Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.DD5A1S Arachis hypogaea HOM05D006626 ORTHO05D007352 3.4e-175 618.2 309 100.0
arahy.Tifrunner.gnm1.ann1.BMK4YH Arachis hypogaea HOM05D006626 ORTHO05D007352 1.4e-173 612.8 309 99.0
Ca_11335_v3 Cicer arietinum L. HOM05D006626 ORTHO05D007352 6.0e-108 394.8 307 70.4
Lalb_Chr19g0125411 Lupinus albus HOM05D006626 ORTHO05D007352 6.7e-107 391.3 308 70.8
Phvul.008G100000 Phaseolus vulgaris HOM05D006626 ORTHO05D007352 5.6e-106 388.3 312 67.3
Medtr7g060340 Medicago truncatula HOM05D006626 ORTHO05D007352 2.8e-105 386.0 319 65.8
Glyma.08G358600 Glycine max HOM05D006626 ORTHO05D007352 8.1e-105 384.4 310 66.5
Lj1g0010963 Lotus japonicus HOM05D006626 ORTHO05D007352 1.3e-102 377.1 338 62.7
VMungo1383G0921 Vigna mungo HOM05D006626 ORTHO05D007352 3.4e-95 352.4 295 66.1
CiPaw.09G191700 Carya illinoinensis HOM05D006626 ORTHO05D007352 6.1e-92 341.7 316 62.7
QL07p048128 Quercus lobata HOM05D006626 ORTHO05D007352 1.0e-91 340.9 306 61.1
MD12G1140400 Malus domestica HOM05D006626 ORTHO05D007352 4.8e-89 332.0 325 59.4
TAR623G1666 Trochodendron aralioides HOM05D006626 ORTHO05D007352 3.1e-88 329.3 309 60.2
PGR004G1893 Punica granatum HOM05D006626 ORTHO05D007352 6.9e-88 328.2 313 58.8
CANSAT35G0626 Cannabis sativa HOM05D006626 ORTHO05D007352 1.2e-87 327.4 305 60.3
COL.COLO4_14816 Corchorus olitorius HOM05D006626 ORTHO05D007352 2.6e-87 326.2 314 60.5
MD04G1127200 Malus domestica HOM05D006626 ORTHO05D007352 4.5e-87 325.5 328 59.1
GSVIVG01034185001 Vitis vinifera HOM05D006626 ORTHO05D007352 1.7e-86 323.6 306 60.5
CSS0017232 Camellia sinensis var. sinensis HOM05D006626 ORTHO05D007352 3.8e-86 322.4 327 57.5
RcHm_v2.0_Chr3g0466791 Rosa chinensis HOM05D006626 ORTHO05D007352 5.0e-86 322.0 312 58.7
Thecc.05G040800 Theobroma cacao HOM05D006626 ORTHO05D007352 8.5e-86 321.2 315 60.0
TWI74G0730 Tripterygium wilfordii HOM05D006626 ORTHO05D007352 1.1e-85 320.9 298 61.1
Gohir.A09G156700 Gossypium hirsutum HOM05D006626 ORTHO05D007352 1.4e-85 320.5 317 60.3
Nn2g10382 Nelumbo nucifera HOM05D006626 ORTHO05D007352 4.2e-85 318.9 312 59.3
Duzib093G0902 Durio zibethinus HOM05D006626 ORTHO05D007352 7.2e-85 318.2 318 59.1
FvH4_6g13970 Fragaria vesca HOM05D006626 ORTHO05D007352 9.4e-85 317.8 309 57.6
Gohir.D09G152000 Gossypium hirsutum HOM05D006626 ORTHO05D007352 1.2e-84 317.4 312 60.9
Atru.chr8.1962 Acer truncatum HOM05D006626 ORTHO05D007352 1.6e-84 317.0 315 58.1
Lj2A96T66 Lonicera japonica HOM05D006626 ORTHO05D007352 1.6e-84 317.0 307 58.3
Ciclev10012389m.g Citrus clementina HOM05D006626 ORTHO05D007352 2.1e-84 316.6 321 57.9
FAN14G0594 Fragaria x ananassa HOM05D006626 ORTHO05D007352 7.9e-84 314.7 309 57.3
Manes.09G089800 Manihot esculenta HOM05D006626 ORTHO05D007352 1.0e-83 314.3 300 60.3
Gorai.006G173400 Gossypium raimondii HOM05D006626 ORTHO05D007352 1.8e-83 313.5 316 58.2
FAN02G1739 Fragaria x ananassa HOM05D006626 ORTHO05D007352 2.3e-83 313.2 309 57.0
FAN05G2294 Fragaria x ananassa HOM05D006626 ORTHO05D007352 1.5e-82 310.5 301 58.1
FAN09G4835 Fragaria x ananassa HOM05D006626 ORTHO05D007352 1.5e-82 310.5 301 58.1
Sed0005156 Sechium edule HOM05D006626 ORTHO05D007352 3.7e-81 305.8 299 60.9
CsaV3_3G034930 Cucumis sativus L. HOM05D006626 ORTHO05D007352 4.8e-81 305.4 300 60.7
vmacro20144 Vaccinium macrocarpon HOM05D006626 ORTHO05D007352 6.3e-81 305.1 318 57.9
MELO3C009261.2 Cucumis melo HOM05D006626 ORTHO05D007352 8.2e-81 304.7 301 60.1
PSO339G0986 Papaver somniferum HOM05D006626 ORTHO05D007352 2.0e-79 300.1 333 55.3
THA.LOC104816277 Tarenaya hassleriana HOM05D006626 ORTHO05D007352 4.5e-79 298.9 318 55.3
Cc06_g02710 Coffea canephora HOM05D006626 ORTHO05D007352 1.9e-77 293.5 302 57.0
PSO384G0023 Papaver somniferum HOM05D006626 ORTHO05D007352 2.5e-77 293.1 327 54.4
Actinidia26461 Actinidia chinensis HOM05D006626 ORTHO05D007352 5.5e-77 292.0 307 57.3
Carub.0003s0853 Capsella rubella HOM05D006626 ORTHO05D007352 4.7e-76 288.9 302 55.6
FAN09G0676 Fragaria x ananassa HOM05D004773 ORTHO05D005943 4.7e-76 288.9 293 57.0
PGSC0003DMG400008843 Solanum tuberosum HOM05D006626 ORTHO05D007352 4.7e-76 288.9 306 53.9
AL3G20610 Arabidopsis lyrata HOM05D006626 ORTHO05D007352 6.7e-75 285.0 303 55.4
AT3G09430 Arabidopsis thaliana HOM05D006626 ORTHO05D007352 6.7e-75 285.0 299 56.5
Solyc09g010710.4 Solanum lycopersicum HOM05D006626 ORTHO05D007352 6.7e-75 285.0 306 53.3
Sopen09g005420 Solanum pennellii HOM05D006626 ORTHO05D007352 6.7e-75 285.0 306 53.3
A05p39550 Brassica napus HOM05D006626 ORTHO05D007352 1.5e-74 283.9 352 50.0
Sabra06G0064100 Salix brachista HOM05D006626 ORTHO05D007352 1.5e-74 283.9 301 56.5
Aa31LG3G1920 Aethionema arabicum HOM05D006626 ORTHO05D007352 5.7e-74 282.0 309 55.0
CARHR083840 Cardamine hirsuta HOM05D006626 ORTHO05D007352 5.7e-74 282.0 310 54.5
Rhsim05G0191600 Rhododendron simsii HOM05D006626 ORTHO05D007352 7.4e-74 281.6 305 55.4
Sp3g07800 Schrenkiella parvula HOM05D006626 ORTHO05D007352 9.7e-74 281.2 306 54.9
Aqoxy4G02911 Aquilegia oxysepala HOM05D006626 ORTHO05D007352 1.3e-73 280.8 313 52.7
HanXRQChr04g0124851 Helianthus annuus HOM05D006626 ORTHO05D007352 1.3e-73 280.8 309 55.0
BraA05t22736Z Brassica rapa HOM05D006626 ORTHO05D007352 2.8e-73 279.6 305 54.8
Thhalv10021243m.g Eutrema salsugineum HOM05D006626 ORTHO05D007352 4.8e-73 278.9 306 54.2
Aa31sc277G10 Aethionema arabicum HOM05D006626 ORTHO05D007352 8.2e-73 278.1 312 54.2
SGA_v2.0_scaffold126G33791 Striga asiatica HOM05D006626 ORTHO05D007352 1.4e-72 277.3 303 55.8
ECA236G0397 Erigeron canadensis HOM05D006626 ORTHO05D007352 1.8e-72 276.9 308 51.9
Migut.J00335 Erythranthe guttata HOM05D006626 ORTHO05D007352 2.4e-72 276.6 305 52.8
BcaC05g29673 Brassica carinata HOM05D006626 ORTHO05D007352 5.9e-71 271.9 371 47.2
BolC5t34508H Brassica oleracea HOM05D006626 ORTHO05D007352 1.0e-70 271.2 353 47.9
Sc20g0004680 Simmondsia chinensis HOM05D006626 ORTHO05D007352 1.3e-70 270.8 315 51.4
MSTRG.19088 Avicennia marina HOM05D006626 ORTHO05D007352 3.2e-69 266.2 314 51.3
SHI12668 Sapria himalayana HOM05D006626 ORTHO05D007352 3.6e-68 262.7 294 54.4
ATR0559G191 Amborella trichopoda HOM05D006626 ORTHO05D007352 4.7e-68 262.3 310 50.6
Nitab4.5_0003552g0020 Nicotiana tabacum HOM05D006626 ORTHO05D007352 4.7e-68 262.3 302 50.3
CDE09G1242 Ceratophyllum demersum HOM05D006626 ORTHO05D007352 6.1e-68 261.9 293 52.6
Nitab4.5_0005449g0010 Nicotiana tabacum HOM05D006626 ORTHO05D007352 6.1e-68 261.9 310 52.3
C05p58580 Brassica napus HOM05D006626 ORTHO05D007352 1.8e-67 260.4 401 42.9
MBI14_g37824_MAGBIO Magnolia biondii HOM05D006626 ORTHO05D007352 8.8e-67 258.1 298 55.4
Peaxi162Scf00710g00212 Petunia axillaris HOM05D006626 ORTHO05D007352 1.5e-66 257.3 306 50.7
Peaxi162Scf00165g01519 Petunia axillaris HOM05D006626 ORTHO05D007352 5.7e-66 255.4 314 51.6
Potri.006G084500 Populus trichocarpa HOM05D006626 ORTHO05D007352 5.7e-66 255.4 303 52.5
Oeu049236.1 Olea europaea HOM05D006626 ORTHO05D007352 9.7e-66 254.6 296 53.4
Ah.08g212230 Amaranthus hybridus HOM05D006626 ORTHO05D007352 3.7e-65 252.7 320 48.4
CAN.G326.19 Capsicum annuum HOM05D006626 ORTHO05D007352 6.3e-65 251.9 272 53.7
Nitab4.5_0005575g0040 Nicotiana tabacum HOM05D006626 ORTHO05D007352 1.6e-60 237.3 327 48.3
Lsat_1_v5_gn_8_82780 Lactuca sativa HOM05D006626 ORTHO05D007352 2.0e-58 230.3 335 46.9
ClCG10G021100 Citrullus lanatus HOM05D006626 ORTHO05D007352 9.8e-58 228.0 300 52.0
Eucgr.K03142 Eucalyptus grandis HOM05D006626 ORTHO05D007352 4.1e-56 222.6 165 67.3
Prupe.6G253700 Prunus persica HOM05D006626 ORTHO05D007352 1.6e-55 220.7 258 52.3
EL10Ac7g17297 Beta vulgaris HOM05D006626 ORTHO05D007352 1.9e-53 213.8 296 45.3
arahy.Tifrunner.gnm1.ann1.9RDP1W Arachis hypogaea HOM05D003961 ORTHO05D007352 2.7e-52 209.9 113 92.0
Zm00001eb105220 Zea mays HOM05D006626 ORTHO05D007352 2.7e-52 209.9 296 44.6
arahy.Tifrunner.gnm1.ann1.MM579M Arachis hypogaea HOM05D001890 ORTHO05D003442 1.0e-51 208.0 114 90.4
AUR62040984 Chenopodium quinoa HOM05D006626 ORTHO05D007352 2.6e-50 203.4 109 84.4
Os07g0695700 Oryza sativa ssp. japonica HOM05D006626 ORTHO05D007352 5.4e-48 195.7 287 43.2
DCAR_014846 Daucus carota HOM05D006626 ORTHO05D007352 7.7e-47 191.8 109 82.6
HPP92_012592 Vanilla planifolia HOM05D006626 ORTHO05D007352 1.0e-46 191.4 109 81.7
Mapoly0001s0170 Marchantia polymorpha HOM05D006626 ORTHO05D007352 3.8e-46 189.5 137 66.4
Psat3g141480 Pisum sativum HOM05D006626 ORTHO05D007352 4.3e-45 186.0 222 53.6
AUR62042106 Chenopodium quinoa HOM05D006626 ORTHO05D007352 8.9e-43 178.3 98 83.7
AagrBONN_evm.TU.Sc2ySwM_362.1793 Anthoceros agrestis HOM05D006626 ORTHO05D007352 1.4e-40 171.0 141 58.2
QL93p0107_0195 Quercus lobata HOM05D006626 ORTHO05D007352 5.4e-40 169.1 139 64.7
Nitab4.5_0000761g0070 Nicotiana tabacum HOM05D006626 ORTHO05D007352 2.7e-39 166.8 98 81.6
QL01p055053 Quercus lobata HOM05D006626 ORTHO05D007352 7.8e-39 165.2 98 79.6
Hund12078 Selenicereus undatus HOM05D006626 ORTHO05D007352 3.9e-38 162.9 88 84.1
CBR_g84850 Chara braunii HOM05D006626 ORTHO05D007352 8.6e-38 161.8 124 60.5
Atru.chr11.672 Acer truncatum HOM05D006626 ORTHO05D007352 1.8e-35 154.1 98 75.5
Haze_20773 Corylus avellana HOM05D003752 ORTHO05D004537 1.8e-35 154.1 243 42.8
Dinv35614 Davidia involucrata HOM05D006626 ORTHO05D007352 5.8e-34 149.1 224 45.1
SEGI_14743 Sequoiadendron giganteum HOM05D006626 ORTHO05D007352 9.8e-34 148.3 98 71.4
Cpa.g.sc188.15 Carica papaya HOM05D006626 ORTHO05D007352 2.0e-31 140.6 229 46.7
AL614U10010 Arabidopsis lyrata HOM05D006626 ORTHO05D007352 5.8e-26 122.5 212 43.4
MD02G1131100 Malus domestica HOM05D006626 ORTHO05D007352 2.1e-15 87.4 111 45.9
MD05G1218700 Malus domestica HOM05D006626 ORTHO05D007352 2.1e-15 87.4 111 45.9
MD16G1182100 Malus domestica HOM05D006626 ORTHO05D007352 2.1e-15 87.4 111 45.9
MD15G1437500 Malus domestica HOM05D006626 ORTHO05D007352 2.7e-15 87.0 111 45.9
Aa31sc161G10 Aethionema arabicum HOM05D006626 ORTHO05D007352 1.5e-13 81.3 231 34.2
Nitab4.5_0027058g0010 Nicotiana tabacum HOM05D006626 ORTHO05D007352 2.1e-12 77.4 207 35.3
AUR62042107 Chenopodium quinoa HOM05D006626 ORTHO05D007352 1.4e-11 74.7 200 32.0
SGA_v2.0_scaffold18G08259 Striga asiatica HOM05D006626 ORTHO05D007352 3.1e-11 73.6 42 76.2
QL01p053860 Quercus lobata HOM05D006626 ORTHO05D007352 4.0e-11 73.2 41 80.5
AUR62040983 Chenopodium quinoa HOM05D006626 ORTHO05D007352 4.9e-09 66.2 205 30.7
TAR633G2221 Trochodendron aralioides HOM05D006626 ORTHO05D007352 6.4e-09 65.9 44 65.9
CDE02G2228 Ceratophyllum demersum HOM05D006626 ORTHO05D007352 9.3e-08 62.0 121 38.8


User provided reference genes

Program Settings