Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.DEI7NY Arachis hypogaea HOM05D007092 ORTHO05D008947 2.8e-47 191.4 86 100.0
arahy.Tifrunner.gnm1.ann1.NXC5E0 Arachis hypogaea HOM05D007092 ORTHO05D008947 1.4e-46 189.1 84 100.0
arahy.Tifrunner.gnm1.ann1.U4SUAB Arachis hypogaea HOM05D007092 ORTHO05D008947 1.3e-44 182.6 84 97.6
arahy.Tifrunner.gnm1.ann1.2I6Q5Y Arachis hypogaea HOM05D007092 ORTHO05D008947 2.9e-44 181.4 84 96.4
arahy.Tifrunner.gnm1.ann1.65RD4S Arachis hypogaea HOM05D007092 ORTHO05D008947 2.5e-43 178.3 84 96.4
Phvul.008G255700 Phaseolus vulgaris HOM05D007092 ORTHO05D008947 9.7e-40 166.4 85 82.4
VMungo0647G0167 Vigna mungo HOM05D007092 ORTHO05D008947 2.2e-39 165.2 85 80.0
Glyma.07G003900 Glycine max HOM05D007092 ORTHO05D008947 1.8e-38 162.2 85 80.0
Prupe.3G167100 Prunus persica HOM05D007092 ORTHO05D008947 4.1e-38 161.0 85 77.6
MD09G1158700 Malus domestica HOM05D007092 ORTHO05D008947 2.6e-37 158.3 85 75.3
TPR.G38753 Trifolium pratense HOM05D007092 ORTHO05D008947 3.5e-37 157.9 81 79.0
Ca_20954_v3 Cicer arietinum L. HOM05D007092 ORTHO05D008947 5.9e-37 157.1 86 76.7
Lj3g0013116 Lotus japonicus HOM05D007092 ORTHO05D008947 5.9e-37 157.1 83 79.5
RcHm_v2.0_Chr2g0150121 Rosa chinensis HOM05D007092 ORTHO05D008947 5.9e-37 157.1 85 74.1
Gohir.A10G007400 Gossypium hirsutum HOM05D007092 ORTHO05D008947 1.0e-36 156.4 84 78.6
Medtr4g006030 Medicago truncatula HOM05D007092 ORTHO05D008947 1.0e-36 156.4 85 75.3
CANSAT01G0482 Cannabis sativa HOM05D007092 ORTHO05D008947 1.3e-36 156.0 81 79.0
Gohir.D10G007300 Gossypium hirsutum HOM05D007092 ORTHO05D008947 2.2e-36 155.2 84 77.4
QL05p083231 Quercus lobata HOM05D007092 ORTHO05D008947 2.2e-36 155.2 84 76.2
Lalb_Chr04g0264731 Lupinus albus HOM05D007092 ORTHO05D008947 3.8e-36 154.5 85 76.5
Gorai.011G008000 Gossypium raimondii HOM05D007092 ORTHO05D008947 5.0e-36 154.1 81 79.0
FAN02G1258 Fragaria x ananassa HOM05D007092 ORTHO05D008947 1.1e-35 152.9 85 71.8
Thecc.06G015800 Theobroma cacao HOM05D007092 ORTHO05D008947 1.4e-35 152.5 81 80.2
Ciclev10026125m.g Citrus clementina HOM05D007092 ORTHO05D008947 2.5e-35 151.8 81 76.5
PGR102G2093 Punica granatum HOM05D007092 ORTHO05D008947 4.2e-35 151.0 80 77.5
FvH4_6g37290 Fragaria vesca HOM05D007092 ORTHO05D008947 5.5e-35 150.6 85 69.4
PSO063G1240 Papaver somniferum HOM05D007092 ORTHO05D008947 7.2e-35 150.2 83 73.5
SalBow6G0042 Salvia bowleyana HOM05D007092 ORTHO05D008947 1.2e-34 149.4 84 73.8
Atru.chr1.2779 Acer truncatum HOM05D007092 ORTHO05D008947 1.6e-34 149.1 81 76.5
Migut.I01177 Erythranthe guttata HOM05D007092 ORTHO05D008947 2.1e-34 148.7 84 73.8
Eucgr.F04011 Eucalyptus grandis HOM05D007092 ORTHO05D008947 2.1e-34 148.7 81 74.1
Glyma.08G222700 Glycine max HOM05D007092 ORTHO05D008947 2.1e-34 148.7 85 74.1
Haze_15817 Corylus avellana HOM05D007092 ORTHO05D008947 4.7e-34 147.5 84 72.6
Nitab4.5_0008628g0030 Nicotiana tabacum HOM05D007092 ORTHO05D008947 4.7e-34 147.5 83 72.3
GSVIVG01016136001 Vitis vinifera HOM05D007092 ORTHO05D008947 4.7e-34 147.5 86 69.8
CsaV3_7G033820 Cucumis sativus L. HOM05D007092 ORTHO05D008947 8.0e-34 146.7 81 72.8
Duzib160G0445 Durio zibethinus HOM05D007092 ORTHO05D008947 8.0e-34 146.7 81 76.5
CSS0038887 Camellia sinensis var. sinensis HOM05D007092 ORTHO05D008947 1.0e-33 146.4 84 70.2
HanXRQChr10g0311491 Helianthus annuus HOM05D007092 ORTHO05D008947 1.0e-33 146.4 84 72.6
MBI14_g30703_MAGBIO Magnolia biondii HOM05D007092 ORTHO05D008947 1.0e-33 146.4 81 74.1
Dinv37796 Davidia involucrata HOM05D007092 ORTHO05D008947 1.4e-33 146.0 84 71.4
Nitab4.5_0002661g0010 Nicotiana tabacum HOM05D007092 ORTHO05D008947 1.4e-33 146.0 83 71.1
Hund18612 Selenicereus undatus HOM05D007092 ORTHO05D008947 1.4e-33 146.0 83 72.3
ClCG09G001510 Citrullus lanatus HOM05D007092 ORTHO05D008947 1.8e-33 145.6 81 72.8
Manes.01G181400 Manihot esculenta HOM05D007092 ORTHO05D008947 1.8e-33 145.6 80 73.8
Aa31LG4G3360 Aethionema arabicum HOM05D007092 ORTHO05D008947 2.3e-33 145.2 82 67.1
AL2G32840 Arabidopsis lyrata HOM05D007092 ORTHO05D008947 2.3e-33 145.2 82 69.5
AT1G73090 Arabidopsis thaliana HOM05D007092 ORTHO05D008947 2.3e-33 145.2 82 69.5
Cfa021192 Carpinus fangiana HOM05D007092 ORTHO05D008947 2.3e-33 145.2 84 71.4
Hma1.2p1_1104F.1_g257360 Hydrangea macrophylla HOM05D007092 ORTHO05D008947 2.3e-33 145.2 81 72.8
Sc12g0010950 Simmondsia chinensis HOM05D007092 ORTHO05D008947 2.3e-33 145.2 81 70.4
EL10Ac7g18225 Beta vulgaris HOM05D007092 ORTHO05D008947 3.0e-33 144.8 81 72.8
CARHR066060 Cardamine hirsuta HOM05D007092 ORTHO05D008947 3.9e-33 144.4 82 69.5
Sed0004999 Sechium edule HOM05D007092 ORTHO05D008947 3.9e-33 144.4 81 72.8
Carub.0002s1986 Capsella rubella HOM05D007092 ORTHO05D008947 5.2e-33 144.1 82 68.3
Oeu049655.1 Olea europaea HOM05D007092 ORTHO05D008947 5.2e-33 144.1 79 74.7
AUR62025584 Chenopodium quinoa HOM05D007092 ORTHO05D008947 6.7e-33 143.7 81 70.4
MELO3C024294.2 Cucumis melo HOM05D007092 ORTHO05D008947 6.7e-33 143.7 81 70.4
Potri.010G250100 Populus trichocarpa HOM05D007092 ORTHO05D008947 6.7e-33 143.7 81 74.1
Sabra10G0194500 Salix brachista HOM05D007092 ORTHO05D008947 6.7e-33 143.7 81 72.8
Actinidia21869 Actinidia chinensis HOM05D007092 ORTHO05D008947 1.1e-32 142.9 81 71.6
AUR62001368 Chenopodium quinoa HOM05D007092 ORTHO05D008947 1.1e-32 142.9 81 69.1
Cc04_g00380 Coffea canephora HOM05D007092 ORTHO05D008947 1.1e-32 142.9 80 72.5
Lsat_1_v5_gn_5_137421 Lactuca sativa HOM05D007092 ORTHO05D008947 1.1e-32 142.9 81 71.6
Solyc06g063230.3 Solanum lycopersicum HOM05D007092 ORTHO05D008947 1.5e-32 142.5 83 69.9
Sopen06g022680 Solanum pennellii HOM05D007092 ORTHO05D008947 1.5e-32 142.5 83 69.9
C02p30520 Brassica napus HOM05D007092 ORTHO05D008947 2.0e-32 142.1 81 69.1
PGSC0003DMG400026517 Solanum tuberosum HOM05D007092 ORTHO05D008947 2.0e-32 142.1 83 69.9
BolC2t09103H Brassica oleracea HOM05D007092 ORTHO05D008947 3.3e-32 141.4 85 65.9
Lj6C21G9 Lonicera japonica HOM05D007092 ORTHO05D008947 4.4e-32 141.0 82 68.3
A02p18440 Brassica napus HOM05D007092 ORTHO05D008947 5.7e-32 140.6 79 69.6
BraA02t06883Z Brassica rapa HOM05D007092 ORTHO05D008947 5.7e-32 140.6 79 69.6
ECA234G1665 Erigeron canadensis HOM05D007092 ORTHO05D008947 5.7e-32 140.6 81 70.4
Thhalv10018923m.g Eutrema salsugineum HOM05D007092 ORTHO05D008947 5.7e-32 140.6 81 67.9
Nn2g12583 Nelumbo nucifera HOM05D007092 ORTHO05D008947 5.7e-32 140.6 79 73.4
ATR0580G293 Amborella trichopoda HOM05D007092 ORTHO05D008947 9.7e-32 139.8 81 67.9
C02p30540 Brassica napus HOM05D007092 ORTHO05D008947 1.3e-31 139.4 79 69.6
Peaxi162Scf00207g01537 Petunia axillaris HOM05D007092 ORTHO05D008947 4.8e-31 137.5 81 66.7
Hund18613 Selenicereus undatus HOM05D007092 ORTHO05D008947 6.3e-31 137.1 78 71.8
Sp5g28050 Schrenkiella parvula HOM05D007092 ORTHO05D008947 8.2e-31 136.7 82 67.1
Aqoxy7G03199 Aquilegia oxysepala HOM05D007092 ORTHO05D008947 1.8e-30 135.6 83 65.1
unitig_748.g7475 Utricularia gibba HOM05D007092 ORTHO05D008947 3.5e-29 131.3 79 67.1
THA.LOC104823333 Tarenaya hassleriana HOM05D007092 ORTHO05D008947 4.5e-29 131.0 82 67.1
HPP92_017449 Vanilla planifolia HOM05D007092 ORTHO05D008947 2.9e-28 128.3 87 64.4
TAR383G0306 Trochodendron aralioides HOM05D007092 ORTHO05D008947 3.6e-26 121.3 66 71.2
arahy.Tifrunner.gnm1.ann1.BLVE7G Arachis hypogaea HOM05D007092 ORTHO05D008947 8.0e-26 120.2 53 100.0
arahy.Tifrunner.gnm1.ann1.LQFB73 Arachis hypogaea HOM05D007092 ORTHO05D008947 8.0e-26 120.2 53 100.0
CDE07G2035 Ceratophyllum demersum HOM05D007092 ORTHO05D008947 4.0e-25 117.9 73 65.8
COL.COLO4_22872 Corchorus olitorius HOM05D007092 ORTHO05D008947 1.1e-22 109.8 66 69.7
Lj6A3T47 Lonicera japonica HOM05D007092 ORTHO05D008947 7.0e-22 107.1 60 70.0
Lj6C3G1 Lonicera japonica HOM05D000076 ORTHO05D001279 3.2e-19 98.2 51 74.5
SEGI_20536 Sequoiadendron giganteum HOM05D007092 ORTHO05D008947 7.2e-19 97.1 66 59.1
Mapoly0073s0046 Marchantia polymorpha HOM05D007092 ORTHO05D008947 9.4e-19 96.7 82 48.8
AagrBONN_evm.TU.Sc2ySwM_344.2112 Anthoceros agrestis HOM05D007092 ORTHO05D008947 3.7e-15 84.7 81 44.4
BcaC07g40307 Brassica carinata HOM05D007092 ORTHO05D008947 4.1e-14 81.3 59 54.2
Pp3c13_10570 Physcomitrium patens HOM05D007092 ORTHO05D008947 2.3e-12 75.5 89 37.1
arahy.Tifrunner.gnm1.ann1.AT2CXE Arachis hypogaea HOM05D007092 ORTHO05D008947 2.3e-09 65.5 30 93.3
arahy.Tifrunner.gnm1.ann1.KBSP04 Arachis hypogaea HOM05D002221 ORTHO05D002626 3.0e-09 65.1 33 84.8
arahy.Tifrunner.gnm1.ann1.R6H1XR Arachis hypogaea HOM05D002221 ORTHO05D002626 3.0e-09 65.1 33 84.8
SGA_v2.0_scaffold122G33289 Striga asiatica HOM05D002895 ORTHO05D003286 2.0e-08 62.4 36 72.2
SMO230G0107 Selaginella moellendorffii HOM05D007092 ORTHO05D008947 1.7e-07 59.3 78 35.9
SMO336G0036 Selaginella moellendorffii HOM05D007092 ORTHO05D008947 1.7e-07 59.3 78 35.9
Cpa.g.sc3948.1 Carica papaya HOM05D007092 ORTHO05D008947 2.2e-07 58.9 30 76.7
BcaB05g22026 Brassica carinata HOM05D007092 ORTHO05D008947 4.1e-06 54.7 40 50.0


User provided reference genes

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