Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.D9EGN0 Arachis hypogaea HOM05D032153 ORTHO05D006647 7.5e-130 467.2 241 100.0
arahy.Tifrunner.gnm1.ann1.8Z92Q7 Arachis hypogaea HOM05D032153 ORTHO05D087195 2.1e-68 263.1 146 95.9
arahy.Tifrunner.gnm1.ann1.AF2VIN Arachis hypogaea HOM05D032153 ORTHO05D085069 9.3e-48 194.5 132 83.3
arahy.Tifrunner.gnm1.ann1.4RQ7RI Arachis hypogaea HOM05D005451 ORTHO05D006647 9.7e-21 104.8 63 81.0
arahy.Tifrunner.gnm1.ann1.EAT06N Arachis hypogaea HOM05D005451 ORTHO05D006647 9.7e-21 104.8 63 81.0
arahy.Tifrunner.gnm1.ann1.N3Z787 Arachis hypogaea HOM05D005451 ORTHO05D006647 2.8e-20 103.2 63 79.4
arahy.Tifrunner.gnm1.ann1.WMHD1H Arachis hypogaea HOM05D005451 ORTHO05D006647 2.8e-20 103.2 63 79.4
arahy.Tifrunner.gnm1.ann1.XN7WR1 Arachis hypogaea HOM05D005451 ORTHO05D006647 2.8e-20 103.2 63 79.4
Lalb_Chr20g0112581 Lupinus albus HOM05D005451 ORTHO05D006647 8.2e-20 101.7 78 70.5
Ca_08909_v3 Cicer arietinum L. HOM05D005451 ORTHO05D006647 1.1e-19 101.3 58 82.8
Lj1g0026290 Lotus japonicus HOM05D005451 ORTHO05D006647 1.1e-19 101.3 47 93.6
Psat3g042120 Pisum sativum HOM05D005451 ORTHO05D006647 1.1e-19 101.3 58 82.8
TPR.G32842 Trifolium pratense HOM05D005451 ORTHO05D006647 2.4e-19 100.1 58 81.0
Hund19112 Selenicereus undatus HOM05D005451 ORTHO05D006647 3.1e-19 99.8 47 91.5
Sc02g0001580 Simmondsia chinensis HOM05D005451 ORTHO05D006647 3.1e-19 99.8 47 93.6
AL5G34100 Arabidopsis lyrata HOM05D005451 ORTHO05D006647 4.1e-19 99.4 47 91.5
EL10Ac3g07190 Beta vulgaris HOM05D005451 ORTHO05D006647 4.1e-19 99.4 47 91.5
Carub.0005s1975 Capsella rubella HOM05D005451 ORTHO05D006647 4.1e-19 99.4 47 91.5
Cfa017630 Carpinus fangiana HOM05D005451 ORTHO05D006647 7.0e-19 98.6 63 74.6
Haze_20523 Corylus avellana HOM05D005451 ORTHO05D006647 7.0e-19 98.6 63 74.6
CARHR163080 Cardamine hirsuta HOM05D005451 ORTHO05D006647 1.2e-18 97.8 47 89.4
Thhalv10017445m.g Eutrema salsugineum HOM05D005451 ORTHO05D006647 1.2e-18 97.8 47 89.4
Lsat_1_v5_gn_2_107281 Lactuca sativa HOM05D005451 ORTHO05D006647 1.2e-18 97.8 57 78.9
QL07p043063 Quercus lobata HOM05D005451 ORTHO05D006647 1.2e-18 97.8 62 74.2
CSS0014192 Camellia sinensis var. sinensis HOM05D005451 ORTHO05D006647 1.6e-18 97.4 58 77.6
CSS0019333 Camellia sinensis var. sinensis HOM05D005451 ORTHO05D006647 1.6e-18 97.4 58 77.6
FAN15G0973 Fragaria x ananassa HOM05D005451 ORTHO05D006647 1.6e-18 97.4 47 89.4
Gohir.A09G145800 Gossypium hirsutum HOM05D005451 ORTHO05D006647 1.6e-18 97.4 59 76.3
THA.LOC104805223 Tarenaya hassleriana HOM05D005451 ORTHO05D006647 1.6e-18 97.4 47 89.4
Aa31LG10G8270 Aethionema arabicum HOM05D005451 ORTHO05D006647 2.0e-18 97.1 47 89.4
Aa31LG10G8380 Aethionema arabicum HOM05D005451 ORTHO05D006647 2.0e-18 97.1 47 89.4
AUR62040850 Chenopodium quinoa HOM05D005451 ORTHO05D006647 2.0e-18 97.1 47 89.4
Dinv35793 Davidia involucrata HOM05D005451 ORTHO05D006647 2.0e-18 97.1 58 77.6
AT3G53220 Arabidopsis thaliana HOM05D005451 ORTHO05D006647 2.6e-18 96.7 47 87.2
ClCG04G009330 Citrullus lanatus HOM05D005451 ORTHO05D006647 2.6e-18 96.7 63 71.4
Duzib106G1340 Durio zibethinus HOM05D005451 ORTHO05D006647 2.6e-18 96.7 47 87.2
BcaB02g07801 Brassica carinata HOM05D005451 ORTHO05D006647 3.5e-18 96.3 47 87.2
A07p21440 Brassica napus HOM05D005451 ORTHO05D006647 3.5e-18 96.3 47 87.2
C06p21050 Brassica napus HOM05D005451 ORTHO05D006647 3.5e-18 96.3 47 87.2
BolC6t37290H Brassica oleracea HOM05D005451 ORTHO05D006647 3.5e-18 96.3 47 87.2
BraA07t29831Z Brassica rapa HOM05D005451 ORTHO05D006647 3.5e-18 96.3 47 87.2
MELO3C024468.2 Cucumis melo HOM05D005451 ORTHO05D006647 3.5e-18 96.3 47 87.2
Eucgr.A01667 Eucalyptus grandis HOM05D005451 ORTHO05D006647 3.5e-18 96.3 47 87.2
FvH4_6g16520 Fragaria vesca HOM05D005451 ORTHO05D006647 3.5e-18 96.3 47 87.2
FAN05G1419 Fragaria x ananassa HOM05D005451 ORTHO05D006647 3.5e-18 96.3 47 87.2
FAN14G0704 Fragaria x ananassa HOM05D005451 ORTHO05D006647 3.5e-18 96.3 47 87.2
Gohir.A04G071800 Gossypium hirsutum HOM05D005451 ORTHO05D006647 3.5e-18 96.3 47 87.2
Gohir.D04G110300 Gossypium hirsutum HOM05D005451 ORTHO05D006647 3.5e-18 96.3 47 87.2
Gorai.009G414400 Gossypium raimondii HOM05D005451 ORTHO05D006647 3.5e-18 96.3 47 87.2
MD12G1109800 Malus domestica HOM05D005451 ORTHO05D006647 3.5e-18 96.3 47 87.2
Medtr7g102130 Medicago truncatula HOM05D005451 ORTHO05D006647 3.5e-18 96.3 58 79.3
Phvul.001G179600 Phaseolus vulgaris HOM05D005451 ORTHO05D006647 3.5e-18 96.3 63 73.0
RcHm_v2.0_Chr3g0470431 Rosa chinensis HOM05D005451 ORTHO05D006647 3.5e-18 96.3 47 87.2
SalBow6G0361 Salvia bowleyana HOM05D005451 ORTHO05D006647 3.5e-18 96.3 47 87.2
Sp5g09120 Schrenkiella parvula HOM05D005451 ORTHO05D006647 3.5e-18 96.3 47 87.2
TWI53G1613 Tripterygium wilfordii HOM05D005451 ORTHO05D006647 3.5e-18 96.3 47 87.2
VMungo1383G1956 Vigna mungo HOM05D005451 ORTHO05D006647 3.5e-18 96.3 63 73.0
Migut.L01710 Erythranthe guttata HOM05D005451 ORTHO05D006647 4.5e-18 95.9 58 75.9
Thhalv10010819m.g Eutrema salsugineum HOM05D005451 ORTHO05D006647 4.5e-18 95.9 47 87.2
FAN02G0799 Fragaria x ananassa HOM05D005451 ORTHO05D006647 4.5e-18 95.9 58 75.9
Hma1.2p1_0828F.1_g225120 Hydrangea macrophylla HOM05D005451 ORTHO05D006647 4.5e-18 95.9 47 85.1
SGA_v2.0_scaffold84G26539 Striga asiatica HOM05D005451 ORTHO05D006647 4.5e-18 95.9 58 75.9
Thecc.05G068800 Theobroma cacao HOM05D005451 ORTHO05D006647 4.5e-18 95.9 47 87.2
Actinidia26660 Actinidia chinensis HOM05D005451 ORTHO05D006647 5.9e-18 95.5 58 75.9
Ciclev10017163m.g Citrus clementina HOM05D005451 ORTHO05D006647 5.9e-18 95.5 63 71.4
Manes.08G011600 Manihot esculenta HOM05D005451 ORTHO05D006647 5.9e-18 95.5 63 71.4
PSO063G2125 Papaver somniferum HOM05D005451 ORTHO05D006647 5.9e-18 95.5 63 71.4
PSO339G4566 Papaver somniferum HOM05D005451 ORTHO05D006647 5.9e-18 95.5 63 71.4
HPP92_021403 Vanilla planifolia HOM05D005451 ORTHO05D006647 5.9e-18 95.5 48 81.2
HPP92_027104 Vanilla planifolia HOM05D005451 ORTHO05D006647 5.9e-18 95.5 48 81.2
MSTRG.26689 Avicennia marina HOM05D005451 ORTHO05D006647 7.7e-18 95.1 47 85.1
FAN09G1715 Fragaria x ananassa HOM05D005451 ORTHO05D006647 7.7e-18 95.1 47 85.1
Nn6g35270 Nelumbo nucifera HOM05D005451 ORTHO05D006647 7.7e-18 95.1 47 89.4
Potri.006G123100 Populus trichocarpa HOM05D005451 ORTHO05D006647 7.7e-18 95.1 63 71.4
PGR004G0040 Punica granatum HOM05D005451 ORTHO05D006647 7.7e-18 95.1 58 75.9
Sabra06G0097400 Salix brachista HOM05D005451 ORTHO05D006647 7.7e-18 95.1 63 71.4
HanXRQChr11g0350471 Helianthus annuus HOM05D005451 ORTHO05D006647 1.0e-17 94.7 58 75.9
Prupe.7G128400 Prunus persica HOM05D005451 ORTHO05D006647 1.0e-17 94.7 47 85.1
Sed0015565 Sechium edule HOM05D005451 ORTHO05D006647 1.0e-17 94.7 46 84.8
TAR369G0910 Trochodendron aralioides HOM05D005451 ORTHO05D006647 1.0e-17 94.7 63 73.0
Actinidia28910 Actinidia chinensis HOM05D005451 ORTHO05D006647 1.3e-17 94.4 58 75.9
Cc06_g04340 Coffea canephora HOM05D005451 ORTHO05D006647 1.3e-17 94.4 58 74.1
Atru.chr8.1787 Acer truncatum HOM05D005451 ORTHO05D006647 1.7e-17 94.0 63 69.8
AUR62030367 Chenopodium quinoa HOM05D005451 ORTHO05D006647 1.7e-17 94.0 47 87.2
DCAR_015003 Daucus carota HOM05D005451 ORTHO05D006647 1.7e-17 94.0 46 87.0
GSVIVG01033652001 Vitis vinifera HOM05D005451 ORTHO05D006647 1.7e-17 94.0 63 71.4
CDE09G0643 Ceratophyllum demersum HOM05D005451 ORTHO05D006647 2.2e-17 93.6 47 85.1
COL.COLO4_26945 Corchorus olitorius HOM05D005451 ORTHO05D006647 2.2e-17 93.6 47 85.1
CsaV3_6G039920 Cucumis sativus L. HOM05D005451 ORTHO05D006647 2.2e-17 93.6 47 85.1
ECA248G2056 Erigeron canadensis HOM05D005451 ORTHO05D006647 2.2e-17 93.6 58 74.1
Lsat_1_v5_gn_1_51620 Lactuca sativa HOM05D005451 ORTHO05D006647 2.2e-17 93.6 58 74.1
TPR.G10764 Trifolium pratense HOM05D005451 ORTHO05D006647 2.2e-17 93.6 58 75.9
unitig_899.g15217 Utricularia gibba HOM05D000548 ORTHO05D000987 2.2e-17 93.6 47 85.1
CAN.G900.23 Capsicum annuum HOM05D005451 ORTHO05D006647 2.9e-17 93.2 58 74.1
Duzib128G0902 Durio zibethinus HOM05D005451 ORTHO05D006647 2.9e-17 93.2 47 85.1
Peaxi162Scf00722g00002 Petunia axillaris HOM05D005451 ORTHO05D006647 2.9e-17 93.2 58 74.1
TAR623G1526 Trochodendron aralioides HOM05D005451 ORTHO05D006647 2.9e-17 93.2 47 87.2
CANSAT80G0106 Cannabis sativa HOM05D005451 ORTHO05D006647 3.8e-17 92.8 63 69.8
Rhsim03G0090700 Rhododendron simsii HOM05D005451 ORTHO05D006647 3.8e-17 92.8 58 74.1
Solyc09g008290.4 Solanum lycopersicum HOM05D005451 ORTHO05D006647 3.8e-17 92.8 58 72.4
Aqoxy1G01137 Aquilegia oxysepala HOM05D005451 ORTHO05D006647 5.0e-17 92.4 47 87.2
BcaB02g08532 Brassica carinata HOM05D005451 ORTHO05D006647 5.0e-17 92.4 47 87.2
BcaC02g09178 Brassica carinata HOM05D005451 ORTHO05D006647 5.0e-17 92.4 47 87.2
BcaC02g09179 Brassica carinata HOM05D005451 ORTHO05D006647 5.0e-17 92.4 47 87.2
C04p39740 Brassica napus HOM05D005451 ORTHO05D006647 5.0e-17 92.4 47 87.2
BolC4t25546H Brassica oleracea HOM05D005451 ORTHO05D006647 5.0e-17 92.4 47 87.2
Zm00001eb074150 Zea mays HOM05D005451 ORTHO05D006647 5.0e-17 92.4 48 83.3
CiPaw.09G171400 Carya illinoinensis HOM05D005451 ORTHO05D006647 8.5e-17 91.7 73 64.4
Os04g0560200 Oryza sativa ssp. japonica HOM05D005451 ORTHO05D006647 8.5e-17 91.7 47 85.1
Sopen09g003110 Solanum pennellii HOM05D005451 ORTHO05D006647 8.5e-17 91.7 58 72.4
PGSC0003DMG400003891 Solanum tuberosum HOM05D005451 ORTHO05D006647 8.5e-17 91.7 58 72.4
Glyma.19G184600 Glycine max HOM05D005451 ORTHO05D006647 1.1e-16 91.3 87 59.8
MD04G1091800 Malus domestica HOM05D005451 ORTHO05D006647 1.5e-16 90.9 47 83.0
Nitab4.5_0000578g0070 Nicotiana tabacum HOM05D005451 ORTHO05D006647 1.9e-16 90.5 58 72.4
Hund24635 Selenicereus undatus HOM05D005451 ORTHO05D006647 2.5e-16 90.1 59 72.9
SGA_v2.0_scaffold90G27758 Striga asiatica HOM05D005451 ORTHO05D006647 2.5e-16 90.1 58 72.4
A04p06230 Brassica napus HOM05D005451 ORTHO05D006647 4.2e-16 89.4 47 85.1
BraA04t16327Z Brassica rapa HOM05D005451 ORTHO05D006647 4.2e-16 89.4 47 85.1
FAN05G2954 Fragaria x ananassa HOM05D005451 ORTHO05D006647 4.2e-16 89.4 139 42.4
Gorai.006G162600 Gossypium raimondii HOM05D005451 ORTHO05D006647 4.2e-16 89.4 47 80.9
Nitab4.5_0008624g0010 Nicotiana tabacum HOM05D005451 ORTHO05D006647 5.5e-16 89.0 58 72.4
ATR0776G022 Amborella trichopoda HOM05D005451 ORTHO05D006647 1.6e-15 87.4 47 80.9
Glyma.03G184100 Glycine max HOM05D005451 ORTHO05D006647 2.7e-15 86.7 64 68.8
Dinv37322 Davidia involucrata HOM05D005451 ORTHO05D006647 3.6e-15 86.3 58 69.0
SMO203G0200 Selaginella moellendorffii HOM05D005451 ORTHO05D006647 2.0e-13 80.5 53 62.3
Mapoly0103s0022 Marchantia polymorpha HOM05D005451 ORTHO05D006647 5.7e-13 79.0 53 64.2
Pp3c9_9220 Physcomitrium patens HOM05D005451 ORTHO05D006647 1.7e-12 77.4 97 42.3
AagrBONN_evm.TU.Sc2ySwM_368.2032 Anthoceros agrestis HOM05D005451 ORTHO05D006647 2.4e-11 73.6 106 41.5
CBR_g19638 Chara braunii HOM05D005451 ORTHO05D006647 2.4e-11 73.6 48 58.3
PRCOL_00001867 Prasinoderma coloniale HOM05D005451 ORTHO05D006647 2.5e-08 63.5 45 51.1
MCO09G819 Micromonas commoda HOM05D005451 ORTHO05D006647 1.0e-06 58.2 46 47.8


User provided reference genes

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