Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.DFZ8YY Arachis hypogaea HOM05D001070 ORTHO05D002096 2.8e-32 141.4 71 100.0
PSO541G0682 Papaver somniferum HOM05D001070 ORTHO05D002096 5.2e-07 57.4 39 69.2
CiPaw.01G098400 Carya illinoinensis HOM05D001070 ORTHO05D002096 1.2e-06 56.2 39 69.2
Potri.011G073900 Populus trichocarpa HOM05D001070 ORTHO05D002096 1.2e-06 56.2 39 69.2
RcHm_v2.0_Chr4g0392781 Rosa chinensis HOM05D001070 ORTHO05D002096 1.2e-06 56.2 39 69.2
MELO3C030628.2 Cucumis melo HOM05D001070 ORTHO05D002096 1.5e-06 55.8 39 66.7
AL7G50370 Arabidopsis lyrata HOM05D001070 ORTHO05D002096 3.4e-06 54.7 39 66.7
BcaC04g20701 Brassica carinata HOM05D001070 ORTHO05D002096 3.4e-06 54.7 39 66.7
A04p09360 Brassica napus HOM05D001070 ORTHO05D002096 3.4e-06 54.7 39 66.7
BolC2t10590H Brassica oleracea HOM05D001070 ORTHO05D002096 3.4e-06 54.7 39 66.7
BolSC28t60312H Brassica oleracea HOM05D001070 ORTHO05D002096 3.4e-06 54.7 39 66.7
BolSC28t60368H Brassica oleracea HOM05D001070 ORTHO05D002096 3.4e-06 54.7 39 66.7
BolSC29t60500H Brassica oleracea HOM05D001070 ORTHO05D002096 3.4e-06 54.7 39 66.7
BolSC29t60620H Brassica oleracea HOM05D001070 ORTHO05D002096 3.4e-06 54.7 39 66.7
BolSC29t60623H Brassica oleracea HOM05D001070 ORTHO05D002096 3.4e-06 54.7 39 66.7
BolSC35t60697H Brassica oleracea HOM05D001070 ORTHO05D002096 3.4e-06 54.7 39 66.7
BolSC35t60698H Brassica oleracea HOM05D001070 ORTHO05D002096 3.4e-06 54.7 39 66.7
BolSC35t60710H Brassica oleracea HOM05D001070 ORTHO05D002096 3.4e-06 54.7 39 66.7
BolSC37t60788H Brassica oleracea HOM05D001070 ORTHO05D002096 3.4e-06 54.7 39 66.7
BolSC44t60817H Brassica oleracea HOM05D001070 ORTHO05D002096 3.4e-06 54.7 39 66.7
BolSC44t60828H Brassica oleracea HOM05D001070 ORTHO05D002096 3.4e-06 54.7 39 66.7
BolSC45t60915H Brassica oleracea HOM05D001070 ORTHO05D002096 3.4e-06 54.7 39 66.7
BolSC46t60964H Brassica oleracea HOM05D001070 ORTHO05D002096 3.4e-06 54.7 39 66.7
BraSC103t45423Z Brassica rapa HOM05D001070 ORTHO05D002096 3.4e-06 54.7 39 66.7
BraSC138t45540Z Brassica rapa HOM05D001070 ORTHO05D002096 3.4e-06 54.7 39 66.7
BraSC159t45727Z Brassica rapa HOM05D001070 ORTHO05D002096 3.4e-06 54.7 39 66.7
BraSC25t45916Z Brassica rapa HOM05D001070 ORTHO05D002096 3.4e-06 54.7 39 66.7
BraSC48t46237Z Brassica rapa HOM05D001070 ORTHO05D002096 3.4e-06 54.7 39 66.7
BraSC54t46367Z Brassica rapa HOM05D001070 ORTHO05D002096 3.4e-06 54.7 39 66.7
CARHR282400 Cardamine hirsuta HOM05D001070 ORTHO05D002096 3.4e-06 54.7 39 66.7
DCAR_032544 Daucus carota HOM05D001070 ORTHO05D002096 3.4e-06 54.7 39 66.7
Migut.D01245 Erythranthe guttata HOM05D001070 ORTHO05D002096 3.4e-06 54.7 39 66.7
PGR081G0002 Punica granatum HOM05D001070 ORTHO05D002096 3.4e-06 54.7 39 66.7
PGR111G0057 Punica granatum HOM05D001070 ORTHO05D002096 3.4e-06 54.7 39 66.7
SalBow1G3373 Salvia bowleyana HOM05D001070 ORTHO05D002096 3.4e-06 54.7 39 66.7
SalBow1G6555 Salvia bowleyana HOM05D001070 ORTHO05D002096 3.4e-06 54.7 39 66.7
AT2G07739 Arabidopsis thaliana HOM05D001070 ORTHO05D002096 4.4e-06 54.3 34 73.5
ATMG00370 Arabidopsis thaliana HOM05D001070 ORTHO05D002096 4.4e-06 54.3 34 73.5
EL10Ac5g11665 Beta vulgaris HOM05D001070 ORTHO05D002096 4.4e-06 54.3 39 66.7
EL10Ac7g17376 Beta vulgaris HOM05D001070 ORTHO05D002096 4.4e-06 54.3 39 66.7
Ciclev10010879m.g Citrus clementina HOM05D001070 ORTHO05D002096 5.8e-06 53.9 39 66.7
Ciclev10013978m.g Citrus clementina HOM05D001070 ORTHO05D002096 5.8e-06 53.9 39 66.7
Ciclev10013980m.g Citrus clementina HOM05D001070 ORTHO05D002096 5.8e-06 53.9 39 66.7
Ciclev10013987m.g Citrus clementina HOM05D001070 ORTHO05D002096 5.8e-06 53.9 39 66.7
Ciclev10014002m.g Citrus clementina HOM05D001070 ORTHO05D002096 5.8e-06 53.9 39 66.7
Ciclev10014005m.g Citrus clementina HOM05D001070 ORTHO05D002096 5.8e-06 53.9 39 66.7
Ciclev10027654m.g Citrus clementina HOM05D001070 ORTHO05D002096 5.8e-06 53.9 39 66.7
Ciclev10030452m.g Citrus clementina HOM05D001070 ORTHO05D002096 5.8e-06 53.9 39 66.7
Nn029s41580 Nelumbo nucifera HOM05D001070 ORTHO05D002096 5.8e-06 53.9 39 66.7
Nn031s41609 Nelumbo nucifera HOM05D001070 ORTHO05D002096 5.8e-06 53.9 39 66.7
Nn064s42217 Nelumbo nucifera HOM05D001070 ORTHO05D002096 5.8e-06 53.9 39 66.7
Nn1g08628 Nelumbo nucifera HOM05D001070 ORTHO05D002096 5.8e-06 53.9 39 66.7
Nn212s45207 Nelumbo nucifera HOM05D001070 ORTHO05D002096 5.8e-06 53.9 39 66.7
Nn304s46233 Nelumbo nucifera HOM05D001070 ORTHO05D002096 5.8e-06 53.9 39 66.7
PSO210G1984 Papaver somniferum HOM05D001070 ORTHO05D002096 5.8e-06 53.9 39 66.7
PSO548G0067 Papaver somniferum HOM05D001070 ORTHO05D002096 5.8e-06 53.9 39 66.7
TAR633G1337 Trochodendron aralioides HOM05D001070 ORTHO05D002096 5.8e-06 53.9 39 66.7
C09p40290 Brassica napus HOM05D001070 ORTHO05D002096 9.9e-06 53.1 37 67.6
CAN.G929.2 Capsicum annuum HOM05D001070 ORTHO05D002096 9.9e-06 53.1 39 64.1
FAN13G2309 Fragaria x ananassa HOM05D001070 ORTHO05D002096 9.9e-06 53.1 53 52.8
Peaxi162Scf00080g00524 Petunia axillaris HOM05D001070 ORTHO05D002096 9.9e-06 53.1 39 64.1
Peaxi162Scf00139g00015 Petunia axillaris HOM05D001070 ORTHO05D002096 9.9e-06 53.1 39 64.1
RcHm_v2.0_Chr7g0221181 Rosa chinensis HOM05D001070 ORTHO05D002096 9.9e-06 53.1 39 66.7
Solyc00g500043.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 9.9e-06 53.1 39 64.1
Solyc00g500084.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 9.9e-06 53.1 39 64.1
Solyc00g500126.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 9.9e-06 53.1 39 64.1
Solyc00g500196.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 9.9e-06 53.1 39 64.1
Solyc00g500278.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 9.9e-06 53.1 39 64.1


User provided reference genes

Program Settings