Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.DG5MW5 Arachis hypogaea HOM05D004723 ORTHO05D006176 0.0e+00 1123.2 690 100.0
arahy.Tifrunner.gnm1.ann1.7VD04T Arachis hypogaea HOM05D004723 ORTHO05D006176 1.6e-302 1042.3 696 93.8
Lalb_Chr16g0391491 Lupinus albus HOM05D004723 ORTHO05D006176 1.1e-231 807.0 697 74.6
Lj4g0028127 Lotus japonicus HOM05D004723 ORTHO05D006176 3.1e-205 719.2 671 68.6
VMungo0251G3240 Vigna mungo HOM05D004723 ORTHO05D006176 4.1e-205 718.8 668 67.4
Glyma.16G122800 Glycine max HOM05D004723 ORTHO05D006176 1.1e-199 700.7 725 61.4
Glyma.02G045200 Glycine max HOM05D004723 ORTHO05D006176 9.7e-199 697.6 689 65.2
Phvul.003G266400 Phaseolus vulgaris HOM05D004723 ORTHO05D006176 1.1e-197 694.1 709 62.2
Psat7g090000 Pisum sativum HOM05D004723 ORTHO05D006176 2.0e-196 689.9 676 65.4
Ca_18264_v3 Cicer arietinum L. HOM05D004723 ORTHO05D006176 3.3e-191 672.5 681 63.0
Gorai.012G044400 Gossypium raimondii HOM05D004723 ORTHO05D006176 1.4e-181 640.6 661 63.5
Medtr4g096820 Medicago truncatula HOM05D004723 ORTHO05D006176 1.9e-178 630.2 690 62.9
Eucgr.I02314 Eucalyptus grandis HOM05D004723 ORTHO05D006176 2.5e-178 629.8 657 60.7
Gohir.A05G376600 Gossypium hirsutum HOM05D004723 ORTHO05D006176 1.1e-173 614.4 666 61.0
Manes.10G142700 Manihot esculenta HOM05D004723 ORTHO05D006176 7.0e-173 611.7 728 54.8
Duzib147G1420 Durio zibethinus HOM05D004723 ORTHO05D006176 7.5e-167 591.7 672 59.4
Atru.chr3.886 Acer truncatum HOM05D004723 ORTHO05D006176 8.3e-166 588.2 672 57.4
Atru.chr3.897 Acer truncatum HOM05D004723 ORTHO05D006176 8.3e-166 588.2 672 57.4
TWI09G0244 Tripterygium wilfordii HOM05D004723 ORTHO05D006176 3.2e-165 586.3 722 57.3
Haze_03712 Corylus avellana HOM05D004723 ORTHO05D006176 7.0e-165 585.1 673 56.8
Potri.005G108800 Populus trichocarpa HOM05D004723 ORTHO05D006176 1.6e-164 583.9 691 60.9
CiPaw.07G062200 Carya illinoinensis HOM05D004723 ORTHO05D006176 3.5e-164 582.8 684 57.2
GSVIVG01007226001 Vitis vinifera HOM05D004723 ORTHO05D006176 1.0e-163 581.3 653 55.4
Sabra05G0089200 Salix brachista HOM05D004723 ORTHO05D006176 1.7e-163 580.5 695 60.1
Lj4A224T28 Lonicera japonica HOM05D004723 ORTHO05D006176 2.9e-163 579.7 706 55.9
Cfa007019 Carpinus fangiana HOM05D004723 ORTHO05D006176 1.2e-161 574.3 670 55.5
QL06p051414 Quercus lobata HOM05D004723 ORTHO05D006176 1.2e-161 574.3 701 57.8
Thecc.08G139800 Theobroma cacao HOM05D004723 ORTHO05D006176 1.2e-159 567.8 699 57.8
Ciclev10025027m.g Citrus clementina HOM05D004723 ORTHO05D006176 1.7e-158 563.9 660 61.1
Nn5g30820 Nelumbo nucifera HOM05D004723 ORTHO05D006176 1.1e-157 561.2 684 55.8
Sed0008382 Sechium edule HOM05D004723 ORTHO05D006176 1.1e-157 561.2 738 53.9
TAR628G1348 Trochodendron aralioides HOM05D004723 ORTHO05D006176 2.0e-156 557.0 625 61.0
Nitab4.5_0006899g0060 Nicotiana tabacum HOM05D004723 ORTHO05D006176 4.6e-156 555.8 750 54.5
ClCG05G000690 Citrullus lanatus HOM05D004723 ORTHO05D006176 6.0e-156 555.4 727 51.6
Cc07_g11220 Coffea canephora HOM05D004723 ORTHO05D006176 2.3e-155 553.5 683 51.8
TPR.G4863 Trifolium pratense HOM05D004723 ORTHO05D006176 5.6e-154 548.9 526 64.8
Sc07g0001170 Simmondsia chinensis HOM05D004723 ORTHO05D006176 1.2e-153 547.7 683 57.4
PGSC0003DMG400003588 Solanum tuberosum HOM05D004723 ORTHO05D006176 1.2e-153 547.7 695 57.1
Nitab4.5_0001789g0050 Nicotiana tabacum HOM05D004723 ORTHO05D006176 8.1e-153 545.0 703 57.6
MELO3C006009.2 Cucumis melo HOM05D004723 ORTHO05D006176 1.4e-152 544.3 728 52.3
Prupe.7G173800 Prunus persica HOM05D004723 ORTHO05D006176 6.8e-152 542.0 686 57.3
Solyc02g083470.3 Solanum lycopersicum HOM05D004723 ORTHO05D006176 3.4e-151 539.7 706 55.2
Sopen02g028260 Solanum pennellii HOM05D004723 ORTHO05D006176 4.4e-151 539.3 708 57.3
Gohir.1Z049326 Gossypium hirsutum HOM05D004723 ORTHO05D006176 2.2e-150 537.0 660 58.0
CsaV3_3G007910 Cucumis sativus L. HOM05D004723 ORTHO05D006176 3.2e-149 533.1 741 51.6
ECA232G2222 Erigeron canadensis HOM05D004723 ORTHO05D006176 1.6e-148 530.8 685 54.7
CSS0036730 Camellia sinensis var. sinensis HOM05D004723 ORTHO05D006176 2.1e-148 530.4 681 51.4
Actinidia35669 Actinidia chinensis HOM05D004723 ORTHO05D006176 3.9e-147 526.2 730 52.7
MSTRG.10980 Avicennia marina HOM05D004723 ORTHO05D006176 5.1e-147 525.8 686 48.5
Peaxi162Scf00198g00136 Petunia axillaris HOM05D004723 ORTHO05D006176 1.9e-146 523.9 723 55.5
Medtr4g073330 Medicago truncatula HOM05D004723 ORTHO05D006176 5.6e-146 522.3 659 58.7
MD02G1124600 Malus domestica HOM05D004723 ORTHO05D006176 6.2e-145 518.8 620 59.5
CSS0012813 Camellia sinensis var. sinensis HOM05D004723 ORTHO05D006176 2.0e-143 513.8 691 49.8
Cpa.g.sc6.304 Carica papaya HOM05D004723 ORTHO05D006176 3.4e-143 513.1 735 55.1
HanXRQChr09g0257321 Helianthus annuus HOM05D004723 ORTHO05D006176 2.2e-142 510.4 702 49.7
Hund14070 Selenicereus undatus HOM05D004723 ORTHO05D006176 4.9e-142 509.2 606 61.4
DCAR_024713 Daucus carota HOM05D004723 ORTHO05D006176 1.1e-141 508.1 721 51.9
PGR119G2074 Punica granatum HOM05D004723 ORTHO05D006176 1.7e-139 500.7 691 52.0
CAN.G890.41 Capsicum annuum HOM05D004723 ORTHO05D006176 1.1e-138 498.0 543 55.6
Lsat_1_v5_gn_4_144101 Lactuca sativa HOM05D004723 ORTHO05D006176 3.4e-135 486.5 739 49.9
Migut.F01827 Erythranthe guttata HOM05D004723 ORTHO05D006176 3.8e-134 483.0 530 55.7
EL10Ac6g15170 Beta vulgaris HOM05D004723 ORTHO05D006176 4.6e-132 476.1 690 53.6
AT3G01160 Arabidopsis thaliana HOM05D004723 ORTHO05D006176 7.3e-130 468.8 693 50.5
FAN19G1371 Fragaria x ananassa HOM05D004723 ORTHO05D006176 1.8e-128 464.2 676 54.6
FvH4_1g11200 Fragaria vesca HOM05D004723 ORTHO05D006176 2.4e-128 463.8 676 53.0
PSO675G8954 Papaver somniferum HOM05D004723 ORTHO05D006176 2.4e-128 463.8 685 47.3
FAN26G3228 Fragaria x ananassa HOM05D004723 ORTHO05D006176 3.4e-127 459.9 678 50.4
PSO541G1155 Papaver somniferum HOM05D004723 ORTHO05D006176 4.4e-127 459.5 686 49.4
Aqoxy6G02087 Aquilegia oxysepala HOM05D004723 ORTHO05D006176 7.6e-127 458.8 758 46.8
RcHm_v2.0_Chr2g0098611 Rosa chinensis HOM05D004723 ORTHO05D006176 7.6e-127 458.8 690 52.2
Rhsim08G0030800 Rhododendron simsii HOM05D004723 ORTHO05D006176 2.2e-126 457.2 627 50.6
AL3G11100 Arabidopsis lyrata HOM05D004723 ORTHO05D006176 1.1e-125 454.9 644 52.6
CANSAT25G3056 Cannabis sativa HOM05D004723 ORTHO05D006176 4.2e-125 453.0 691 49.1
SGA_v2.0_scaffold111G31425 Striga asiatica HOM05D004723 ORTHO05D006176 4.2e-125 453.0 567 55.6
AUR62003701 Chenopodium quinoa HOM05D004723 ORTHO05D006176 9.3e-125 451.8 689 50.1
unitig_22.g6210 Utricularia gibba HOM05D004119 ORTHO05D004797 1.6e-124 451.1 676 50.6
vmacro18436 Vaccinium macrocarpon HOM05D004723 ORTHO05D006176 2.1e-121 440.7 740 44.7
ATR0665G361 Amborella trichopoda HOM05D004723 ORTHO05D006176 2.4e-120 437.2 531 54.2
Sp3g00960 Schrenkiella parvula HOM05D004723 ORTHO05D006176 9.9e-119 431.8 697 48.6
AUR62018009 Chenopodium quinoa HOM05D004723 ORTHO05D006176 1.1e-117 428.3 524 53.4
Gohir.1Z049627 Gossypium hirsutum HOM05D004723 ORTHO05D006176 1.2e-116 424.9 418 65.1
Thhalv10020182m.g Eutrema salsugineum HOM05D004723 ORTHO05D006176 7.9e-116 422.2 679 50.7
Carub.0003s0100 Capsella rubella HOM05D004723 ORTHO05D006176 2.5e-114 417.2 683 52.1
SEGI_08029 Sequoiadendron giganteum HOM05D004723 ORTHO05D006176 1.3e-113 414.8 532 52.1
FAN23G0842 Fragaria x ananassa HOM05D004723 ORTHO05D006176 9.0e-112 408.7 509 51.7
Dinv40130 Davidia involucrata HOM05D004723 ORTHO05D006176 4.5e-111 406.4 297 71.7
Aa31LG5G12460 Aethionema arabicum HOM05D004723 ORTHO05D006176 2.2e-110 404.1 717 48.8
Ah.01g003790 Amaranthus hybridus HOM05D004723 ORTHO05D006176 2.9e-110 403.7 688 47.5
BraA05t23177Z Brassica rapa HOM05D004723 ORTHO05D006176 1.2e-108 398.3 715 48.0
Oeu005338.2 Olea europaea HOM05D004723 ORTHO05D006176 7.9e-108 395.6 684 46.3
CARHR075890 Cardamine hirsuta HOM05D004723 ORTHO05D006176 8.7e-107 392.1 667 50.4
BcaC05g30387 Brassica carinata HOM05D004723 ORTHO05D006176 1.1e-106 391.7 687 49.6
A05p44800 Brassica napus HOM05D004723 ORTHO05D006176 1.9e-106 391.0 718 47.8
C09p75390 Brassica napus HOM05D004723 ORTHO05D006176 7.4e-106 389.0 686 49.7
BcaC05g30489 Brassica carinata HOM05D004723 ORTHO05D006176 3.7e-105 386.7 702 48.4
BolC5t35121H Brassica oleracea HOM05D004723 ORTHO05D006176 1.1e-101 375.2 716 47.8
SHI00027 Sapria himalayana HOM05D004723 ORTHO05D006176 1.3e-99 368.2 579 45.3
AagrBONN_evm.TU.Sc2ySwM_117.2822 Anthoceros agrestis HOM05D004723 ORTHO05D006176 9.7e-98 362.1 686 44.8
BcaC01g04506 Brassica carinata HOM05D004723 ORTHO05D006176 1.1e-88 332.0 708 41.0
Thecc.01G155000 Theobroma cacao HOM05D004723 ORTHO05D006176 1.4e-88 331.6 375 60.8
Os07g0531700 Oryza sativa ssp. japonica HOM05D004723 ORTHO05D006176 7.7e-87 325.9 679 44.3
Zm00001eb323180 Zea mays HOM05D004723 ORTHO05D006176 7.7e-87 325.9 689 42.8
CDE05G0976 Ceratophyllum demersum HOM05D004723 ORTHO05D006176 8.5e-86 322.4 390 54.1
SMO232G0062 Selaginella moellendorffii HOM05D004723 ORTHO05D006176 3.2e-85 320.5 597 40.7
SMO239G0207 Selaginella moellendorffii HOM05D004723 ORTHO05D006176 3.6e-84 317.0 562 40.7
AagrBONN_evm.TU.Sc2ySwM_368.2747 Anthoceros agrestis HOM05D004723 ORTHO05D006176 6.7e-83 312.8 684 40.2
Pp3c17_7210 Physcomitrium patens HOM05D004723 ORTHO05D006176 2.4e-80 304.3 559 37.9
TAR628G1016 Trochodendron aralioides HOM05D004723 ORTHO05D005421 1.0e-70 272.3 196 69.9
Rhsim08G0030900 Rhododendron simsii HOM05D004723 ORTHO05D006176 2.5e-69 267.7 489 40.9
Mapoly0061s0018 Marchantia polymorpha HOM05D004723 ORTHO05D006176 1.6e-68 265.0 582 37.1
MD15G1238700 Malus domestica HOM05D004723 ORTHO05D006176 3.6e-68 263.8 313 59.1
Gohir.D04G039432 Gossypium hirsutum HOM05D004723 ORTHO05D006176 7.7e-55 219.5 245 53.9
HPP92_019125 Vanilla planifolia HOM05D004723 ORTHO05D006176 2.9e-54 217.6 197 54.8
C03p39900 Brassica napus HOM05D004723 ORTHO05D006176 4.3e-53 213.8 195 57.4
CBR_g41392 Chara braunii HOM05D004723 ORTHO05D006176 4.7e-52 210.3 720 31.9
PRCOL_00004947 Prasinoderma coloniale HOM05D004723 ORTHO05D006176 2.4e-48 198.0 480 37.1
TPR.G3121 Trifolium pratense HOM05D004723 ORTHO05D006176 2.4e-48 198.0 201 54.2
COL.COLO4_33606 Corchorus olitorius HOM05D004723 ORTHO05D006176 5.9e-47 193.4 258 57.8
COL.COLO4_34179 Corchorus olitorius HOM05D004723 ORTHO05D006176 1.5e-45 188.7 534 32.6
MD15G1238600 Malus domestica HOM05D004723 ORTHO05D006176 3.3e-45 187.6 289 49.5
Medtr3g107350 Medicago truncatula HOM05D004723 ORTHO05D006176 4.7e-44 183.7 288 52.8
MCO13G085 Micromonas commoda HOM05D004723 ORTHO05D006176 1.5e-42 178.7 426 32.4
Cre10.g452500 Chlamydomonas reinhardtii HOM05D004723 ORTHO05D006176 1.1e-40 172.6 406 33.7
CDE05G0343 Ceratophyllum demersum HOM05D004723 ORTHO05D006176 1.7e-33 148.7 265 46.4
HPP92_019124 Vanilla planifolia HOM05D004723 ORTHO05D006176 6.0e-31 140.2 242 41.3
BolC3t16253H Brassica oleracea HOM05D004723 ORTHO05D006176 5.6e-29 133.7 109 57.8
Medtr3g107330 Medicago truncatula HOM05D004723 ORTHO05D006176 4.0e-27 127.5 198 38.9
TPR.G21433 Trifolium pratense HOM05D004723 ORTHO05D006176 4.1e-24 117.5 184 42.9
TPR.G330 Trifolium pratense HOM05D004723 ORTHO05D006176 5.1e-22 110.5 283 30.4
Dinv40131 Davidia involucrata HOM05D004723 ORTHO05D006176 2.5e-21 108.2 120 55.8
TAR628G0893 Trochodendron aralioides HOM05D004723 ORTHO05D006176 4.3e-21 107.5 102 59.8
Lsat_1_v5_gn_5_164041 Lactuca sativa HOM05D004723 ORTHO05D006176 9.6e-21 106.3 155 41.3
TPR.G29970 Trifolium pratense HOM05D004723 ORTHO05D006176 1.2e-20 105.9 74 71.6
TPR.G36124 Trifolium pratense HOM05D004723 ORTHO05D006176 1.6e-20 105.5 93 58.1
GSVIVG01005594001 Vitis vinifera HOM05D004723 ORTHO05D006176 1.6e-20 105.5 168 48.8
AagrBONN_evm.TU.Sc2ySwM_117.2819 Anthoceros agrestis HOM05D004723 ORTHO05D006176 6.9e-19 100.1 314 30.9
Oeu046870.1 Olea europaea HOM05D004723 ORTHO05D006176 3.2e-16 91.3 134 46.3
GSVIVG01005388001 Vitis vinifera HOM05D004723 ORTHO05D006176 1.6e-15 89.0 73 61.6
THA.LOC104821168 Tarenaya hassleriana HOM05D004723 ORTHO05D006176 1.7e-14 85.5 129 44.2
Thecc.01G154900 Theobroma cacao HOM05D004723 ORTHO05D006176 4.0e-11 74.3 68 58.8
COL.COLO4_33622 Corchorus olitorius HOM05D004723 ORTHO05D006176 6.9e-11 73.6 77 49.4
BolC3t16252H Brassica oleracea HOM05D004723 ORTHO05D006176 2.6e-10 71.6 60 63.3
Thhalv10017085m.g Eutrema salsugineum HOM05D004723 ORTHO05D006176 2.6e-10 71.6 169 34.9
SEGI_25425 Sequoiadendron giganteum HOM05D004723 ORTHO05D006176 1.9e-08 65.5 59 61.0
Actinidia28727 Actinidia chinensis HOM05D004723 ORTHO05D006176 2.1e-07 62.0 92 45.7
Nn1g05556 Nelumbo nucifera HOM05D004723 ORTHO05D006176 3.5e-07 61.2 48 56.2
FAN17G1680 Fragaria x ananassa HOM05D032679 ORTHO05D022627 3.9e-06 57.8 70 41.4
FAN24G3340 Fragaria x ananassa HOM05D032679 ORTHO05D022627 3.9e-06 57.8 70 41.4
FAN03G2005 Fragaria x ananassa HOM05D004723 ORTHO05D002269 5.1e-06 57.4 79 43.0
FAN22G1655 Fragaria x ananassa HOM05D002244 ORTHO05D035452 6.7e-06 57.0 79 43.0
Eucgr.C02078 Eucalyptus grandis HOM05D000238 ORTHO05D010253 8.7e-06 56.6 40 62.5


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