Olea europaea HOM05D004704 ORTHO05D005384 2.1e-18 96.7 61 73.8
Phvul.005G096400 Phaseolus vulgaris HOM05D004704 ORTHO05D005384 2.1e-18 96.7 74 59.5
GSVIVG01021187001 Vitis vinifera HOM05D004704 ORTHO05D005384 2.1e-18 96.7 61 73.8
Lalb_Chr14g0367381 Lupinus albus HOM05D004704 ORTHO05D005384 2.8e-18 96.3 68 64.7
SGA_v2.0_scaffold1G00021 Striga asiatica HOM05D004704 ORTHO05D005384 2.8e-18 96.3 75 66.7
unitig_578.g16444 Utricularia gibba HOM05D004704 ORTHO05D005384 8.1e-18 94.7 69 65.2
Glyma.12G209400 Glycine max HOM05D004704 ORTHO05D005384 2.4e-17 93.2 74 60.8
BcaB04g18480 Brassica carinata HOM05D004704 ORTHO05D005384 8.9e-17 91.3 70 61.4
BcaC01g00546 Brassica carinata HOM05D004704 ORTHO05D005384 8.9e-17 91.3 70 61.4
BolC3t20394H Brassica oleracea HOM05D004704 ORTHO05D005384 8.9e-17 91.3 70 61.4
AL7G35740 Arabidopsis lyrata HOM05D004704 ORTHO05D005384 1.2e-16 90.9 70 61.4
A08p13850 Brassica napus HOM05D004704 ORTHO05D005384 2.0e-16 90.1 70 60.0
Thhalv10024794m.g Eutrema salsugineum HOM05D004704 ORTHO05D005384 2.6e-16 89.7 70 58.6
VMungo1080G1587 Vigna mungo HOM05D004704 ORTHO05D005384 2.6e-16 89.7 74 56.8
Carub.0007s2269 Capsella rubella HOM05D004704 ORTHO05D005384 3.4e-16 89.4 70 61.4
CARHR225390 Cardamine hirsuta HOM05D004704 ORTHO05D005384 3.4e-16 89.4 70 60.0
BcaC06g30574 Brassica carinata HOM05D004704 ORTHO05D005384 4.4e-16 89.0 70 60.0
A03p51400 Brassica napus HOM05D004704 ORTHO05D005384 4.4e-16 89.0 70 60.0
C01p12500 Brassica napus HOM05D004704 ORTHO05D005384 5.8e-16 88.6 70 62.9
Sp7g15490 Schrenkiella parvula HOM05D004704 ORTHO05D005384 7.6e-16 88.2 70 60.0
BcaC09g51492 Brassica carinata HOM05D004704 ORTHO05D005384 9.9e-16 87.8 70 60.0
BcaC09g51493 Brassica carinata HOM05D004704 ORTHO05D005384 9.9e-16 87.8 70 60.0
BcaNung02719 Brassica carinata HOM05D004704 ORTHO05D005384 9.9e-16 87.8 70 58.6
A01p10560 Brassica napus HOM05D004704 ORTHO05D005384 9.9e-16 87.8 70 60.0
C07p49820 Brassica napus HOM05D004704 ORTHO05D005384 9.9e-16 87.8 70 58.6
BolC1t01223H Brassica oleracea HOM05D004704 ORTHO05D005384 9.9e-16 87.8 70 60.0
BolC7t45484H Brassica oleracea HOM05D004704 ORTHO05D005384 9.9e-16 87.8 70 58.6
BraA01t01002Z Brassica rapa HOM05D004704 ORTHO05D005384 9.9e-16 87.8 70 60.0
Thhalv10023013m.g Eutrema salsugineum HOM05D004704 ORTHO05D005384 9.9e-16 87.8 70 58.6
BraA08t33364Z Brassica rapa HOM05D004704 ORTHO05D005384 1.3e-15 87.4 70 58.6
Aa31LG6G1280 Aethionema arabicum HOM05D004704 ORTHO05D005384 2.2e-15 86.7 70 57.1
BcaNung03813 Brassica carinata HOM05D004704 ORTHO05D005384 2.2e-15 86.7 70 60.0
BraA03t14222Z Brassica rapa HOM05D004704 ORTHO05D005384 2.9e-15 86.3 70 57.1
BcaNung03810 Brassica carinata HOM05D004704 ORTHO05D005384 4.9e-15 85.5 70 60.0
Aqoxy1G03203 Aquilegia oxysepala HOM05D004704 ORTHO05D005384 8.4e-15 84.7 64 57.8
Zm00001eb161990 Zea mays HOM05D004704 ORTHO05D005384 5.4e-14 82.0 72 51.4
COL.COLO4_31332 Corchorus olitorius HOM05D004704 ORTHO05D005384 1.0e-12 77.8 56 64.3
Os01g0613100 Oryza sativa ssp. japonica HOM05D004704 ORTHO05D005384 1.0e-12 77.8 73 50.7
PSO063G6793 Papaver somniferum HOM05D004704 ORTHO05D005384 1.3e-12 77.4 51 70.6
Rhsim06G0194600 Rhododendron simsii HOM05D000067 ORTHO05D005384 7.3e-11 71.6 74 47.3
C03p81280 Brassica napus HOM05D004704 ORTHO05D005384 8.1e-10 68.2 59 52.5
CSS0042475 Camellia sinensis var. sinensis HOM05D004704 ORTHO05D005384 8.1e-10 68.2 41 80.5
CDE02G3156 Ceratophyllum demersum HOM05D004704 ORTHO05D005384 8.1e-10 68.2 58 56.9
Pp3c12_12860 Physcomitrium patens HOM05D004704 ORTHO05D005384 8.1e-10 68.2 68 41.2
GSVIVG01021186001 Vitis vinifera HOM05D004704 ORTHO05D000303 2.4e-09 66.6 49 65.3
arahy.Tifrunner.gnm1.ann1.ESA3XA Arachis hypogaea HOM05D004704 ORTHO05D005384 6.4e-07 58.5 28 100.0


User provided reference genes

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