Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.DB9VBU Arachis hypogaea HOM05D002402 ORTHO05D002633 1.4e-72 276.2 138 100.0
arahy.Tifrunner.gnm1.ann1.J37LAC Arachis hypogaea HOM05D002402 ORTHO05D002633 1.0e-22 110.5 106 62.3
arahy.Tifrunner.gnm1.ann1.F42R6R Arachis hypogaea HOM05D002402 ORTHO05D002633 6.8e-19 97.8 151 41.1
VMungo1383G1973 Vigna mungo HOM05D002402 ORTHO05D002633 9.2e-16 87.4 106 47.2
Glyma.03G144100 Glycine max HOM05D002402 ORTHO05D002633 3.0e-14 82.4 107 47.7
TPR.G18233 Trifolium pratense HOM05D002402 ORTHO05D002633 3.9e-14 82.0 106 43.4
Lj1g0025246 Lotus japonicus HOM05D002402 ORTHO05D002633 6.6e-14 81.3 107 44.9
Phvul.001G141800 Phaseolus vulgaris HOM05D002402 ORTHO05D002633 8.6e-14 80.9 106 43.4
Medtr7g093090 Medicago truncatula HOM05D002402 ORTHO05D002633 1.5e-13 80.1 106 41.5
Ca_08515_v3 Cicer arietinum L. HOM05D002402 ORTHO05D002633 1.9e-13 79.7 106 45.3
vmacro07914 Vaccinium macrocarpon HOM05D002402 ORTHO05D002633 1.1e-11 73.9 105 41.9
Rhsim03G0006500 Rhododendron simsii HOM05D002402 ORTHO05D002633 1.4e-11 73.6 105 41.0
CSS0020725 Camellia sinensis var. sinensis HOM05D002402 ORTHO05D002633 5.2e-11 71.6 105 43.8
Psat3g068840 Pisum sativum HOM05D002402 ORTHO05D002633 6.8e-11 71.2 108 38.9
Dinv14289 Davidia involucrata HOM05D002402 ORTHO05D002633 3.4e-10 68.9 105 41.0
Potri.016G046802 Populus trichocarpa HOM05D002402 ORTHO05D002633 3.4e-10 68.9 105 41.9
MBI01_g01349_MAGBIO Magnolia biondii HOM05D002402 ORTHO05D002633 5.8e-10 68.2 105 39.0
Peaxi162Scf00003g04331 Petunia axillaris HOM05D002402 ORTHO05D002633 5.8e-10 68.2 105 42.9
GSVIVG01033510001 Vitis vinifera HOM05D002402 ORTHO05D002633 1.7e-09 66.6 105 41.0
Sabra16G0050700 Salix brachista HOM05D002402 ORTHO05D002633 2.2e-09 66.2 105 40.0
Hma1.2p1_0386F.1_g141800 Hydrangea macrophylla HOM05D002402 ORTHO05D002633 8.3e-09 64.3 105 40.0
Nitab4.5_0001538g0050 Nicotiana tabacum HOM05D002402 ORTHO05D002633 1.1e-08 63.9 105 40.0
Nitab4.5_0000105g0050 Nicotiana tabacum HOM05D002402 ORTHO05D002633 1.9e-08 63.2 105 40.0
Actinidia22032 Actinidia chinensis HOM05D002402 ORTHO05D002633 3.2e-08 62.4 101 40.6
Haze_19978 Corylus avellana HOM05D002402 ORTHO05D002633 4.1e-08 62.0 105 39.0
Cfa020177 Carpinus fangiana HOM05D002402 ORTHO05D002633 9.2e-08 60.8 108 38.9
Hund19198 Selenicereus undatus HOM05D002402 ORTHO05D002633 9.2e-08 60.8 105 37.1
Nitab4.5_0000324g0110 Nicotiana tabacum HOM05D002402 ORTHO05D002633 1.2e-07 60.5 97 42.3
Nitab4.5_0002689g0030 Nicotiana tabacum HOM05D002402 ORTHO05D002633 1.2e-07 60.5 105 41.0
Peaxi162Scf00258g00424 Petunia axillaris HOM05D002402 ORTHO05D002633 1.2e-07 60.5 105 41.0
Atru.chr8.1093 Acer truncatum HOM05D002402 ORTHO05D002633 2.7e-07 59.3 105 39.0
AUR62012041 Chenopodium quinoa HOM05D002402 ORTHO05D002633 2.7e-07 59.3 106 35.8
QL07p023587 Quercus lobata HOM05D002402 ORTHO05D002633 2.7e-07 59.3 104 36.5
Sabra03G0158800 Salix brachista HOM05D002402 ORTHO05D002633 2.7e-07 59.3 105 36.2
Ah.13g075940 Amaranthus hybridus HOM05D002402 ORTHO05D002633 3.5e-07 58.9 105 36.2
AUR62015380 Chenopodium quinoa HOM05D002402 ORTHO05D002633 3.5e-07 58.9 106 35.8
Nn2g15656 Nelumbo nucifera HOM05D002402 ORTHO05D002633 3.5e-07 58.9 105 37.1
CAN.G1161.26 Capsicum annuum HOM05D002402 ORTHO05D002633 4.6e-07 58.5 105 39.0
Rhsim04G0097200 Rhododendron simsii HOM05D002402 ORTHO05D002633 4.6e-07 58.5 107 41.1
RhsimUnG0213000 Rhododendron simsii HOM05D002402 ORTHO05D002633 4.6e-07 58.5 107 41.1
Lsat_1_v5_gn_5_163100 Lactuca sativa HOM05D002402 ORTHO05D002633 6.0e-07 58.2 105 39.0
PGSC0003DMG400011413 Solanum tuberosum HOM05D002402 ORTHO05D002633 6.0e-07 58.2 105 38.1
vmacro09113 Vaccinium macrocarpon HOM05D002402 ORTHO05D002633 6.0e-07 58.2 106 37.7
arahy.Tifrunner.gnm1.ann1.023W1F Arachis hypogaea HOM05D002402 ORTHO05D002633 1.7e-06 56.6 33 84.8
ECA248G3508 Erigeron canadensis HOM05D002402 ORTHO05D002633 1.7e-06 56.6 105 39.0
EL10Ac3g06926 Beta vulgaris HOM05D002402 ORTHO05D002633 2.3e-06 56.2 106 34.0
Lj2A367T24 Lonicera japonica HOM05D002402 ORTHO05D002633 3.0e-06 55.8 104 36.5
Sabra03G0155600 Salix brachista HOM05D002402 ORTHO05D002633 3.9e-06 55.5 105 35.2
Migut.J01828 Erythranthe guttata HOM05D002402 ORTHO05D002633 5.1e-06 55.1 105 36.2
Lj1C439T2 Lonicera japonica HOM05D002402 ORTHO05D002633 5.1e-06 55.1 105 35.2
Sc19g0007000 Simmondsia chinensis HOM05D002402 ORTHO05D002633 5.1e-06 55.1 105 34.3
TAR623G1535 Trochodendron aralioides HOM05D002402 ORTHO05D002633 5.1e-06 55.1 105 37.1


User provided reference genes

Program Settings