Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.DBZ4H1 Arachis hypogaea HOM05D005956 ORTHO05D007197 1.6e-54 216.1 127 100.0
arahy.Tifrunner.gnm1.ann1.03KM4I Arachis hypogaea HOM05D005956 ORTHO05D007197 9.9e-33 143.7 94 81.9
arahy.Tifrunner.gnm1.ann1.XHCR8J Arachis hypogaea HOM05D005956 ORTHO05D007197 4.9e-32 141.4 94 80.9
arahy.Tifrunner.gnm1.ann1.12WCBU Arachis hypogaea HOM05D005956 ORTHO05D007197 6.4e-32 141.0 94 79.8
arahy.Tifrunner.gnm1.ann1.X8CU4B Arachis hypogaea HOM05D005956 ORTHO05D007197 1.3e-27 126.7 93 74.2
VMungo1080G0145 Vigna mungo HOM05D005956 ORTHO05D007197 2.3e-21 105.9 93 63.4
Phvul.005G185600 Phaseolus vulgaris HOM05D005956 ORTHO05D007197 2.5e-20 102.4 93 60.2
Duzib192G0068 Durio zibethinus HOM05D005956 ORTHO05D007197 5.7e-20 101.3 106 54.7
Sabra07G0001300 Salix brachista HOM05D005956 ORTHO05D007197 5.7e-20 101.3 93 55.9
TAR636G0827 Trochodendron aralioides HOM05D005956 ORTHO05D007197 1.3e-19 100.1 93 58.1
arahy.Tifrunner.gnm1.ann1.ZI8HJG Arachis hypogaea HOM05D005956 ORTHO05D007197 2.8e-19 99.0 63 81.0
CiPaw.01G207000 Carya illinoinensis HOM05D005956 ORTHO05D007197 6.3e-19 97.8 92 57.6
RcHm_v2.0_Chr2g0149071 Rosa chinensis HOM05D005956 ORTHO05D007197 8.2e-19 97.4 93 53.8
FvH4_6g36600 Fragaria vesca HOM05D005956 ORTHO05D007197 1.1e-18 97.1 93 53.8
PSO063G0021 Papaver somniferum HOM05D005956 ORTHO05D007197 1.1e-18 97.1 93 55.9
Actinidia24382 Actinidia chinensis HOM05D005956 ORTHO05D007197 1.4e-18 96.7 93 57.0
CSS0010876 Camellia sinensis var. sinensis HOM05D005956 ORTHO05D007197 1.8e-18 96.3 93 57.0
PSO170G2336 Papaver somniferum HOM05D005956 ORTHO05D007197 1.8e-18 96.3 93 54.8
Migut.D02038 Erythranthe guttata HOM05D005956 ORTHO05D007197 3.1e-18 95.5 93 57.0
Actinidia21896 Actinidia chinensis HOM05D005956 ORTHO05D007197 4.1e-18 95.1 93 54.8
Nn2g12784 Nelumbo nucifera HOM05D005956 ORTHO05D007197 1.5e-17 93.2 87 57.5
arahy.Tifrunner.gnm1.ann1.85VD00 Arachis hypogaea HOM05D005956 ORTHO05D007197 2.6e-17 92.4 69 78.3
vmacro18734 Vaccinium macrocarpon HOM05D005956 ORTHO05D007197 2.6e-17 92.4 93 52.7
Rhsim08G0251500 Rhododendron simsii HOM05D005956 ORTHO05D007197 3.4e-17 92.0 93 53.8
Thecc.06G054100 Theobroma cacao HOM05D005956 ORTHO05D007197 3.4e-17 92.0 93 54.8
Atru.chr1.2600 Acer truncatum HOM05D005956 ORTHO05D007197 4.5e-17 91.7 93 53.8
GSVIVG01029533001 Vitis vinifera HOM05D005956 ORTHO05D007197 5.9e-17 91.3 93 52.7
Dinv08767 Davidia involucrata HOM05D005956 ORTHO05D007197 7.6e-17 90.9 90 55.6
Manes.14G006900 Manihot esculenta HOM05D005956 ORTHO05D007197 1.0e-16 90.5 93 55.9
arahy.Tifrunner.gnm1.ann1.X81K0T Arachis hypogaea HOM05D005956 ORTHO05D007197 1.3e-16 90.1 58 77.6
Cfa003426 Carpinus fangiana HOM05D005956 ORTHO05D007197 2.2e-16 89.4 87 55.2
FvH4_4g20560 Fragaria vesca HOM05D005956 ORTHO05D007197 2.9e-16 89.0 82 56.1
MD17G1161200 Malus domestica HOM05D005956 ORTHO05D007197 2.9e-16 89.0 93 49.5
PGR083G0114 Punica granatum HOM05D005956 ORTHO05D007197 2.9e-16 89.0 93 53.8
Haze_16217 Corylus avellana HOM05D005956 ORTHO05D007197 5.0e-16 88.2 100 49.0
Eucgr.J03191 Eucalyptus grandis HOM05D005956 ORTHO05D007197 8.5e-16 87.4 82 56.1
TWI12G1352 Tripterygium wilfordii HOM05D005956 ORTHO05D007197 1.1e-15 87.0 93 52.7
Glyma.06G230200 Glycine max HOM05D005956 ORTHO05D007197 1.2e-14 83.6 69 66.7
Cpa.g.sc176.24 Carica papaya HOM05D005956 ORTHO05D007197 1.6e-14 83.2 93 48.4
Psat0s410g0120 Pisum sativum HOM05D005956 ORTHO05D007197 2.7e-14 82.4 72 62.5
SGA_v2.0_scaffold7G04178 Striga asiatica HOM05D006000 ORTHO05D007749 3.6e-14 82.0 93 49.5
Potri.007G001800 Populus trichocarpa HOM05D005956 ORTHO05D007197 4.6e-14 81.6 93 48.4
AUR62000122 Chenopodium quinoa HOM05D005956 ORTHO05D007197 1.0e-13 80.5 92 47.8
Lj7A719T46 Lonicera japonica HOM05D005956 ORTHO05D007197 1.8e-13 79.7 79 54.4
MBI16_g00686_MAGBIO Magnolia biondii HOM05D005956 ORTHO05D007197 2.3e-13 79.3 93 49.5
SGA_v2.0_scaffold115G32115 Striga asiatica HOM05D005956 ORTHO05D007197 2.3e-13 79.3 93 47.3
AUR62019303 Chenopodium quinoa HOM05D005956 ORTHO05D007197 3.0e-13 79.0 86 47.7
HanXRQChr15g0497231 Helianthus annuus HOM05D005956 ORTHO05D007197 3.9e-13 78.6 93 45.2
Sc05g0006980 Simmondsia chinensis HOM05D005956 ORTHO05D007197 3.9e-13 78.6 93 49.5
Oeu039938.1 Olea europaea HOM05D005956 ORTHO05D007197 5.1e-13 78.2 93 47.3
SalBow8G3086 Salvia bowleyana HOM05D005956 ORTHO05D007197 8.8e-13 77.4 78 53.8
Gohir.A06G112700 Gossypium hirsutum HOM05D005956 ORTHO05D007197 2.5e-12 75.9 69 58.0
HPP92_000245 Vanilla planifolia HOM05D005956 ORTHO05D007197 3.3e-12 75.5 93 48.4
Nitab4.5_0000499g0110 Nicotiana tabacum HOM05D005956 ORTHO05D007197 4.3e-12 75.1 93 48.4
Aa31LG4G2050 Aethionema arabicum HOM05D005956 ORTHO05D007197 5.7e-12 74.7 93 46.2
Ah.05g168390 Amaranthus hybridus HOM05D005956 ORTHO05D007197 7.4e-12 74.3 82 48.8
MELO3C020528.2 Cucumis melo HOM05D005956 ORTHO05D007197 9.7e-12 73.9 87 48.3
unitig_578.g15928 Utricularia gibba HOM05D005956 ORTHO05D007197 9.7e-12 73.9 82 47.6
Atru.chr1.2601 Acer truncatum HOM05D005956 ORTHO05D007197 1.7e-11 73.2 85 48.2
SGA_v2.0_scaffold69G23343 Striga asiatica HOM05D005956 ORTHO05D007197 1.7e-11 73.2 93 47.3
BraA07t31918Z Brassica rapa HOM05D000309 ORTHO05D007197 3.7e-11 72.0 93 44.1
ClCG03G000530 Citrullus lanatus HOM05D005956 ORTHO05D007197 1.1e-10 70.5 86 45.3
Gohir.D06G117400 Gossypium hirsutum HOM05D005956 ORTHO05D007197 1.4e-10 70.1 93 44.1
Gorai.010G135000 Gossypium raimondii HOM05D005956 ORTHO05D007197 1.4e-10 70.1 93 44.1
FAN09G1770 Fragaria x ananassa HOM05D005956 ORTHO05D007197 1.8e-10 69.7 92 40.2
FAN14G1696 Fragaria x ananassa HOM05D005956 ORTHO05D007197 2.4e-10 69.3 92 40.2
FAN02G1317 Fragaria x ananassa HOM05D005956 ORTHO05D007197 4.1e-10 68.6 92 40.2
A07p44100 Brassica napus HOM05D000309 ORTHO05D007197 1.2e-09 67.0 79 45.6
C06p52830 Brassica napus HOM05D000309 ORTHO05D007197 2.0e-09 66.2 79 45.6
THA.LOC104812335 Tarenaya hassleriana HOM05D005956 ORTHO05D007197 2.0e-09 66.2 80 47.5
Hma1.2p1_1111F.1_g258470 Hydrangea macrophylla HOM05D005956 ORTHO05D007197 2.6e-09 65.9 73 52.1
CAN.G790.4 Capsicum annuum HOM05D005956 ORTHO05D007197 3.4e-09 65.5 93 44.1
LjContig00482g0022414 Lotus japonicus HOM05D005956 ORTHO05D007197 5.9e-09 64.7 93 44.1
Sp5g33970 Schrenkiella parvula HOM05D005956 ORTHO05D007197 7.7e-09 64.3 79 45.6
BcaB03g16055 Brassica carinata HOM05D005956 ORTHO05D007197 1.0e-08 63.9 79 44.3
EL10Ac7g17213 Beta vulgaris HOM05D005956 ORTHO05D007197 1.7e-08 63.2 63 55.6
Prupe.3G025200 Prunus persica HOM05D005956 ORTHO05D007197 1.7e-08 63.2 59 52.5
QL07p046118 Quercus lobata HOM05D005956 ORTHO05D007197 1.7e-08 63.2 87 44.8
BcaC08g47440 Brassica carinata HOM05D005956 ORTHO05D007197 2.2e-08 62.8 78 44.9
BolC6t40300H Brassica oleracea HOM05D000163 ORTHO05D000219 2.2e-08 62.8 78 44.9
MD09G1167200 Malus domestica HOM05D005956 ORTHO05D007197 2.9e-08 62.4 92 35.9
CDE02G2643 Ceratophyllum demersum HOM05D005956 ORTHO05D007197 3.8e-08 62.0 57 47.4
Ciclev10013933m.g Citrus clementina HOM05D005956 ORTHO05D007197 3.8e-08 62.0 52 59.6
MBI16_g37212_MAGBIO Magnolia biondii HOM05D005956 ORTHO05D007197 3.8e-08 62.0 78 46.2
CANSAT01G3224 Cannabis sativa HOM05D005956 ORTHO05D007197 1.4e-07 60.1 93 37.6
SGA_v2.0_scaffold1097G53840 Striga asiatica HOM05D005956 ORTHO05D007197 9.4e-07 57.4 63 46.0
Solyc03g124040.3 Solanum lycopersicum HOM05D005956 ORTHO05D007197 1.2e-06 57.0 67 47.8
Cc07_g21430 Coffea canephora HOM05D005956 ORTHO05D007197 2.7e-06 55.8 57 50.9
ATR0626G219 Amborella trichopoda HOM05D005956 ORTHO05D007197 4.7e-06 55.1 93 36.6
Sopen03g041770 Solanum pennellii HOM05D005956 ORTHO05D007197 6.1e-06 54.7 93 39.8


User provided reference genes

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