Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.DAY3RM Arachis hypogaea HOM05D006672 ORTHO05D007769 3.9e-84 315.5 261 100.0
arahy.Tifrunner.gnm1.ann1.HW7XL7 Arachis hypogaea HOM05D006672 ORTHO05D007769 1.6e-48 197.2 130 78.5
arahy.Tifrunner.gnm1.ann1.C7681Z Arachis hypogaea HOM05D006672 ORTHO05D007769 3.8e-47 192.6 133 75.2
arahy.Tifrunner.gnm1.ann1.ZTP7X5 Arachis hypogaea HOM05D006672 ORTHO05D007769 8.8e-44 181.4 124 75.8
arahy.Tifrunner.gnm1.ann1.QF27IC Arachis hypogaea HOM05D006672 ORTHO05D007769 1.2e-43 181.0 134 71.6
arahy.Tifrunner.gnm1.ann1.N61AC9 Arachis hypogaea HOM05D006672 ORTHO05D007769 1.5e-43 180.6 132 74.2
arahy.Tifrunner.gnm1.ann1.07RGV5 Arachis hypogaea HOM05D006672 ORTHO05D007769 1.8e-41 173.7 130 81.5
arahy.Tifrunner.gnm1.ann1.XTGM9Z Arachis hypogaea HOM05D006672 ORTHO05D007769 4.1e-41 172.6 114 77.2
arahy.Tifrunner.gnm1.ann1.MVJ1PZ Arachis hypogaea HOM05D006672 ORTHO05D007769 1.6e-40 170.6 123 72.4
arahy.Tifrunner.gnm1.ann1.HQ5KA8 Arachis hypogaea HOM05D006672 ORTHO05D007769 2.2e-26 123.6 97 66.0
arahy.Tifrunner.gnm1.ann1.K72DJ3 Arachis hypogaea HOM05D006672 ORTHO05D007769 8.3e-26 121.7 96 67.7
Glyma.08G205200 Glycine max HOM05D006672 ORTHO05D007769 5.0e-23 112.5 133 50.4
Phvul.010G149100 Phaseolus vulgaris HOM05D006672 ORTHO05D007769 1.6e-21 107.5 135 49.6
CiPaw.02G149600 Carya illinoinensis HOM05D006672 ORTHO05D007769 4.0e-20 102.8 137 48.2
TWI75G0771 Tripterygium wilfordii HOM05D006672 ORTHO05D007769 8.9e-20 101.7 129 45.7
Lalb_Chr25g0279941 Lupinus albus HOM05D006672 ORTHO05D007769 9.8e-19 98.2 124 50.0
VMungo0331G0342 Vigna mungo HOM05D006672 ORTHO05D007769 8.3e-18 95.1 113 47.8
Cfa009362 Carpinus fangiana HOM05D006672 ORTHO05D007769 2.7e-16 90.1 130 47.7
Lj3g0012066 Lotus japonicus HOM05D006672 ORTHO05D007769 2.7e-16 90.1 132 47.0
TWI12G1441 Tripterygium wilfordii HOM05D006672 ORTHO05D007769 4.6e-16 89.4 125 44.0
Haze_12408 Corylus avellana HOM05D006672 ORTHO05D007769 1.0e-15 88.2 130 47.7
Manes.04G128475 Manihot esculenta HOM05D006672 ORTHO05D007769 3.9e-15 86.3 127 44.1
AUR62011637 Chenopodium quinoa HOM05D006672 ORTHO05D007769 6.6e-15 85.5 138 44.9
Ca_20375_v3 Cicer arietinum L. HOM05D006672 ORTHO05D007769 6.6e-15 85.5 124 43.5
Cc04_g03140 Coffea canephora HOM05D006672 ORTHO05D007769 1.1e-14 84.7 129 45.7
Dinv30493 Davidia involucrata HOM05D006672 ORTHO05D007769 1.1e-14 84.7 139 41.7
Potri.003G053500 Populus trichocarpa HOM05D006672 ORTHO05D007769 4.3e-14 82.8 126 42.9
Atru.chr1.3318 Acer truncatum HOM05D006672 ORTHO05D007769 5.6e-14 82.4 130 47.7
FvH4_6g31600 Fragaria vesca HOM05D006672 ORTHO05D007769 1.2e-13 81.3 127 44.9
FAN09G1670 Fragaria x ananassa HOM05D006672 ORTHO05D007769 2.1e-13 80.5 127 44.9
TPR.G17666 Trifolium pratense HOM05D006672 ORTHO05D007769 2.1e-13 80.5 92 54.3
Ah.01g021520 Amaranthus hybridus HOM05D006672 ORTHO05D007769 4.7e-13 79.3 138 39.1
RcHm_v2.0_Chr2g0138661 Rosa chinensis HOM05D006672 ORTHO05D007769 6.2e-13 79.0 132 43.9
Prupe.3G068600 Prunus persica HOM05D006672 ORTHO05D007769 1.1e-12 78.2 114 45.6
EL10Ac9g22019 Beta vulgaris HOM05D000202 ORTHO05D000117 4.0e-12 76.3 137 41.6
AUR62016468 Chenopodium quinoa HOM05D006672 ORTHO05D007769 6.8e-12 75.5 136 41.2
FAN05G5736 Fragaria x ananassa HOM05D006672 ORTHO05D007769 6.8e-12 75.5 128 45.3
Medtr0206s0010 Medicago truncatula HOM05D006672 ORTHO05D007769 1.5e-11 74.3 107 47.7
Medtr4g012950 Medicago truncatula HOM05D006672 ORTHO05D007769 1.5e-11 74.3 107 46.7
FAN14G5379 Fragaria x ananassa HOM05D006672 ORTHO05D007769 2.6e-11 73.6 125 43.2
Psat7g250280 Pisum sativum HOM05D006672 ORTHO05D007769 2.6e-11 73.6 92 48.9
Sabra03G0029900 Salix brachista HOM05D006672 ORTHO05D007769 2.6e-11 73.6 137 40.9
DCAR_026329 Daucus carota HOM05D006672 ORTHO05D007769 5.8e-11 72.4 117 42.7
DCAR_022631 Daucus carota HOM05D006672 ORTHO05D007769 7.6e-11 72.0 109 45.0
Ciclev10026595m.g Citrus clementina HOM05D006672 ORTHO05D007769 2.2e-10 70.5 109 45.0
Actinidia24746 Actinidia chinensis HOM05D006672 ORTHO05D007769 3.8e-10 69.7 136 38.2
Nitab4.5_0008314g0010 Nicotiana tabacum HOM05D006672 ORTHO05D007769 3.8e-10 69.7 130 42.3
Sc15g0001280 Simmondsia chinensis HOM05D006672 ORTHO05D007769 4.9e-10 69.3 128 39.8
Lsat_1_v5_gn_5_130661 Lactuca sativa HOM05D006672 ORTHO05D007769 6.4e-10 68.9 128 39.1
MD17G1192500 Malus domestica HOM05D006672 ORTHO05D007769 6.4e-10 68.9 105 41.9
CANSAT56G0062 Cannabis sativa HOM05D006672 ORTHO05D007769 8.4e-10 68.6 135 40.7
SalBow1G8254 Salvia bowleyana HOM05D000380 ORTHO05D000561 8.4e-10 68.6 135 41.5
Oeu040367.1 Olea europaea HOM05D006672 ORTHO05D007769 1.9e-09 67.4 116 42.2
Hma1.2p1_2022F.1_g311340 Hydrangea macrophylla HOM05D006672 ORTHO05D007769 3.2e-09 66.6 95 44.2
Lsat_1_v5_gn_5_130760 Lactuca sativa HOM05D006672 ORTHO05D007769 3.2e-09 66.6 128 38.3
QL05p022164 Quercus lobata HOM05D006672 ORTHO05D007769 4.1e-09 66.2 119 42.0
Rhsim12G0199700 Rhododendron simsii HOM05D006672 ORTHO05D007769 4.1e-09 66.2 109 44.0
TAR636G2852 Trochodendron aralioides HOM05D006672 ORTHO05D007769 5.4e-09 65.9 135 35.6
ClCG07G013120 Citrullus lanatus HOM05D006672 ORTHO05D007769 9.2e-09 65.1 136 36.8
MSTRG.22671 Avicennia marina HOM05D006672 ORTHO05D007769 1.2e-08 64.7 132 38.6
BcaC05g25462 Brassica carinata HOM05D006672 ORTHO05D007769 1.2e-08 64.7 115 40.9
Migut.D01021 Erythranthe guttata HOM05D006672 ORTHO05D007769 1.2e-08 64.7 135 40.0
MBI04_g22016_MAGBIO Magnolia biondii HOM05D006672 ORTHO05D007769 1.6e-08 64.3 141 39.0
Sp1g13550 Schrenkiella parvula HOM05D006672 ORTHO05D007769 2.1e-08 63.9 130 39.2
THA.LOC104800426 Tarenaya hassleriana HOM05D006672 ORTHO05D007769 2.1e-08 63.9 129 36.4
HanXRQChr10g0313401 Helianthus annuus HOM05D006672 ORTHO05D007769 2.7e-08 63.5 134 38.8
BcaC05g25464 Brassica carinata HOM05D006672 ORTHO05D007769 3.5e-08 63.2 130 36.9
ECA234G2073 Erigeron canadensis HOM05D006672 ORTHO05D007769 3.5e-08 63.2 135 40.0
Lsat_1_v5_gn_2_34400 Lactuca sativa HOM05D008424 ORTHO05D007769 3.5e-08 63.2 134 39.6
Gohir.D05G130600 Gossypium hirsutum HOM05D006672 ORTHO05D007769 4.6e-08 62.8 157 33.1
Gorai.009G134300 Gossypium raimondii HOM05D006672 ORTHO05D007769 4.6e-08 62.8 157 33.1
BcaC05g25452 Brassica carinata HOM05D006672 ORTHO05D007769 6.0e-08 62.4 124 39.5
C05p13360 Brassica napus HOM05D006672 ORTHO05D007769 6.0e-08 62.4 124 39.5
BolC5t30073H Brassica oleracea HOM05D006672 ORTHO05D007769 7.8e-08 62.0 126 38.9
COL.COLO4_30405 Corchorus olitorius HOM05D006672 ORTHO05D007769 7.8e-08 62.0 163 31.3
A06p11230 Brassica napus HOM05D006672 ORTHO05D007769 1.0e-07 61.6 121 39.7
BraA06t24303Z Brassica rapa HOM05D006672 ORTHO05D007769 1.0e-07 61.6 121 39.7
Nitab4.5_0001315g0240 Nicotiana tabacum HOM05D006672 ORTHO05D007769 1.0e-07 61.6 130 40.0
SGA_v2.0_scaffold4G02004 Striga asiatica HOM05D006672 ORTHO05D007769 1.3e-07 61.2 141 39.7
PGSC0003DMG400040414 Solanum tuberosum HOM05D006672 ORTHO05D007769 1.7e-07 60.8 125 39.2
Solyc03g120740.1 Solanum lycopersicum HOM05D006672 ORTHO05D007769 3.0e-07 60.1 160 35.0
Sopen03g039560 Solanum pennellii HOM05D006672 ORTHO05D007769 3.0e-07 60.1 160 35.0
CARHR015760 Cardamine hirsuta HOM05D006672 ORTHO05D007769 3.9e-07 59.7 127 40.9
Thhalv10008936m.g Eutrema salsugineum HOM05D006672 ORTHO05D007769 6.6e-07 58.9 130 38.5
Gohir.A05G131200 Gossypium hirsutum HOM05D006672 ORTHO05D007769 8.6e-07 58.5 160 32.5
Actinidia08988 Actinidia chinensis HOM05D000726 ORTHO05D007769 1.9e-06 57.4 124 38.7
AL1G27320 Arabidopsis lyrata HOM05D006672 ORTHO05D007769 1.9e-06 57.4 129 37.2
Carub.0001s1499 Capsella rubella HOM05D006672 ORTHO05D007769 1.9e-06 57.4 129 36.4
MELO3C012968.2 Cucumis melo HOM05D006672 ORTHO05D007769 2.5e-06 57.0 139 34.5
BcaB03g13070 Brassica carinata HOM05D005761 ORTHO05D007286 5.6e-06 55.8 131 36.6


User provided reference genes

Program Settings