Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.DJ5Q02 Arachis hypogaea HOM05D008505 ORTHO05D010735 2.0e-59 232.3 117 100.0
Glyma.12G232400 Glycine max HOM05D008505 ORTHO05D010735 6.0e-16 87.8 42 100.0
Glyma.15G126100 Glycine max HOM05D008505 ORTHO05D010735 6.0e-16 87.8 42 100.0
Phvul.002G090522 Phaseolus vulgaris HOM05D008505 ORTHO05D010735 6.0e-16 87.8 42 100.0
Phvul.009G188366 Phaseolus vulgaris HOM05D008505 ORTHO05D010735 6.0e-16 87.8 42 100.0
CAN.G1739.9 Capsicum annuum HOM05D008505 ORTHO05D010735 7.8e-16 87.4 55 76.4
LjContig00318g0023250 Lotus japonicus HOM05D008505 ORTHO05D010735 2.3e-15 85.9 45 91.1
CAN.G2018.8 Capsicum annuum HOM05D008505 ORTHO05D010735 5.1e-15 84.7 42 95.2
CAN.G3365.2 Capsicum annuum HOM05D008505 ORTHO05D010735 5.1e-15 84.7 42 95.2
CAN.G35999.1 Capsicum annuum HOM05D008505 ORTHO05D010735 5.1e-15 84.7 42 95.2
CAN.G89.2 Capsicum annuum HOM05D008505 ORTHO05D010735 5.1e-15 84.7 42 95.2
Migut.D01431 Erythranthe guttata HOM05D008505 ORTHO05D010735 5.1e-15 84.7 42 95.2
Solyc01g067760.1 Solanum lycopersicum HOM05D008505 ORTHO05D010735 5.1e-15 84.7 42 95.2
Solyc09g064400.2 Solanum lycopersicum HOM05D008505 ORTHO05D010735 5.1e-15 84.7 42 95.2
DCAR_032504 Daucus carota HOM05D008505 ORTHO05D010735 8.6e-15 84.0 43 93.0
Gorai.009G128900 Gossypium raimondii HOM05D008505 ORTHO05D010735 1.5e-14 83.2 42 90.5
CAN.G452.6 Capsicum annuum HOM05D008505 ORTHO05D010735 2.5e-14 82.4 42 92.9
PGR111G0077 Punica granatum HOM05D008505 ORTHO05D010735 2.5e-14 82.4 42 92.9
ATCG00630 Arabidopsis thaliana HOM05D008505 ORTHO05D010735 5.6e-14 81.3 42 90.5
CAN.G1595.9 Capsicum annuum HOM05D008505 ORTHO05D010735 5.6e-14 81.3 42 90.5
CARHR282140 Cardamine hirsuta HOM05D008505 ORTHO05D010735 5.6e-14 81.3 42 90.5
Gohir.A12G229532 Gossypium hirsutum HOM05D008505 ORTHO05D010735 7.3e-14 80.9 43 90.7
Nitab4.5_0011882g0050 Nicotiana tabacum HOM05D008505 ORTHO05D010735 1.6e-13 79.7 42 88.1
Gorai.005G108800 Gossypium raimondii HOM05D008505 ORTHO05D010735 2.8e-13 79.0 42 85.7
PSO548G0021 Papaver somniferum HOM05D008505 ORTHO05D010735 3.6e-13 78.6 42 85.7
A06p23140 Brassica napus HOM05D008505 ORTHO05D010735 4.7e-13 78.2 43 88.4
C02p43560 Brassica napus HOM05D008505 ORTHO05D010735 4.7e-13 78.2 43 88.4
C06p22980 Brassica napus HOM05D008505 ORTHO05D010735 4.7e-13 78.2 43 88.4
BolC9t53162H Brassica oleracea HOM05D008505 ORTHO05D010735 4.7e-13 78.2 43 88.4
BolSC29t60474H Brassica oleracea HOM05D008505 ORTHO05D010735 4.7e-13 78.2 43 88.4
BolSC29t60595H Brassica oleracea HOM05D008505 ORTHO05D010735 4.7e-13 78.2 43 88.4
BolSC35t60655H Brassica oleracea HOM05D008505 ORTHO05D010735 4.7e-13 78.2 43 88.4
BolSC47t61089H Brassica oleracea HOM05D008505 ORTHO05D010735 4.7e-13 78.2 43 88.4
BraA06t25417Z Brassica rapa HOM05D008505 ORTHO05D010735 4.7e-13 78.2 43 88.4
BraSC138t45568Z Brassica rapa HOM05D008505 ORTHO05D010735 4.7e-13 78.2 43 88.4
BraSC25t45858Z Brassica rapa HOM05D008505 ORTHO05D010735 4.7e-13 78.2 43 88.4
BraSC58t46429Z Brassica rapa HOM05D008505 ORTHO05D010735 6.2e-13 77.8 42 88.1
Gohir.D12G108100 Gossypium hirsutum HOM05D008505 ORTHO05D010735 6.2e-13 77.8 43 88.4
C04p42980 Brassica napus HOM05D008505 ORTHO05D010735 1.1e-12 77.0 42 85.7
BolC4t25868H Brassica oleracea HOM05D008505 ORTHO05D010735 1.1e-12 77.0 42 85.7
BraSC103t45474Z Brassica rapa HOM05D008505 ORTHO05D010735 3.1e-12 75.5 42 88.1
BolC2t08913H Brassica oleracea HOM05D008505 ORTHO05D010735 4.0e-12 75.1 42 85.7
CiPaw.11G114400 Carya illinoinensis HOM05D008505 ORTHO05D010735 6.8e-12 74.3 43 86.0
Potri.003G067501 Populus trichocarpa HOM05D008505 ORTHO05D010735 1.5e-11 73.2 42 81.0
BraSC103t45457Z Brassica rapa HOM05D008505 ORTHO05D010735 5.8e-11 71.2 41 82.9
Gorai.007G307300 Gossypium raimondii HOM05D008505 ORTHO05D010735 7.5e-11 70.9 43 81.4
Gohir.D06G113625 Gossypium hirsutum HOM05D008505 ORTHO05D010735 2.9e-10 68.9 41 80.5
Gorai.010G129600 Gossypium raimondii HOM05D007549 ORTHO05D009532 2.9e-10 68.9 37 83.8
Medtr8g045210 Medicago truncatula HOM05D007549 ORTHO05D009532 1.1e-09 67.0 35 88.6
ClCG00G001570 Citrullus lanatus HOM05D000540 ORTHO05D008899 1.7e-07 59.7 68 51.5
Hund19833 Selenicereus undatus HOM05D008505 ORTHO05D010735 3.9e-07 58.5 38 73.7
BolSC35t60742H Brassica oleracea HOM05D008505 ORTHO05D010735 1.5e-06 56.6 31 83.9
Nn3g18711 Nelumbo nucifera HOM05D008505 ORTHO05D010735 3.3e-06 55.5 28 89.3
arahy.Tifrunner.gnm1.ann1.94BM57 Arachis hypogaea HOM05D011000 ORTHO05D083736 5.6e-06 54.7 30 90.0


User provided reference genes

Program Settings