Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.E2IMN8 Arachis hypogaea HOM05D004589 ORTHO05D005848 1.5e-46 189.1 95 100.0
arahy.Tifrunner.gnm1.ann1.JQP3NY Arachis hypogaea HOM05D004589 ORTHO05D005848 5.7e-17 90.9 44 93.2
arahy.Tifrunner.gnm1.ann1.PKKG09 Arachis hypogaea HOM05D004589 ORTHO05D005848 2.8e-16 88.6 44 90.9
QL02p020149 Quercus lobata HOM05D004589 ORTHO05D005848 1.3e-13 79.7 52 67.3
COL.COLO4_18916 Corchorus olitorius HOM05D004589 ORTHO05D005848 2.3e-13 79.0 44 72.7
MELO3C016987.2 Cucumis melo HOM05D004589 ORTHO05D005848 3.8e-13 78.2 46 69.6
Duzib150G1268 Durio zibethinus HOM05D004589 ORTHO05D005848 5.0e-13 77.8 44 72.7
PSO210G3160 Papaver somniferum HOM05D004589 ORTHO05D005848 5.0e-13 77.8 47 68.1
Lj8A732G29 Lonicera japonica HOM05D004589 ORTHO05D005848 6.5e-13 77.4 52 67.3
MSTRG.1735 Avicennia marina HOM05D004589 ORTHO05D005848 8.6e-13 77.0 62 59.7
Ca_13043_v3 Cicer arietinum L. HOM05D004589 ORTHO05D005848 8.6e-13 77.0 52 69.2
TPR.G38939 Trifolium pratense HOM05D004589 ORTHO05D005848 8.6e-13 77.0 44 77.3
Actinidia23085 Actinidia chinensis HOM05D004589 ORTHO05D005848 1.1e-12 76.6 52 63.5
Cpa.g.sc187.29 Carica papaya HOM05D004589 ORTHO05D005848 1.1e-12 76.6 52 65.4
CiPaw.08G008300 Carya illinoinensis HOM05D004589 ORTHO05D005848 1.1e-12 76.6 52 65.4
Thecc.09G019500 Theobroma cacao HOM05D004589 ORTHO05D005848 1.1e-12 76.6 44 70.5
TWI63G0229 Tripterygium wilfordii HOM05D004589 ORTHO05D005848 1.1e-12 76.6 52 63.5
Haze_21457 Corylus avellana HOM05D004589 ORTHO05D005848 1.5e-12 76.3 53 60.4
THA.LOC104799036 Tarenaya hassleriana HOM05D004589 ORTHO05D005848 1.9e-12 75.9 49 67.3
ECA246G2532 Erigeron canadensis HOM05D004589 ORTHO05D005848 2.5e-12 75.5 50 64.0
Cfa013100 Carpinus fangiana HOM05D004589 ORTHO05D005848 3.2e-12 75.1 52 63.5
ClCG05G016580 Citrullus lanatus HOM05D004589 ORTHO05D005848 3.2e-12 75.1 46 65.2
Gohir.A07G030400 Gossypium hirsutum HOM05D004589 ORTHO05D005848 3.2e-12 75.1 44 75.0
Gohir.D07G034300 Gossypium hirsutum HOM05D004589 ORTHO05D005848 3.2e-12 75.1 44 75.0
Gorai.001G035900 Gossypium raimondii HOM05D004589 ORTHO05D005848 3.2e-12 75.1 44 75.0
SGA_v2.0_scaffold85G26586 Striga asiatica HOM05D004589 ORTHO05D005848 4.2e-12 74.7 62 61.3
DCAR_021911 Daucus carota HOM05D004589 ORTHO05D005848 5.5e-12 74.3 52 57.7
Medtr1g012980 Medicago truncatula HOM05D004589 ORTHO05D005848 7.2e-12 73.9 52 69.2
PGR044G0530 Punica granatum HOM05D004589 ORTHO05D005848 7.2e-12 73.9 53 60.4
RhsimUnG0052600 Rhododendron simsii HOM05D004589 ORTHO05D005848 7.2e-12 73.9 44 70.5
RhsimUnG0165300 Rhododendron simsii HOM05D004589 ORTHO05D005848 7.2e-12 73.9 44 70.5
Actinidia14103 Actinidia chinensis HOM05D004589 ORTHO05D005848 9.5e-12 73.6 44 65.9
AL6G21660 Arabidopsis lyrata HOM05D004589 ORTHO05D005848 9.5e-12 73.6 49 63.3
CSS0038938 Camellia sinensis var. sinensis HOM05D004589 ORTHO05D005848 9.5e-12 73.6 44 70.5
Carub.0006s0955 Capsella rubella HOM05D004589 ORTHO05D005848 9.5e-12 73.6 49 63.3
Gohir.D06G102200 Gossypium hirsutum HOM05D004589 ORTHO05D005848 9.5e-12 73.6 44 70.5
AT5G11040 Arabidopsis thaliana HOM05D004589 ORTHO05D005848 1.2e-11 73.2 49 63.3
CDE05G2463 Ceratophyllum demersum HOM05D004589 ORTHO05D005848 1.2e-11 73.2 51 64.7
Dinv03411 Davidia involucrata HOM05D004589 ORTHO05D005848 1.2e-11 73.2 52 63.5
Nitab4.5_0002503g0050 Nicotiana tabacum HOM05D004589 ORTHO05D005848 1.2e-11 73.2 48 64.6
Sed0004204 Sechium edule HOM05D004589 ORTHO05D005848 1.2e-11 73.2 53 58.5
SEGI_04045 Sequoiadendron giganteum HOM05D004589 ORTHO05D005848 1.2e-11 73.2 55 58.2
Solyc06g065840.3 Solanum lycopersicum HOM05D004589 ORTHO05D005848 1.2e-11 73.2 48 64.6
Sopen06g024330 Solanum pennellii HOM05D004589 ORTHO05D005848 1.2e-11 73.2 48 64.6
Nitab4.5_0003811g0060 Nicotiana tabacum HOM05D004589 ORTHO05D005848 1.6e-11 72.8 45 66.7
unitig_32.g11112 Utricularia gibba HOM05D004589 ORTHO05D005848 1.6e-11 72.8 62 58.1
BcaC04g19264 Brassica carinata HOM05D004589 ORTHO05D005848 2.1e-11 72.4 49 65.3
A10p26640 Brassica napus HOM05D004589 ORTHO05D005848 2.1e-11 72.4 49 65.3
C09p65810 Brassica napus HOM05D004589 ORTHO05D005848 2.1e-11 72.4 49 65.3
BolC9t59402H Brassica oleracea HOM05D004589 ORTHO05D005848 2.1e-11 72.4 49 65.3
BraA10t44722Z Brassica rapa HOM05D004589 ORTHO05D005848 2.1e-11 72.4 49 65.3
Atru.chr7.2502 Acer truncatum HOM05D004589 ORTHO05D005848 2.8e-11 72.0 43 67.4
Ciclev10007276m.g Citrus clementina HOM05D004589 ORTHO05D005848 2.8e-11 72.0 52 61.5
Lj5g0022357 Lotus japonicus HOM05D004589 ORTHO05D005848 2.8e-11 72.0 44 70.5
TAR383G0245 Trochodendron aralioides HOM05D004589 ORTHO05D005848 2.8e-11 72.0 52 61.5
CANSAT11G1771 Cannabis sativa HOM05D004589 ORTHO05D005848 3.6e-11 71.6 44 63.6
CAN.G199.72 Capsicum annuum HOM05D004589 ORTHO05D005848 3.6e-11 71.6 48 62.5
Lalb_Chr11g0075481 Lupinus albus HOM05D004589 ORTHO05D005848 3.6e-11 71.6 44 68.2
Nn8g39722 Nelumbo nucifera HOM05D004589 ORTHO05D005848 3.6e-11 71.6 52 61.5
Sp6g32450 Schrenkiella parvula HOM05D004589 ORTHO05D005848 3.6e-11 71.6 49 63.3
GSVIVG01035919001 Vitis vinifera HOM05D004589 ORTHO05D005848 3.6e-11 71.6 52 61.5
Thhalv10012483m.g Eutrema salsugineum HOM05D004589 ORTHO05D005848 4.7e-11 71.2 49 63.3
FAN27G1181 Fragaria x ananassa HOM05D004589 ORTHO05D005848 4.7e-11 71.2 52 59.6
MD15G1131100 Malus domestica HOM05D004589 ORTHO05D005848 6.1e-11 70.9 52 63.5
Nn2g12251 Nelumbo nucifera HOM05D004589 ORTHO05D005848 6.1e-11 70.9 52 57.7
RcHm_v2.0_Chr6g0297201 Rosa chinensis HOM05D004589 ORTHO05D005848 8.0e-11 70.5 52 59.6
ATR0629G049 Amborella trichopoda HOM05D004589 ORTHO05D005848 1.0e-10 70.1 52 59.6
FvH4_2g28290 Fragaria vesca HOM05D004589 ORTHO05D005848 1.0e-10 70.1 52 59.6
FAN15G2875 Fragaria x ananassa HOM05D004589 ORTHO05D005848 1.0e-10 70.1 44 63.6
FAN24G2656 Fragaria x ananassa HOM05D004589 ORTHO05D005848 1.0e-10 70.1 52 59.6
Manes.03G011700 Manihot esculenta HOM05D004589 ORTHO05D005848 1.0e-10 70.1 52 61.5
Lsat_1_v5_gn_1_43861 Lactuca sativa HOM05D004589 ORTHO05D005848 1.4e-10 69.7 48 62.5
Psat6g028520 Pisum sativum HOM05D004589 ORTHO05D005848 1.4e-10 69.7 44 70.5
vmacro22576 Vaccinium macrocarpon HOM05D004589 ORTHO05D005848 1.4e-10 69.7 44 65.9
Eucgr.C02726 Eucalyptus grandis HOM05D004589 ORTHO05D005848 2.3e-10 68.9 52 59.6
HanXRQChr16g0511131 Helianthus annuus HOM05D004589 ORTHO05D005848 2.3e-10 68.9 44 61.4
Oeu056766.2 Olea europaea HOM05D004589 ORTHO05D005848 3.0e-10 68.6 48 62.5
Lsat_1_v5_gn_6_115440 Lactuca sativa HOM05D004589 ORTHO05D005848 5.2e-10 67.8 52 51.9
Aa31LG3G16090 Aethionema arabicum HOM05D004589 ORTHO05D005848 6.8e-10 67.4 49 59.2
Manes.16G126200 Manihot esculenta HOM05D004589 ORTHO05D005848 8.8e-10 67.0 52 61.5
Migut.E01823 Erythranthe guttata HOM05D004589 ORTHO05D005848 1.2e-09 66.6 79 48.1
Glyma.17G215700 Glycine max HOM05D004589 ORTHO05D005848 1.2e-09 66.6 52 59.6
Phvul.001G047300 Phaseolus vulgaris HOM05D004589 ORTHO05D005848 1.5e-09 66.2 52 59.6
AagrBONN_evm.TU.Sc2ySwM_368.2742 Anthoceros agrestis HOM05D004589 ORTHO05D005848 2.6e-09 65.5 54 50.0
Aqoxy7G03529 Aquilegia oxysepala HOM05D004589 ORTHO05D005848 3.4e-09 65.1 52 55.8
Potri.006G259500 Populus trichocarpa HOM05D004589 ORTHO05D005848 3.4e-09 65.1 52 55.8
Glyma.14G112200 Glycine max HOM05D004589 ORTHO05D005848 4.4e-09 64.7 52 59.6
Potri.018G022500 Populus trichocarpa HOM05D004589 ORTHO05D005848 4.4e-09 64.7 52 53.8
Sc23g0006530 Simmondsia chinensis HOM05D004589 ORTHO05D005848 5.7e-09 64.3 44 59.1
VMungo0647G1846 Vigna mungo HOM05D004589 ORTHO05D005848 5.7e-09 64.3 53 56.6
HanXRQChr01g0030641 Helianthus annuus HOM05D004589 ORTHO05D005848 7.5e-09 63.9 50 56.0
Hma1.2p1_0167F.1_g073630 Hydrangea macrophylla HOM05D004589 ORTHO05D005848 1.7e-08 62.8 45 66.7
AUR62012448 Chenopodium quinoa HOM05D004589 ORTHO05D005848 2.8e-08 62.0 56 51.8
Ah.16g104820 Amaranthus hybridus HOM05D004589 ORTHO05D005848 4.9e-08 61.2 44 56.8
HPP92_020312 Vanilla planifolia HOM05D004589 ORTHO05D005848 4.9e-08 61.2 44 59.1
Cc08_g00190 Coffea canephora HOM05D004589 ORTHO05D005848 8.3e-08 60.5 76 46.1
EL10Ac2g04152 Beta vulgaris HOM05D004589 ORTHO05D005848 4.1e-07 58.2 56 48.2
AUR62031571 Chenopodium quinoa HOM05D004589 ORTHO05D005848 4.1e-07 58.2 56 50.0
Pp3c22_21520 Physcomitrium patens HOM05D004589 ORTHO05D005848 4.1e-07 58.2 52 46.2
arahy.Tifrunner.gnm1.ann1.V2535H Arachis hypogaea HOM05D000007 ORTHO05D000017 7.0e-07 57.4 36 80.6
Mapoly0001s0490 Marchantia polymorpha HOM05D004589 ORTHO05D005848 2.7e-06 55.5 44 50.0
Peaxi162Scf00430g00220 Petunia axillaris HOM05D004589 ORTHO05D005848 3.5e-06 55.1 32 65.6
HPP92_024790 Vanilla planifolia HOM05D004589 ORTHO05D005848 3.5e-06 55.1 44 50.0
Zm00001eb078140 Zea mays HOM05D004589 ORTHO05D005848 3.5e-06 55.1 44 54.5
Os04g0502200 Oryza sativa ssp. japonica HOM05D004589 ORTHO05D005848 4.5e-06 54.7 44 56.8


User provided reference genes

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