Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.D6JQQQ Arachis hypogaea HOM05D005968 ORTHO05D007158 1.2e-177 626.3 295 100.0
Ca_21128_v3 Cicer arietinum L. HOM05D005968 ORTHO05D007158 6.9e-170 600.5 295 95.9
Glyma.02G204100 Glycine max HOM05D005968 ORTHO05D007158 1.2e-169 599.7 311 91.3
Glyma.17G073700 Glycine max HOM05D005968 ORTHO05D007158 5.8e-169 597.4 311 91.6
Lj4g0027447 Lotus japonicus HOM05D005968 ORTHO05D007158 6.0e-166 587.4 311 89.4
VMungo1215G2113 Vigna mungo HOM05D005968 ORTHO05D007158 3.7e-163 578.2 295 92.2
Thecc.09G030600 Theobroma cacao HOM05D005968 ORTHO05D007158 4.8e-163 577.8 313 86.3
CiPaw.15G168400 Carya illinoinensis HOM05D005968 ORTHO05D007158 3.1e-162 575.1 311 86.5
Manes.14G143600 Manihot esculenta HOM05D005968 ORTHO05D007158 4.1e-162 574.7 312 87.5
Nn8g39893 Nelumbo nucifera HOM05D005968 ORTHO05D007158 9.0e-162 573.5 311 85.9
Dinv41378 Davidia involucrata HOM05D005968 ORTHO05D007158 1.2e-161 573.2 311 86.5
Duzib187G1838 Durio zibethinus HOM05D005968 ORTHO05D007158 1.5e-161 572.8 313 85.3
Gohir.D08G273400 Gossypium hirsutum HOM05D005968 ORTHO05D007158 2.0e-161 572.4 307 86.6
Gorai.004G291800 Gossypium raimondii HOM05D005968 ORTHO05D007158 2.0e-161 572.4 307 86.6
Prupe.7G263000 Prunus persica HOM05D005968 ORTHO05D007158 4.5e-161 571.2 309 86.4
CSS0021374 Camellia sinensis var. sinensis HOM05D005968 ORTHO05D007158 1.0e-160 570.1 311 86.2
SalBow1G6433 Salvia bowleyana HOM05D005968 ORTHO05D007158 1.7e-160 569.3 300 87.0
Atru.chr7.47_Atru.chr7.48 Acer truncatum HOM05D005968 ORTHO05D007158 6.5e-160 567.4 313 85.6
CANSAT11G2689 Cannabis sativa HOM05D005968 ORTHO05D007158 1.4e-159 566.2 311 84.2
Potri.006G184300 Populus trichocarpa HOM05D005968 ORTHO05D007158 2.5e-159 565.5 311 85.9
MD15G1144700 Malus domestica HOM05D005968 ORTHO05D007158 5.5e-159 564.3 295 88.5
Dinv42854 Davidia involucrata HOM05D005968 ORTHO05D007158 9.4e-159 563.5 307 86.3
Gohir.A08G251800 Gossypium hirsutum HOM05D005968 ORTHO05D007158 9.4e-159 563.5 313 85.0
Hma1.2p1_0222F.1_g093590 Hydrangea macrophylla HOM05D005968 ORTHO05D007158 1.2e-158 563.1 313 84.7
QL02p093270 Quercus lobata HOM05D005968 ORTHO05D007158 2.1e-158 562.4 305 85.9
CiPaw.16G111000 Carya illinoinensis HOM05D005968 ORTHO05D007158 3.6e-158 561.6 305 85.6
MD02G1007400 Malus domestica HOM05D005968 ORTHO05D007158 1.0e-157 560.1 295 87.1
Ciclev10008980m.g Citrus clementina HOM05D005968 ORTHO05D007158 6.7e-157 557.4 313 83.7
Lsat_1_v5_gn_8_63401 Lactuca sativa HOM05D005968 ORTHO05D007158 8.8e-157 557.0 295 87.5
Nn2g12378 Nelumbo nucifera HOM05D005968 ORTHO05D007158 1.5e-156 556.2 308 84.4
TAR626G1902 Trochodendron aralioides HOM05D005968 ORTHO05D007158 5.7e-156 554.3 304 84.9
Psat0s2403g0360 Pisum sativum HOM05D005968 ORTHO05D007158 9.7e-156 553.5 295 88.5
FAN23G3092 Fragaria x ananassa HOM05D005968 ORTHO05D007158 1.7e-155 552.7 305 84.3
Eucgr.C02493 Eucalyptus grandis HOM05D005968 ORTHO05D007158 2.2e-155 552.4 311 83.6
Potri.018G106700 Populus trichocarpa HOM05D005968 ORTHO05D007158 2.2e-155 552.4 306 84.3
HanXRQChr09g0245781 Helianthus annuus HOM05D005968 ORTHO05D007158 2.8e-155 552.0 308 84.1
ECA236G4418 Erigeron canadensis HOM05D005968 ORTHO05D007158 3.7e-155 551.6 309 83.2
PSO561G0082 Papaver somniferum HOM05D005968 ORTHO05D007158 1.1e-154 550.1 305 84.6
Sed0018428 Sechium edule HOM05D005968 ORTHO05D007158 1.1e-154 550.1 308 84.4
PSO111G0029 Papaver somniferum HOM05D005968 ORTHO05D007158 1.8e-154 549.3 305 84.6
FvH4_1g00920 Fragaria vesca HOM05D005968 ORTHO05D007158 2.4e-154 548.9 311 82.6
DCAR_019393 Daucus carota HOM05D005968 ORTHO05D007158 1.2e-153 546.6 311 81.7
THA.LOC104803560 Tarenaya hassleriana HOM05D005968 ORTHO05D007158 1.5e-153 546.2 307 83.4
Migut.K00326 Erythranthe guttata HOM05D005968 ORTHO05D007158 5.9e-153 544.3 305 82.0
Cfa020826 Carpinus fangiana HOM05D002374 ORTHO05D003594 1.0e-152 543.5 277 90.6
FAN26G1763 Fragaria x ananassa HOM05D005968 ORTHO05D007158 1.0e-152 543.5 295 85.1
Sp7g28770 Schrenkiella parvula HOM05D005968 ORTHO05D007158 1.3e-152 543.1 315 80.3
Carub.0007s0964 Capsella rubella HOM05D005968 ORTHO05D007158 1.7e-152 542.7 317 79.8
PGSC0003DMG400011184 Solanum tuberosum HOM05D005968 ORTHO05D007158 2.2e-152 542.3 311 81.0
EL10Ac8g18668 Beta vulgaris HOM05D005968 ORTHO05D007158 2.9e-152 542.0 311 81.7
Thhalv10025727m.g Eutrema salsugineum HOM05D005968 ORTHO05D007158 8.5e-152 540.4 304 82.2
BolC1t00793H Brassica oleracea HOM05D005968 ORTHO05D007158 1.1e-151 540.0 308 81.2
C01p08040 Brassica napus HOM05D005968 ORTHO05D007158 1.4e-151 539.7 308 80.8
BcaC09g51877 Brassica carinata HOM05D005968 ORTHO05D007158 2.5e-151 538.9 308 80.8
A01p07280 Brassica napus HOM05D005968 ORTHO05D007158 2.5e-151 538.9 308 80.8
BraA01t00677Z Brassica rapa HOM05D005968 ORTHO05D007158 2.5e-151 538.9 308 80.8
BcaNung03430 Brassica carinata HOM05D005968 ORTHO05D007158 3.2e-151 538.5 300 82.0
Aqoxy2G01962_Aqoxy2G01963 Aquilegia oxysepala HOM05D005968 ORTHO05D007158 4.2e-151 538.1 312 81.7
AL7G21190 Arabidopsis lyrata HOM05D005968 ORTHO05D007158 4.2e-151 538.1 303 81.2
CARHR238800 Cardamine hirsuta HOM05D005968 ORTHO05D007158 2.7e-150 535.4 316 78.8
AT4G30900 Arabidopsis thaliana HOM05D005968 ORTHO05D007158 1.0e-149 533.5 317 78.2
Peaxi162Scf00401g00718 Petunia axillaris HOM05D005968 ORTHO05D007158 3.3e-148 528.5 287 86.1
Zm00001eb086780 Zea mays HOM05D005968 ORTHO05D007158 1.3e-147 526.6 305 79.7
DCAR_017911 Daucus carota HOM05D005968 ORTHO05D007158 2.8e-147 525.4 317 77.9
Lj7A459G65 Lonicera japonica HOM05D005968 ORTHO05D007158 6.3e-147 524.2 307 81.8
Zm00001eb420110 Zea mays HOM05D005968 ORTHO05D007158 7.0e-146 520.8 305 78.4
Sabra06G0140100 Salix brachista HOM05D005968 ORTHO05D007158 1.9e-143 512.7 415 63.9
Sabra18G0090900 Salix brachista HOM05D005968 ORTHO05D007158 4.2e-143 511.5 357 70.6
COL.COLO4_18810 Corchorus olitorius HOM05D000238 ORTHO05D007158 3.6e-142 508.4 277 84.8
Phvul.003G156000 Phaseolus vulgaris HOM05D005968 ORTHO05D007158 8.8e-141 503.8 275 87.6
SEGI_19747 Sequoiadendron giganteum HOM05D005968 ORTHO05D007158 1.2e-137 493.4 305 76.1
ATR0739G020 Amborella trichopoda HOM05D005968 ORTHO05D007158 1.0e-136 490.3 290 80.0
Actinidia38673 Actinidia chinensis HOM05D005968 ORTHO05D007158 4.7e-134 481.5 271 83.4
unitig_52.g17565 Utricularia gibba HOM05D005968 ORTHO05D007158 5.2e-133 478.0 311 72.0
TWI34G0179 Tripterygium wilfordii HOM05D005968 ORTHO05D007158 3.3e-132 475.3 295 77.3
CsaV3_1G028970 Cucumis sativus L. HOM05D005968 ORTHO05D007158 8.2e-131 470.7 292 76.7
PGR102G1528 Punica granatum HOM05D005968 ORTHO05D007158 8.2e-131 470.7 263 84.4
AUR62029822 Chenopodium quinoa HOM05D005968 ORTHO05D007158 5.9e-129 464.5 252 84.1
AUR62006466 Chenopodium quinoa HOM05D005968 ORTHO05D007158 1.7e-123 446.4 245 83.3
SGA_v2.0_scaffold347G49545 Striga asiatica HOM05D005968 ORTHO05D007158 1.1e-114 417.2 338 63.0
Mapoly0088s0077 Marchantia polymorpha HOM05D005968 ORTHO05D007158 3.5e-113 412.1 302 60.9
Nitab4.5_0003623g0020 Nicotiana tabacum HOM05D005968 ORTHO05D007158 6.2e-102 374.8 288 65.6
Lsat_1_v5_gn_7_66900 Lactuca sativa HOM05D005968 ORTHO05D007158 8.3e-99 364.4 259 68.7
Nitab4.5_0009876g0020 Nicotiana tabacum HOM05D005968 ORTHO05D007158 9.5e-95 350.9 176 90.3
Lalb_Chr12g0198711 Lupinus albus HOM05D005968 ORTHO05D007158 4.7e-94 348.6 168 95.8
TPR.G24830 Trifolium pratense HOM05D005968 ORTHO05D007158 1.8e-93 346.7 168 95.2
GSVIVG01023606001 Vitis vinifera HOM05D005968 ORTHO05D007158 1.3e-91 340.5 168 92.3
Medtr4g130830 Medicago truncatula HOM05D005968 ORTHO05D007158 4.9e-91 338.6 168 93.5
Cpa.g.sc46.157 Carica papaya HOM05D005968 ORTHO05D007158 2.4e-90 336.3 170 90.6
Lsat_1_v5_gn_4_18721 Lactuca sativa HOM05D005968 ORTHO05D007158 4.6e-89 332.0 181 84.0
Oeu038140.1 Olea europaea HOM05D005968 ORTHO05D007158 7.8e-89 331.3 165 90.3
Cc06_g14950 Coffea canephora HOM05D005968 ORTHO05D007158 5.1e-88 328.6 168 89.3
RcHm_v2.0_Chr2g0085611 Rosa chinensis HOM05D005968 ORTHO05D007158 1.5e-87 327.0 168 86.9
Eucgr.C02540 Eucalyptus grandis HOM05D005968 ORTHO05D007158 4.3e-87 325.5 168 88.1
CAN.G160.61 Capsicum annuum HOM05D005968 ORTHO05D007158 5.6e-87 325.1 168 87.5
MSTRG.26272 Avicennia marina HOM05D005968 ORTHO05D007158 9.5e-87 324.3 165 87.9
FAN28G0447 Fragaria x ananassa HOM05D005968 ORTHO05D007158 1.1e-85 320.9 168 85.7
Sc17g0006690 Simmondsia chinensis HOM05D005968 ORTHO05D007158 1.1e-85 320.9 160 91.2
Sopen07g001720 Solanum pennellii HOM05D005968 ORTHO05D007158 6.8e-85 318.2 168 85.1
AagrBONN_evm.TU.Sc2ySwM_362.192 Anthoceros agrestis HOM05D005968 ORTHO05D007158 1.0e-80 304.3 232 56.9
vmacro06082 Vaccinium macrocarpon HOM05D005968 ORTHO05D007158 6.6e-80 301.6 185 77.3
CiPaw.15G168700 Carya illinoinensis HOM05D005968 ORTHO05D007158 1.9e-79 300.1 186 78.0
Haze_19205 Corylus avellana HOM05D005968 ORTHO05D007158 2.9e-75 286.2 144 91.7
TPR.G24874 Trifolium pratense HOM05D005968 ORTHO05D007158 6.9e-61 238.4 117 93.2
Lalb_Chr12g0198701 Lupinus albus HOM05D005968 ORTHO05D007158 9.0e-61 238.0 117 94.0
Medtr4g130840 Medicago truncatula HOM05D005968 ORTHO05D007158 7.6e-60 235.0 117 91.5
RhsimUnG0158300 Rhododendron simsii HOM05D005968 ORTHO05D001263 4.2e-58 229.2 122 83.6
GSVIVG01023605001 Vitis vinifera HOM05D005968 ORTHO05D007158 2.3e-56 223.4 117 88.9
Dinv43246 Davidia involucrata HOM05D005968 ORTHO05D007158 5.1e-56 222.2 125 82.4
TAR636G1721 Trochodendron aralioides HOM05D005968 ORTHO05D007158 5.6e-55 218.8 110 90.0
ClCG06G012410 Citrullus lanatus HOM05D005968 ORTHO05D007158 9.6e-55 218.0 117 86.3
MELO3C010224.2 Cucumis melo HOM05D005968 ORTHO05D007158 1.6e-54 217.2 117 86.3
RcHm_v2.0_Chr2g0085621 Rosa chinensis HOM05D005968 ORTHO05D007158 2.1e-54 216.9 125 78.4
Sopen07g001730 Solanum pennellii HOM05D005968 ORTHO05D007158 3.1e-53 213.0 117 83.8
Aa31LG2G19470 Aethionema arabicum HOM05D005968 ORTHO05D007158 5.3e-53 212.2 117 82.1
Cc06_g14960 Coffea canephora HOM05D005968 ORTHO05D007158 6.9e-53 211.8 113 85.8
Solyc07g005620.2 Solanum lycopersicum HOM05D005968 ORTHO05D007158 6.9e-53 211.8 117 82.9
Oeu038141.1 Olea europaea HOM05D005968 ORTHO05D007158 2.9e-51 206.5 117 80.3
HPP92_004697 Vanilla planifolia HOM05D005968 ORTHO05D007158 7.1e-50 201.8 102 85.3
HPP92_004698 Vanilla planifolia HOM05D005968 ORTHO05D007158 1.2e-49 201.1 121 78.5
Os05g0279600 Oryza sativa ssp. japonica HOM05D005968 ORTHO05D007158 3.9e-48 196.1 117 75.2
Cpa.g.sc46.156 Carica papaya HOM05D005968 ORTHO05D007158 1.6e-46 190.7 137 69.3
CDE04G1812 Ceratophyllum demersum HOM05D005968 ORTHO05D007158 1.2e-36 157.9 89 77.5
arahy.Tifrunner.gnm1.ann1.4WLG0J Arachis hypogaea HOM05D005968 ORTHO05D007158 2.2e-35 153.7 238 39.9
arahy.Tifrunner.gnm1.ann1.HW7BNQ Arachis hypogaea HOM05D005968 ORTHO05D007158 4.2e-34 149.4 69 100.0
TAR636G0142 Trochodendron aralioides HOM05D002374 ORTHO05D003594 1.2e-28 131.3 77 76.6
Nitab4.5_0006121g0010 Nicotiana tabacum HOM05D005968 ORTHO05D007158 3.8e-27 126.3 66 87.9
Lsat_1_v5_gn_4_18741 Lactuca sativa HOM05D005968 ORTHO05D007158 2.7e-25 120.2 76 69.7
Eucgr.C02541 Eucalyptus grandis HOM05D005968 ORTHO05D007158 5.7e-23 112.5 71 77.5
SHI23672 Sapria himalayana HOM05D005968 ORTHO05D007158 2.5e-18 97.1 66 69.7
arahy.Tifrunner.gnm1.ann1.QXT71M Arachis hypogaea HOM05D005968 ORTHO05D007158 7.2e-18 95.5 46 95.7
arahy.Tifrunner.gnm1.ann1.VCSM30 Arachis hypogaea HOM05D005968 ORTHO05D007158 3.0e-16 90.1 47 87.2
arahy.Tifrunner.gnm1.ann1.HGKJ8P Arachis hypogaea HOM05D005968 ORTHO05D007158 1.8e-13 80.9 40 92.5
Oeu038782.2 Olea europaea HOM05D005968 ORTHO05D007158 1.0e-08 65.1 56 57.1
Haze_19213 Corylus avellana HOM05D000344 ORTHO05D005296 1.3e-06 58.2 29 86.2


User provided reference genes

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