Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.DQ7S7B Arachis hypogaea HOM05D007618 ORTHO05D009606 8.2e-76 287.0 143 100.0
arahy.Tifrunner.gnm1.ann1.I7PWT1 Arachis hypogaea HOM05D007618 ORTHO05D009606 1.7e-65 252.7 146 90.4
arahy.Tifrunner.gnm1.ann1.ZSY7EJ Arachis hypogaea HOM05D007618 ORTHO05D009606 1.1e-61 240.0 132 94.7
Glyma.04G001200 Glycine max HOM05D007618 ORTHO05D009606 3.7e-52 208.4 128 81.2
Lalb_Chr08g0246841 Lupinus albus HOM05D007618 ORTHO05D009606 1.1e-51 206.8 116 86.2
Phvul.009G116000 Phaseolus vulgaris HOM05D007618 ORTHO05D009606 1.4e-51 206.5 116 86.2
Dinv14162 Davidia involucrata HOM05D007618 ORTHO05D009606 2.4e-51 205.7 116 83.6
Ciclev10029401m.g Citrus clementina HOM05D007618 ORTHO05D009606 9.1e-51 203.8 116 84.5
Glyma.06G000700 Glycine max HOM05D007618 ORTHO05D009606 1.2e-50 203.4 116 84.5
Nn6g31724 Nelumbo nucifera HOM05D007618 ORTHO05D009606 1.2e-50 203.4 116 83.6
Lj1g0004638 Lotus japonicus HOM05D007618 ORTHO05D009606 2.0e-50 202.6 116 86.2
CsaV3_6G010180 Cucumis sativus L. HOM05D007618 ORTHO05D009606 2.7e-50 202.2 116 83.6
MELO3C013504.2 Cucumis melo HOM05D007618 ORTHO05D009606 3.5e-50 201.8 116 83.6
Eucgr.I01514 Eucalyptus grandis HOM05D007618 ORTHO05D009606 3.5e-50 201.8 116 82.8
ClCG02G010360 Citrullus lanatus HOM05D007618 ORTHO05D009606 4.5e-50 201.4 116 83.6
TAR376G0137 Trochodendron aralioides HOM05D007618 ORTHO05D009606 5.9e-50 201.1 116 81.9
QL11p055874 Quercus lobata HOM05D007618 ORTHO05D009606 1.0e-49 200.3 116 82.8
TAR628G0843 Trochodendron aralioides HOM05D007618 ORTHO05D009606 1.7e-49 199.5 116 82.8
Sed0023624 Sechium edule HOM05D007618 ORTHO05D009606 2.2e-49 199.1 116 82.8
Hma1.2p1_0271F.1_g108950 Hydrangea macrophylla HOM05D007618 ORTHO05D009606 5.0e-49 198.0 116 80.2
MD10G1139000 Malus domestica HOM05D007618 ORTHO05D009606 5.0e-49 198.0 116 83.6
PSO541G4833 Papaver somniferum HOM05D007618 ORTHO05D009606 8.5e-49 197.2 116 81.0
Prupe.8G177800 Prunus persica HOM05D007618 ORTHO05D009606 8.5e-49 197.2 116 82.8
GSVIVG01023981001 Vitis vinifera HOM05D007618 ORTHO05D009606 8.5e-49 197.2 116 80.2
CANSAT64G2827 Cannabis sativa HOM05D007618 ORTHO05D009606 1.1e-48 196.8 116 81.0
Thecc.06G045200 Theobroma cacao HOM05D007618 ORTHO05D009606 1.1e-48 196.8 116 81.9
CiPaw.05G091300 Carya illinoinensis HOM05D007618 ORTHO05D009606 2.5e-48 195.7 116 81.0
COL.COLO4_26755 Corchorus olitorius HOM05D007618 ORTHO05D009606 4.2e-48 194.9 116 81.0
FvH4_2g16570 Fragaria vesca HOM05D007618 ORTHO05D009606 9.4e-48 193.7 116 81.9
PGR142G1310 Punica granatum HOM05D007618 ORTHO05D009606 9.4e-48 193.7 116 78.4
RcHm_v2.0_Chr6g0280641 Rosa chinensis HOM05D007618 ORTHO05D009606 1.2e-47 193.4 116 81.9
FAN15G3577 Fragaria x ananassa HOM05D007618 ORTHO05D009606 2.1e-47 192.6 116 81.0
EL10Ac9g21249 Beta vulgaris HOM05D007618 ORTHO05D009606 2.7e-47 192.2 116 78.4
Gohir.D10G000400 Gossypium hirsutum HOM05D007618 ORTHO05D009606 2.7e-47 192.2 116 78.4
Gorai.011G000800 Gossypium raimondii HOM05D002478 ORTHO05D003331 2.7e-47 192.2 116 78.4
HanXRQChr14g0459071 Helianthus annuus HOM05D007618 ORTHO05D009606 2.7e-47 192.2 116 77.6
Manes.04G067600 Manihot esculenta HOM05D007618 ORTHO05D009606 3.6e-47 191.8 116 81.0
FAN27G0591 Fragaria x ananassa HOM05D007618 ORTHO05D009606 4.7e-47 191.4 132 74.2
MSTRG.19948 Avicennia marina HOM05D007618 ORTHO05D009606 8.0e-47 190.7 116 77.6
Solyc01g112170.3 Solanum lycopersicum HOM05D007618 ORTHO05D009606 8.0e-47 190.7 116 76.7
Sopen01g054220 Solanum pennellii HOM05D007618 ORTHO05D009606 8.0e-47 190.7 116 76.7
SalBow1G1919 Salvia bowleyana HOM05D007618 ORTHO05D009606 2.3e-46 189.1 116 77.6
Nitab4.5_0000783g0170 Nicotiana tabacum HOM05D007618 ORTHO05D009606 4.0e-46 188.3 116 78.4
Cc09_g10690 Coffea canephora HOM05D007618 ORTHO05D009606 6.8e-46 187.6 116 75.9
arahy.Tifrunner.gnm1.ann1.U2J3P2 Arachis hypogaea HOM05D007618 ORTHO05D009606 8.8e-46 187.2 93 100.0
Migut.B00014 Erythranthe guttata HOM05D007618 ORTHO05D009606 8.8e-46 187.2 116 76.7
MBI08_g32524_MAGBIO Magnolia biondii HOM05D007618 ORTHO05D009606 8.8e-46 187.2 113 78.8
Potri.009G165700 Populus trichocarpa HOM05D007618 ORTHO05D009606 8.8e-46 187.2 116 76.7
Sabra09G0129500 Salix brachista HOM05D007618 ORTHO05D009606 1.5e-45 186.4 116 75.9
SGA_v2.0_scaffold32G13341 Striga asiatica HOM05D007618 ORTHO05D009606 1.5e-45 186.4 116 77.6
Hund06167 Selenicereus undatus HOM05D007618 ORTHO05D009606 2.0e-45 186.0 116 75.9
AUR62011704 Chenopodium quinoa HOM05D007618 ORTHO05D009606 2.6e-45 185.7 124 72.6
Potri.004G204700 Populus trichocarpa HOM05D007618 ORTHO05D009606 2.6e-45 185.7 116 75.9
PSO675G2292 Papaver somniferum HOM05D007618 ORTHO05D009606 3.4e-45 185.3 116 78.4
Cfa005346 Carpinus fangiana HOM05D007618 ORTHO05D009606 1.3e-44 183.3 128 72.7
Sabra04G0138200 Salix brachista HOM05D007618 ORTHO05D009606 2.2e-44 182.6 116 74.1
Gohir.A10G000200 Gossypium hirsutum HOM05D002478 ORTHO05D003331 4.1e-43 178.3 137 65.7
HPP92_022157 Vanilla planifolia HOM05D007618 ORTHO05D009606 4.1e-43 178.3 116 72.4
CDE05G0820 Ceratophyllum demersum HOM05D007618 ORTHO05D009606 7.0e-43 177.6 116 75.0
Sc18g0005980 Simmondsia chinensis HOM05D007618 ORTHO05D009606 2.0e-42 176.0 107 81.3
Lsat_1_v5_gn_8_120421 Lactuca sativa HOM05D007618 ORTHO05D009606 2.7e-42 175.6 110 75.5
Peaxi162Scf00362g00251 Petunia axillaris HOM05D007618 ORTHO05D009606 1.0e-41 173.7 110 77.3
Nitab4.5_0011212g0030 Nicotiana tabacum HOM05D007618 ORTHO05D009606 1.7e-41 172.9 137 65.7
vmacro02327 Vaccinium macrocarpon HOM05D007618 ORTHO05D009606 6.5e-41 171.0 171 54.4
VMungo1309G2136 Vigna mungo HOM05D007618 ORTHO05D009606 6.5e-41 171.0 94 87.2
QL11p055571 Quercus lobata HOM05D007618 ORTHO05D009606 6.8e-38 161.0 94 80.9
Duzib235G1428 Durio zibethinus HOM05D007618 ORTHO05D009606 2.0e-37 159.5 118 70.3
Atru.chr5.3531 Acer truncatum HOM05D007618 ORTHO05D009606 1.3e-36 156.8 95 77.9
Actinidia20565 Actinidia chinensis HOM05D007618 ORTHO05D009606 1.7e-36 156.4 94 78.7
Zm00001eb002550 Zea mays HOM05D007618 ORTHO05D009606 3.5e-34 148.7 100 69.0
DCAR_022841 Daucus carota HOM05D007618 ORTHO05D009606 5.9e-34 147.9 116 62.9
Mapoly0032s0019 Marchantia polymorpha HOM05D007618 ORTHO05D009606 1.2e-31 140.2 116 58.6
Pp3c3_10700 Physcomitrium patens HOM05D007618 ORTHO05D009606 2.1e-31 139.4 116 57.8
Nn1g00573 Nelumbo nucifera HOM05D007618 ORTHO05D009606 2.8e-31 139.0 91 72.5
arahy.Tifrunner.gnm1.ann1.0TM8HZ Arachis hypogaea HOM05D007618 ORTHO05D009606 1.5e-29 133.3 65 98.5
Rhsim11G0196900 Rhododendron simsii HOM05D007618 ORTHO05D009606 1.3e-25 120.2 67 83.6
TPR.G38509 Trifolium pratense HOM05D007618 ORTHO05D009606 5.0e-25 118.2 66 86.4
SEGI_37348 Sequoiadendron giganteum HOM05D007618 ORTHO05D009606 1.9e-24 116.3 116 53.4
ECA233G1377 Erigeron canadensis HOM05D007618 ORTHO05D009606 5.6e-24 114.8 67 79.1
Psat5g000560 Pisum sativum HOM05D007618 ORTHO05D009606 5.6e-24 114.8 67 83.6
PGSC0003DMG401014675 Solanum tuberosum HOM05D007618 ORTHO05D009606 3.7e-20 102.1 113 50.4
TPR.G29338 Trifolium pratense HOM05D007618 ORTHO05D009606 1.2e-18 97.1 56 82.1
SMO367G1105 Selaginella moellendorffii HOM05D007618 ORTHO05D009606 3.0e-17 92.4 116 46.6
CBR_g37948 Chara braunii HOM05D007618 ORTHO05D009606 2.1e-15 86.3 117 37.6
CBR_g30676 Chara braunii HOM05D007618 ORTHO05D009606 2.8e-15 85.9 117 38.5
FAN24G0716 Fragaria x ananassa HOM05D007618 ORTHO05D009606 2.8e-15 85.9 69 66.7
Nn5g30826 Nelumbo nucifera HOM05D007618 ORTHO05D009606 3.6e-15 85.5 70 58.6
Cre03.g200050 Chlamydomonas reinhardtii HOM05D007618 ORTHO05D009606 1.8e-14 83.2 118 39.0
Oeu006123.1 Olea europaea HOM05D007618 ORTHO05D009606 8.9e-14 80.9 48 77.1
ECA233G4785 Erigeron canadensis HOM05D007618 ORTHO05D009606 8.3e-12 74.3 48 72.9
Cre12.g506850 Chlamydomonas reinhardtii HOM05D007618 ORTHO05D009606 7.1e-11 71.2 118 33.9
MCO11G779 Micromonas commoda HOM05D007618 ORTHO05D009606 7.1e-11 71.2 120 35.8
Psat5g000680 Pisum sativum HOM05D007618 ORTHO05D009606 1.0e-09 67.4 35 82.9
Cc03_g12640 Coffea canephora HOM05D007618 ORTHO05D009606 1.3e-09 67.0 69 53.6


User provided reference genes

Program Settings