Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.DF0SS3 Arachis hypogaea HOM05D005553 ORTHO05D006866 5.3e-226 787.3 396 100.0
arahy.Tifrunner.gnm1.ann1.ET68I8 Arachis hypogaea HOM05D005553 ORTHO05D006866 1.3e-171 606.7 413 79.7
arahy.Tifrunner.gnm1.ann1.SPK719 Arachis hypogaea HOM05D005553 ORTHO05D006866 4.9e-155 551.6 391 75.2
arahy.Tifrunner.gnm1.ann1.YI9T1V Arachis hypogaea HOM05D005553 ORTHO05D006866 1.6e-142 510.0 398 70.6
arahy.Tifrunner.gnm1.ann1.T3HSIJ Arachis hypogaea HOM05D005553 ORTHO05D006866 1.8e-128 463.4 355 69.6
arahy.Tifrunner.gnm1.ann1.K25WW2 Arachis hypogaea HOM05D005553 ORTHO05D006866 1.7e-126 456.8 355 68.7
Lalb_Chr03g0041571 Lupinus albus HOM05D005553 ORTHO05D006866 4.4e-87 325.9 337 54.6
arahy.Tifrunner.gnm1.ann1.B0WXN9 Arachis hypogaea HOM05D005553 ORTHO05D006866 1.7e-86 323.9 344 54.7
arahy.Tifrunner.gnm1.ann1.UUY44J Arachis hypogaea HOM05D005553 ORTHO05D006866 2.7e-84 316.6 359 53.2
Lj1g0021333 Lotus japonicus HOM05D005553 ORTHO05D006866 1.0e-83 314.7 338 53.0
Phvul.008G130400 Phaseolus vulgaris HOM05D005553 ORTHO05D006866 5.6e-82 308.9 336 52.4
Glyma.18G166600 Glycine max HOM05D005553 ORTHO05D006866 1.6e-81 307.4 337 51.0
Ca_24091_v3 Cicer arietinum L. HOM05D005553 ORTHO05D006866 1.4e-80 304.3 334 51.8
VMungo1383G1602 Vigna mungo HOM05D005553 ORTHO05D006866 1.2e-79 301.2 337 51.0
arahy.Tifrunner.gnm1.ann1.62F6YN Arachis hypogaea HOM05D005553 ORTHO05D006866 1.5e-79 300.8 328 53.0
Glyma.08G349700 Glycine max HOM05D005553 ORTHO05D006866 2.6e-79 300.1 337 51.3
arahy.Tifrunner.gnm1.ann1.84RPTF Arachis hypogaea HOM05D005553 ORTHO05D006866 1.3e-78 297.7 340 52.1
Medtr7g056117 Medicago truncatula HOM05D005553 ORTHO05D006866 1.1e-77 294.7 338 50.6
Psat3g147960 Pisum sativum HOM05D005553 ORTHO05D006866 1.7e-75 287.3 340 50.6
TPR.G6452 Trifolium pratense HOM05D005553 ORTHO05D006866 1.1e-72 278.1 362 46.4
Haze_24835 Corylus avellana HOM05D005553 ORTHO05D006866 1.1e-69 268.1 351 46.4
Cfa002842 Carpinus fangiana HOM05D005553 ORTHO05D006866 3.2e-69 266.5 352 46.0
Haze_24838 Corylus avellana HOM05D005553 ORTHO05D006866 7.1e-69 265.4 351 46.2
CSS0038931 Camellia sinensis var. sinensis HOM05D005553 ORTHO05D006866 6.6e-67 258.8 337 44.2
CiPaw.03G146800 Carya illinoinensis HOM05D005553 ORTHO05D006866 8.6e-67 258.5 347 44.7
CANSAT01G0440 Cannabis sativa HOM05D005553 ORTHO05D006866 1.5e-66 257.7 362 43.1
MD10G1161200 Malus domestica HOM05D005553 ORTHO05D006866 1.5e-66 257.7 358 44.1
Prupe.8G200200 Prunus persica HOM05D005553 ORTHO05D006866 1.9e-66 257.3 360 43.1
Dinv12662 Davidia involucrata HOM05D005553 ORTHO05D006866 3.6e-65 253.1 364 42.9
CSS0002030 Camellia sinensis var. sinensis HOM05D005553 ORTHO05D006866 1.2e-63 248.1 355 41.1
PGSC0003DMG400017493 Solanum tuberosum HOM05D005553 ORTHO05D006866 1.7e-62 244.2 301 45.2
Atru.chr6.1417 Acer truncatum HOM05D005553 ORTHO05D006866 8.4e-62 241.9 259 50.2
Solyc09g059600.4 Solanum lycopersicum HOM05D005553 ORTHO05D006866 1.1e-61 241.5 301 44.5
Sopen09g022770 Solanum pennellii HOM05D005553 ORTHO05D006866 1.1e-61 241.5 301 44.5
Nn1g07927 Nelumbo nucifera HOM05D005553 ORTHO05D006866 1.4e-61 241.1 361 41.8
Sp3g06120 Schrenkiella parvula HOM05D005553 ORTHO05D006866 1.4e-61 241.1 366 42.3
GSVIVG01038357001 Vitis vinifera HOM05D005553 ORTHO05D006866 1.9e-61 240.7 329 44.1
BraA05t22829Z Brassica rapa HOM05D005553 ORTHO05D006866 7.1e-61 238.8 298 48.0
QL09p052121 Quercus lobata HOM05D005553 ORTHO05D006866 7.1e-61 238.8 334 45.5
Hma1.2p1_1018F.1_g248400 Hydrangea macrophylla HOM05D005553 ORTHO05D006866 9.2e-61 238.4 257 51.4
PGR044G2083 Punica granatum HOM05D005553 ORTHO05D006866 9.2e-61 238.4 286 45.8
MELO3C020015.2 Cucumis melo HOM05D005553 ORTHO05D006866 1.2e-60 238.0 362 40.1
Ciclev10019403m.g Citrus clementina HOM05D005553 ORTHO05D006866 1.6e-60 237.7 312 46.5
Lj2A1127T50 Lonicera japonica HOM05D005553 ORTHO05D006866 2.7e-60 236.9 366 40.7
Oeu023098.1 Olea europaea HOM05D005553 ORTHO05D006866 2.7e-60 236.9 359 40.9
A05p41030 Brassica napus HOM05D005553 ORTHO05D006866 3.5e-60 236.5 295 48.1
BcaC05g29748 Brassica carinata HOM05D005553 ORTHO05D006866 4.6e-60 236.1 291 47.8
QL09p052989 Quercus lobata HOM05D005553 ORTHO05D006866 6.0e-60 235.7 259 52.1
TWI36G0825 Tripterygium wilfordii HOM05D005553 ORTHO05D006866 1.7e-59 234.2 347 43.2
Cpa.g.sc8.131 Carica papaya HOM05D005553 ORTHO05D006866 3.0e-59 233.4 367 42.2
RcHm_v2.0_Chr6g0284311 Rosa chinensis HOM05D005553 ORTHO05D006866 5.1e-59 232.6 344 43.3
CsaV3_6G002380 Cucumis sativus L. HOM05D005553 ORTHO05D006866 6.6e-59 232.3 358 39.7
THA.LOC104818968 Tarenaya hassleriana HOM05D005553 ORTHO05D006866 8.7e-59 231.9 363 41.6
HanXRQChr07g0189551 Helianthus annuus HOM05D005553 ORTHO05D006866 1.1e-58 231.5 357 40.6
C05p60190 Brassica napus HOM05D005553 ORTHO05D006866 1.5e-58 231.1 291 48.1
BolC5t34669H Brassica oleracea HOM05D005553 ORTHO05D006866 1.5e-58 231.1 291 48.1
vmacro14742 Vaccinium macrocarpon HOM05D005553 ORTHO05D006866 1.5e-58 231.1 303 44.9
COL.COLO4_15644 Corchorus olitorius HOM05D005553 ORTHO05D006866 1.9e-58 230.7 268 49.3
Manes.13G047900 Manihot esculenta HOM05D005553 ORTHO05D006866 1.9e-58 230.7 287 47.7
Rhsim01G0254300 Rhododendron simsii HOM05D005553 ORTHO05D006866 1.9e-58 230.7 277 47.7
BcaC05g29847 Brassica carinata HOM05D005553 ORTHO05D006866 2.5e-58 230.3 291 48.1
Cc01_g16820 Coffea canephora HOM05D005553 ORTHO05D006866 2.5e-58 230.3 349 41.3
Sed0021986 Sechium edule HOM05D005553 ORTHO05D006866 2.5e-58 230.3 360 40.6
Dinv19184 Davidia involucrata HOM05D005553 ORTHO05D006866 3.3e-58 229.9 291 45.0
Peaxi162Scf00238g00217 Petunia axillaris HOM05D005553 ORTHO05D006866 3.3e-58 229.9 238 51.3
MSTRG.17999 Avicennia marina HOM05D005553 ORTHO05D006866 5.6e-58 229.2 294 45.2
FAN27G0725 Fragaria x ananassa HOM05D005553 ORTHO05D006866 7.3e-58 228.8 343 41.4
Thhalv10020331m.g Eutrema salsugineum HOM05D005553 ORTHO05D006866 9.6e-58 228.4 295 47.8
AL3G18430 Arabidopsis lyrata HOM05D005553 ORTHO05D006866 1.6e-57 227.6 297 46.1
Carub.0003s0670 Capsella rubella HOM05D005553 ORTHO05D006866 1.6e-57 227.6 314 44.9
DCAR_023559 Daucus carota HOM05D005553 ORTHO05D006866 2.1e-57 227.3 358 41.1
TAR365G1156 Trochodendron aralioides HOM05D005553 ORTHO05D006866 2.8e-57 226.9 290 46.6
CAN.G5.44 Capsicum annuum HOM05D005553 ORTHO05D006866 4.8e-57 226.1 303 42.9
Aqoxy2G03234 Aquilegia oxysepala HOM05D005553 ORTHO05D006866 6.2e-57 225.7 291 43.6
Eucgr.K02143 Eucalyptus grandis HOM05D005553 ORTHO05D006866 6.2e-57 225.7 355 39.7
Potri.002G245000 Populus trichocarpa HOM05D005553 ORTHO05D006866 1.4e-56 224.6 306 44.8
SalBow3G3653 Salvia bowleyana HOM05D005553 ORTHO05D006866 1.4e-56 224.6 315 42.2
ECA247G0750 Erigeron canadensis HOM05D005553 ORTHO05D006866 3.1e-56 223.4 260 50.4
Thecc.01G222300 Theobroma cacao HOM05D005553 ORTHO05D006866 3.1e-56 223.4 348 42.2
AT3G07180 Arabidopsis thaliana HOM05D005553 ORTHO05D006866 5.3e-56 222.6 366 40.4
FvH4_2g18680 Fragaria vesca HOM05D005553 ORTHO05D006866 5.3e-56 222.6 227 51.5
FAN24G0205 Fragaria x ananassa HOM05D005553 ORTHO05D006866 5.3e-56 222.6 227 51.5
Migut.N00626 Erythranthe guttata HOM05D005553 ORTHO05D006866 9.0e-56 221.9 310 43.2
AL384U10020 Arabidopsis lyrata HOM05D005553 ORTHO05D006866 4.4e-55 219.5 366 39.9
FAN15G3597 Fragaria x ananassa HOM05D005553 ORTHO05D006866 4.4e-55 219.5 347 40.3
PSO339G3667 Papaver somniferum HOM05D005553 ORTHO05D006866 4.4e-55 219.5 370 37.3
CARHR081820 Cardamine hirsuta HOM05D005553 ORTHO05D006866 9.9e-55 218.4 361 40.4
Aa31LG5G17740 Aethionema arabicum HOM05D005553 ORTHO05D006866 1.3e-54 218.0 368 41.0
Gohir.A07G200000 Gossypium hirsutum HOM05D005553 ORTHO05D006866 1.7e-54 217.6 352 41.2
PSO063G5023 Papaver somniferum HOM05D005553 ORTHO05D006866 2.9e-54 216.9 331 39.6
Sabra02G0186400 Salix brachista HOM05D005553 ORTHO05D006866 2.9e-54 216.9 305 43.6
Gorai.001G232700 Gossypium raimondii HOM05D005553 ORTHO05D006866 8.4e-54 215.3 362 40.6
Nitab4.5_0000045g0420 Nicotiana tabacum HOM05D005553 ORTHO05D006866 8.4e-54 215.3 327 40.7
Nitab4.5_0000345g0010 Nicotiana tabacum HOM05D005553 ORTHO05D006866 1.1e-53 214.9 332 40.7
PSO782G3165 Papaver somniferum HOM05D005553 ORTHO05D006866 1.4e-53 214.5 365 37.8
Gohir.D07G206400 Gossypium hirsutum HOM05D005553 ORTHO05D006866 3.2e-53 213.4 351 41.3
Hund05570 Selenicereus undatus HOM05D005553 ORTHO05D006866 1.2e-52 211.5 266 45.5
Sc05g0002010 Simmondsia chinensis HOM05D005553 ORTHO05D006866 2.1e-52 210.7 285 42.8
Duzib138G1946 Durio zibethinus HOM05D005553 ORTHO05D006866 4.6e-52 209.5 214 53.7
Lsat_1_v5_gn_9_13060 Lactuca sativa HOM05D005553 ORTHO05D006866 6.0e-52 209.1 290 43.4
Duzib211G0174 Durio zibethinus HOM05D005553 ORTHO05D006866 7.8e-52 208.8 273 46.9
MBI06_g04543_MAGBIO Magnolia biondii HOM05D005553 ORTHO05D006866 1.0e-51 208.4 293 44.0
Ah.08g214520 Amaranthus hybridus HOM05D005553 ORTHO05D006866 1.3e-51 208.0 278 42.8
Os01g0907300 Oryza sativa ssp. japonica HOM05D005553 ORTHO05D006866 2.1e-49 200.7 261 44.4
ATR0609G062 Amborella trichopoda HOM05D005553 ORTHO05D006866 2.6e-47 193.7 297 40.1
Zm00001eb365330 Zea mays HOM05D005553 ORTHO05D006866 5.8e-47 192.6 284 41.5
SHI14561 Sapria himalayana HOM05D005553 ORTHO05D006866 8.4e-46 188.7 356 37.6
CDE08G1475 Ceratophyllum demersum HOM05D005553 ORTHO05D006866 9.3e-45 185.3 358 32.4
ClCG09G008830 Citrullus lanatus HOM05D005553 ORTHO05D006866 3.0e-43 180.3 361 34.1
QL05p022419 Quercus lobata HOM05D005553 ORTHO05D006866 3.9e-43 179.9 207 48.8
Actinidia23714 Actinidia chinensis HOM05D005553 ORTHO05D006866 1.6e-41 174.5 255 41.2
QL02p097148 Quercus lobata HOM05D005553 ORTHO05D006866 2.8e-41 173.7 206 48.5
EL10Ac7g17878 Beta vulgaris HOM05D005553 ORTHO05D006866 2.4e-40 170.6 351 35.3
Potri.002G244801 Populus trichocarpa HOM05D005553 ORTHO05D006866 1.5e-39 167.9 172 53.5
Actinidia09473 Actinidia chinensis HOM05D005553 ORTHO05D006866 5.8e-39 166.0 144 59.7
arahy.Tifrunner.gnm1.ann1.6EF6C9 Arachis hypogaea HOM05D010413 ORTHO05D014444 2.5e-34 150.6 88 92.0
AUR62001118 Chenopodium quinoa HOM05D005553 ORTHO05D006866 4.8e-33 146.4 287 32.8
arahy.Tifrunner.gnm1.ann1.QTEC4T Arachis hypogaea HOM05D010413 ORTHO05D014444 2.6e-31 140.6 88 87.5
arahy.Tifrunner.gnm1.ann1.IHLS5N Arachis hypogaea HOM05D010413 ORTHO05D014444 5.8e-31 139.4 88 86.4
Pp3c13_19160 Physcomitrium patens HOM05D005553 ORTHO05D006866 2.2e-30 137.5 220 38.6
unitig_0.g372 Utricularia gibba HOM05D005553 ORTHO05D006866 3.2e-29 133.7 263 33.1
arahy.Tifrunner.gnm1.ann1.1YB8F2 Arachis hypogaea HOM05D010413 ORTHO05D014444 3.5e-28 130.2 88 83.0
SMO353G0187 Selaginella moellendorffii HOM05D005553 ORTHO05D006866 3.5e-28 130.2 285 32.3
arahy.Tifrunner.gnm1.ann1.GJFK11 Arachis hypogaea HOM05D010413 ORTHO05D087099 2.5e-26 124.0 88 81.8
DCAR_000631 Daucus carota HOM05D005553 ORTHO05D006866 9.7e-26 122.1 357 29.4
Mapoly0045s0104 Marchantia polymorpha HOM05D005553 ORTHO05D006866 8.2e-25 119.0 223 33.6
HPP92_001410 Vanilla planifolia HOM05D005553 ORTHO05D006866 7.7e-23 112.5 171 42.7
arahy.Tifrunner.gnm1.ann1.J0URVC Arachis hypogaea HOM05D010413 ORTHO05D014444 1.3e-22 111.7 87 75.9
AagrBONN_evm.TU.Sc2ySwM_117.1632 Anthoceros agrestis HOM05D005553 ORTHO05D006866 5.0e-22 109.8 278 29.1
CBR_g46590 Chara braunii HOM05D005553 ORTHO05D006866 1.1e-21 108.6 171 39.8
AUR62016558 Chenopodium quinoa HOM05D005553 ORTHO05D006866 2.5e-21 107.5 232 33.6
arahy.Tifrunner.gnm1.ann1.25R2K9 Arachis hypogaea HOM05D005984 ORTHO05D014444 7.2e-21 105.9 88 69.3
arahy.Tifrunner.gnm1.ann1.B9R6EW Arachis hypogaea HOM05D005984 ORTHO05D014444 2.0e-18 97.8 88 65.9
arahy.Tifrunner.gnm1.ann1.CL1AA5 Arachis hypogaea HOM05D010413 ORTHO05D014444 2.0e-15 87.8 55 81.8
arahy.Tifrunner.gnm1.ann1.AUS62E Arachis hypogaea HOM05D010413 ORTHO05D014444 8.5e-14 82.4 51 82.4
arahy.Tifrunner.gnm1.ann1.YK0CAK Arachis hypogaea HOM05D025444 ORTHO05D085151 1.1e-13 82.0 85 64.7
arahy.Tifrunner.gnm1.ann1.KG0P24 Arachis hypogaea HOM05D025444 ORTHO05D087529 4.2e-13 80.1 85 64.7
arahy.Tifrunner.gnm1.ann1.T67Q9P Arachis hypogaea HOM05D010413 ORTHO05D014444 4.2e-13 80.1 45 93.3
arahy.Tifrunner.gnm1.ann1.NXC8T0 Arachis hypogaea HOM05D025444 ORTHO05D086225 7.2e-13 79.3 85 63.5
arahy.Tifrunner.gnm1.ann1.BQA8LP Arachis hypogaea HOM05D025444 ORTHO05D084027 9.4e-13 79.0 85 63.5
HPP92_001419 Vanilla planifolia HOM05D005553 ORTHO05D008496 9.4e-13 79.0 53 60.4
arahy.Tifrunner.gnm1.ann1.4E64VF Arachis hypogaea HOM05D010413 ORTHO05D087745 1.2e-12 78.6 45 91.1
arahy.Tifrunner.gnm1.ann1.MPAX92 Arachis hypogaea HOM05D010413 ORTHO05D014444 2.7e-12 77.4 45 88.9
arahy.Tifrunner.gnm1.ann1.HYYZ0X Arachis hypogaea HOM05D010413 ORTHO05D014444 3.6e-12 77.0 45 91.1
arahy.Tifrunner.gnm1.ann1.FWSD6F Arachis hypogaea HOM05D010413 ORTHO05D019779 1.8e-11 74.7 45 86.7
arahy.Tifrunner.gnm1.ann1.L111E7 Arachis hypogaea HOM05D010413 ORTHO05D014444 3.0e-11 73.9 45 86.7
EL10Ac7g17877 Beta vulgaris HOM05D005553 ORTHO05D006866 5.1e-11 73.2 64 53.1
arahy.Tifrunner.gnm1.ann1.1IC9XV Arachis hypogaea HOM05D010413 ORTHO05D002299 8.8e-11 72.4 45 88.9
arahy.Tifrunner.gnm1.ann1.M7HUWS Arachis hypogaea HOM05D002233 ORTHO05D002299 8.8e-11 72.4 45 88.9
arahy.Tifrunner.gnm1.ann1.ME0VC2 Arachis hypogaea HOM05D010413 ORTHO05D085118 8.8e-11 72.4 45 88.9
arahy.Tifrunner.gnm1.ann1.UH56EU Arachis hypogaea HOM05D002233 ORTHO05D002299 8.8e-11 72.4 45 88.9
arahy.Tifrunner.gnm1.ann1.UPI3MA Arachis hypogaea HOM05D003834 ORTHO05D004483 2.0e-10 71.2 45 84.4
SEGI_34191 Sequoiadendron giganteum HOM05D005553 ORTHO05D006866 5.7e-10 69.7 61 49.2
arahy.Tifrunner.gnm1.ann1.M9QEPL Arachis hypogaea HOM05D010413 ORTHO05D002299 7.4e-10 69.3 45 86.7
arahy.Tifrunner.gnm1.ann1.N5UMPG Arachis hypogaea HOM05D026890 ORTHO05D084813 9.7e-10 68.9 76 60.5
arahy.Tifrunner.gnm1.ann1.LT36IY Arachis hypogaea HOM05D010413 ORTHO05D014444 1.2e-07 62.0 46 80.4
arahy.Tifrunner.gnm1.ann1.RLV9X9 Arachis hypogaea HOM05D000054 ORTHO05D001371 2.0e-07 61.2 53 67.9
arahy.Tifrunner.gnm1.ann1.MLET4L Arachis hypogaea HOM05D000054 ORTHO05D083142 3.5e-07 60.5 40 85.0
arahy.Tifrunner.gnm1.ann1.WT0C32 Arachis hypogaea HOM05D000207 ORTHO05D014448 1.0e-06 58.9 39 84.6
arahy.Tifrunner.gnm1.ann1.X9D9S7 Arachis hypogaea HOM05D001287 ORTHO05D002418 1.0e-06 58.9 42 81.0
arahy.Tifrunner.gnm1.ann1.YRL4N9 Arachis hypogaea HOM05D000043 ORTHO05D001371 1.0e-06 58.9 39 84.6
arahy.Tifrunner.gnm1.ann1.11RBMI Arachis hypogaea HOM05D004530 ORTHO05D085463 1.7e-06 58.2 43 76.7
arahy.Tifrunner.gnm1.ann1.CXSI0G Arachis hypogaea HOM05D000290 ORTHO05D002418 1.7e-06 58.2 43 72.1
arahy.Tifrunner.gnm1.ann1.T8K23Z Arachis hypogaea HOM05D000043 ORTHO05D001371 1.7e-06 58.2 43 76.7
arahy.Tifrunner.gnm1.ann1.XZ6HV0 Arachis hypogaea HOM05D000043 ORTHO05D013763 2.9e-06 57.4 43 74.4
arahy.Tifrunner.gnm1.ann1.QJJN22 Arachis hypogaea HOM05D000054 ORTHO05D082761 3.8e-06 57.0 40 80.0
arahy.Tifrunner.gnm1.ann1.V1REB0 Arachis hypogaea HOM05D000054 ORTHO05D086102 6.5e-06 56.2 36 88.9


User provided reference genes

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