Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.DP08C5 Arachis hypogaea HOM05D005193 ORTHO05D006316 4.6e-149 531.2 261 100.0
arahy.Tifrunner.gnm1.ann1.SW2PFC Arachis hypogaea HOM05D005193 ORTHO05D006316 4.6e-149 531.2 261 100.0
arahy.Tifrunner.gnm1.ann1.6PV7EE Arachis hypogaea HOM05D005193 ORTHO05D006316 8.1e-106 387.5 250 81.2
arahy.Tifrunner.gnm1.ann1.K04HM7 Arachis hypogaea HOM05D005193 ORTHO05D006316 3.1e-105 385.6 251 80.5
arahy.Tifrunner.gnm1.ann1.J5TE7C Arachis hypogaea HOM05D005193 ORTHO05D006316 1.6e-98 363.2 241 79.3
Glyma.14G021300 Glycine max HOM05D005193 ORTHO05D006316 2.0e-80 303.1 251 64.5
VMungo0647G2043 Vigna mungo HOM05D005193 ORTHO05D006316 2.2e-79 299.7 251 64.5
LjContig00272g0004657 Lotus japonicus HOM05D005193 ORTHO05D006316 3.8e-79 298.9 256 64.5
Ca_11685_v3 Cicer arietinum L. HOM05D005193 ORTHO05D006316 9.4e-78 294.3 256 64.8
Psat6g078440 Pisum sativum HOM05D005193 ORTHO05D006316 2.7e-77 292.7 252 64.3
Phvul.008G270200 Phaseolus vulgaris HOM05D005193 ORTHO05D006316 6.1e-77 291.6 251 62.9
Medtr1g056460 Medicago truncatula HOM05D005193 ORTHO05D006316 1.3e-74 283.9 254 61.4
QL08p009116 Quercus lobata HOM05D005193 ORTHO05D006316 1.3e-66 257.3 255 56.5
Lalb_Chr17g0348621 Lupinus albus HOM05D005193 ORTHO05D006316 1.8e-65 253.4 250 57.6
RcHm_v2.0_Chr5g0040821 Rosa chinensis HOM05D005193 ORTHO05D006316 1.6e-61 240.4 263 51.7
RhsimUnG0248800 Rhododendron simsii HOM05D005193 ORTHO05D006316 4.4e-59 232.3 260 50.8
CiPaw.11G192300 Carya illinoinensis HOM05D005193 ORTHO05D006316 5.7e-59 231.9 255 52.5
vmacro09699 Vaccinium macrocarpon HOM05D005193 ORTHO05D006316 1.7e-58 230.3 260 50.4
Dinv40781 Davidia involucrata HOM05D005193 ORTHO05D006316 2.2e-58 229.9 253 53.0
FAN21G2135 Fragaria x ananassa HOM05D005193 ORTHO05D006316 6.3e-58 228.4 263 50.2
Prupe.4G218100 Prunus persica HOM05D005193 ORTHO05D006316 2.7e-56 223.0 260 49.6
FvH4_3g23170 Fragaria vesca HOM05D005193 ORTHO05D006316 3.5e-56 222.6 264 50.0
Gohir.D01G069100 Gossypium hirsutum HOM05D005193 ORTHO05D006316 5.9e-56 221.9 259 49.8
Duzib268G1225 Durio zibethinus HOM05D005193 ORTHO05D006316 1.7e-55 220.3 251 50.6
MD03G1197400 Malus domestica HOM05D005193 ORTHO05D006316 1.7e-55 220.3 260 49.6
Potri.001G356700 Populus trichocarpa HOM05D005193 ORTHO05D006316 2.9e-55 219.5 253 49.8
Lj1C877G9 Lonicera japonica HOM05D005193 ORTHO05D006316 5.0e-55 218.8 255 47.5
FAN16G1885 Fragaria x ananassa HOM05D005193 ORTHO05D006316 1.9e-54 216.9 264 48.1
Gohir.A01G082500 Gossypium hirsutum HOM05D005193 ORTHO05D006316 1.9e-54 216.9 259 49.0
TWI38G1184 Tripterygium wilfordii HOM05D005193 ORTHO05D006316 5.5e-54 215.3 261 49.0
Gorai.002G091400 Gossypium raimondii HOM05D005193 ORTHO05D006316 9.4e-54 214.5 260 49.2
TAR627G0707 Trochodendron aralioides HOM05D005193 ORTHO05D006316 2.1e-53 213.4 258 49.2
Ciclev10007388m.g Citrus clementina HOM05D005193 ORTHO05D006316 2.7e-53 213.0 258 50.4
Thecc.07G032100 Theobroma cacao HOM05D005193 ORTHO05D006316 2.7e-53 213.0 259 49.4
FAN11G0281 Fragaria x ananassa HOM05D005193 ORTHO05D006316 6.1e-53 211.8 278 46.4
Hma1.2p1_0036F.1_g023390 Hydrangea macrophylla HOM05D005193 ORTHO05D006316 6.1e-53 211.8 245 51.0
Atru.chr2.3490 Acer truncatum HOM05D005193 ORTHO05D006316 1.0e-52 211.1 231 51.1
Sabra16G0234700 Salix brachista HOM05D005193 ORTHO05D006316 6.8e-52 208.4 253 48.2
Actinidia10743 Actinidia chinensis HOM05D005193 ORTHO05D006316 1.2e-51 207.6 257 47.9
CANSAT11G2467 Cannabis sativa HOM05D005193 ORTHO05D006316 1.2e-51 207.6 261 47.5
COL.COLO4_09693 Corchorus olitorius HOM05D005193 ORTHO05D006316 5.7e-51 205.3 265 47.2
Nn1g03454 Nelumbo nucifera HOM05D005193 ORTHO05D006316 7.5e-51 204.9 256 46.5
Nitab4.5_0000168g0220 Nicotiana tabacum HOM05D005193 ORTHO05D006316 3.7e-50 202.6 261 46.0
TPR.G2822 Trifolium pratense HOM05D005193 ORTHO05D006316 1.6e-48 197.2 237 51.1
MSTRG.6941 Avicennia marina HOM05D005193 ORTHO05D006316 3.2e-46 189.5 263 43.3
Migut.M01736 Erythranthe guttata HOM05D005193 ORTHO05D006316 5.5e-46 188.7 251 45.0
FAN25G0346 Fragaria x ananassa HOM05D005193 ORTHO05D006316 5.5e-46 188.7 337 38.3
PSO832G1529 Papaver somniferum HOM05D005193 ORTHO05D006316 8.0e-45 184.9 260 43.1
Hund02018 Selenicereus undatus HOM05D005193 ORTHO05D006316 1.0e-44 184.5 253 43.1
Cc05_g14020 Coffea canephora HOM05D005193 ORTHO05D006316 1.8e-44 183.7 261 42.5
PSO210G7537 Papaver somniferum HOM05D005193 ORTHO05D006316 6.8e-44 181.8 260 42.7
PGR031G1204 Punica granatum HOM05D005193 ORTHO05D006316 1.2e-43 181.0 259 40.9
MELO3C013149.2 Cucumis melo HOM05D005193 ORTHO05D006316 2.8e-42 176.4 254 42.9
ECA236G2682 Erigeron canadensis HOM05D005193 ORTHO05D006316 2.8e-42 176.4 254 40.6
Aqoxy4G01697 Aquilegia oxysepala HOM05D005193 ORTHO05D006316 1.1e-41 174.5 247 42.1
Sopen12g001090 Solanum pennellii HOM05D005193 ORTHO05D006316 1.8e-41 173.7 257 42.8
Aqoxy1G03394 Aquilegia oxysepala HOM05D005193 ORTHO05D006316 4.1e-41 172.6 248 42.7
CsaV3_7G021980 Cucumis sativus L. HOM05D005193 ORTHO05D006316 1.2e-40 171.0 250 42.4
Lsat_1_v5_gn_7_111080 Lactuca sativa HOM05D005193 ORTHO05D006316 2.0e-40 170.2 254 39.4
FAN25G2894 Fragaria x ananassa HOM05D005193 ORTHO05D006316 2.3e-39 166.8 309 37.2
Oeu041839.1 Olea europaea HOM05D005193 ORTHO05D006316 1.1e-38 164.5 179 51.4
Sp1g37570 Schrenkiella parvula HOM05D005193 ORTHO05D006316 1.1e-38 164.5 247 39.7
HanXRQChr11g0335911 Helianthus annuus HOM05D005193 ORTHO05D006316 3.3e-38 162.9 223 40.8
Haze_09711 Corylus avellana HOM05D005193 ORTHO05D006316 4.3e-38 162.5 154 55.2
AT1G50730 Arabidopsis thaliana HOM05D005193 ORTHO05D006316 7.3e-38 161.8 253 37.9
Carub.0001s3976 Capsella rubella HOM05D005193 ORTHO05D006316 7.3e-38 161.8 254 38.2
CARHR040830 Cardamine hirsuta HOM05D005193 ORTHO05D006316 1.6e-37 160.6 247 38.9
AUR62015820 Chenopodium quinoa HOM05D005193 ORTHO05D006316 3.6e-37 159.5 228 40.8
Sed0015549 Sechium edule HOM05D005193 ORTHO05D006316 3.6e-37 159.5 249 39.8
MBI07_g09089_MAGBIO Magnolia biondii HOM05D005193 ORTHO05D006316 1.4e-36 157.5 238 41.6
AUR62020399 Chenopodium quinoa HOM05D005193 ORTHO05D006316 8.9e-36 154.8 228 40.4
Ah.06g182590 Amaranthus hybridus HOM05D005193 ORTHO05D006316 1.2e-35 154.5 256 38.7
ATR0585G046 Amborella trichopoda HOM05D005193 ORTHO05D006316 7.5e-35 151.8 184 46.2
BraA06t23495Z Brassica rapa HOM05D005193 ORTHO05D006316 9.8e-35 151.4 264 36.7
CSS0020168 Camellia sinensis var. sinensis HOM05D005193 ORTHO05D006316 1.7e-34 150.6 174 49.4
THA.LOC104816145 Tarenaya hassleriana HOM05D005193 ORTHO05D006316 8.3e-34 148.3 252 37.7
Nitab4.5_0003450g0040 Nicotiana tabacum HOM05D005193 ORTHO05D006316 1.0e-31 141.4 196 44.9
CDE02G4624 Ceratophyllum demersum HOM05D005193 ORTHO05D006316 1.1e-30 137.9 283 35.3
Eucgr.F03483 Eucalyptus grandis HOM05D005193 ORTHO05D006316 1.1e-30 137.9 146 49.3
C06p05990 Brassica napus HOM05D005193 ORTHO05D006316 5.6e-30 135.6 257 35.0
HPP92_008858 Vanilla planifolia HOM05D005193 ORTHO05D006316 7.3e-30 135.2 225 36.4
Peaxi162Scf00660g00118 Petunia axillaris HOM05D005193 ORTHO05D006316 2.1e-29 133.7 147 49.7
BcaB07g33512 Brassica carinata HOM05D005193 ORTHO05D006316 3.6e-29 132.9 256 36.7
A06p02890 Brassica napus HOM05D005193 ORTHO05D006316 3.6e-29 132.9 258 34.9
ClCG09G010950 Citrullus lanatus HOM05D005193 ORTHO05D006316 1.4e-28 131.0 196 41.8
Aa31LG10G3620 Aethionema arabicum HOM05D005193 ORTHO05D006316 1.8e-28 130.6 247 36.0
BcaC08g43253 Brassica carinata HOM05D005193 ORTHO05D006316 2.6e-27 126.7 257 35.4
Manes.15G068700 Manihot esculenta HOM05D005193 ORTHO05D006316 2.6e-27 126.7 137 48.2
Thhalv10011218m.g Eutrema salsugineum HOM05D005193 ORTHO05D006316 3.7e-26 122.9 208 37.5
Mapoly0038s0063 Marchantia polymorpha HOM05D005193 ORTHO05D006316 7.0e-25 118.6 183 36.6
Pp3c16_8580 Physcomitrium patens HOM05D005193 ORTHO05D006316 4.6e-24 115.9 183 36.6
Lsat_1_v5_gn_6_67380 Lactuca sativa HOM05D005193 ORTHO05D006316 6.0e-24 115.5 192 35.9
Lsat_1_v5_gn_9_67960 Lactuca sativa HOM05D005193 ORTHO05D006316 6.0e-24 115.5 192 35.9
AagrBONN_evm.TU.Sc2ySwM_344.2169 Anthoceros agrestis HOM05D005193 ORTHO05D006316 7.8e-24 115.2 246 32.1
TPR.G2800 Trifolium pratense HOM05D005193 ORTHO05D006316 4.3e-22 109.4 91 62.6
SMO115G0237 Selaginella moellendorffii HOM05D005193 ORTHO05D006316 1.2e-21 107.8 180 35.0
GSVIVG01037690001 Vitis vinifera HOM05D005193 ORTHO05D006316 8.1e-21 105.1 70 70.0
Haze_09712 Corylus avellana HOM05D005193 ORTHO05D006316 1.7e-18 97.4 110 54.5
CBR_g49709 Chara braunii HOM05D005193 ORTHO05D000048 3.7e-18 96.3 214 31.3
Cpa.g.sc12.274 Carica papaya HOM05D005193 ORTHO05D006316 6.4e-18 95.5 113 44.2
BolC6t35712H Brassica oleracea HOM05D005193 ORTHO05D006316 2.3e-15 87.0 228 29.8
EL10Ac4g07765 Beta vulgaris HOM05D005193 ORTHO05D006316 1.1e-14 84.7 170 35.9
Cpa.g.sc12.273 Carica papaya HOM05D005193 ORTHO05D006316 9.5e-14 81.6 102 47.1
MD16G1253600 Malus domestica HOM05D005193 ORTHO05D006316 3.1e-12 76.6 54 64.8
TPR.G2798 Trifolium pratense HOM05D005193 ORTHO05D006316 2.6e-11 73.6 59 64.4
Sabra16G0098300 Salix brachista HOM05D005193 ORTHO05D006316 9.9e-11 71.6 43 74.4
GSVIVG01037691001 Vitis vinifera HOM05D005193 ORTHO05D006316 1.3e-10 71.2 102 48.0
Sabra06G0024500 Salix brachista HOM05D005193 ORTHO05D006316 8.4e-10 68.6 43 72.1
Eucgr.F03486 Eucalyptus grandis HOM05D005193 ORTHO05D006316 1.1e-09 68.2 101 48.5
AUR62015822 Chenopodium quinoa HOM05D005193 ORTHO05D006316 4.6e-08 62.8 146 30.1
AagrBONN_evm.TU.Sc2ySwM_362.1473 Anthoceros agrestis HOM05D005193 ORTHO05D006316 1.7e-07 60.8 108 34.3
arahy.Tifrunner.gnm1.ann1.TTKZ9K Arachis hypogaea HOM05D000053 ORTHO05D000035 3.3e-06 56.6 66 48.5


User provided reference genes

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