Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.D6FGWZ Arachis hypogaea HOM05D005997 ORTHO05D008323 1.1e-192 676.4 341 100.0
arahy.Tifrunner.gnm1.ann1.N1CS9Q Arachis hypogaea HOM05D005997 ORTHO05D008323 1.7e-79 300.4 150 96.0
arahy.Tifrunner.gnm1.ann1.JACZ02 Arachis hypogaea HOM05D005997 ORTHO05D008323 8.2e-66 255.0 152 85.5
Phvul.006G051400 Phaseolus vulgaris HOM05D005997 ORTHO05D008323 4.0e-60 236.1 150 78.0
VMungo0540G2314 Vigna mungo HOM05D005997 ORTHO05D008323 6.7e-60 235.3 150 77.3
TPR.G1907 Trifolium pratense HOM05D005997 ORTHO05D008323 4.4e-59 232.6 150 77.3
Lalb_Chr06g0174051 Lupinus albus HOM05D005997 ORTHO05D008323 7.5e-59 231.9 150 75.3
Glyma.08G325100 Glycine max HOM05D005997 ORTHO05D008323 9.7e-59 231.5 150 76.7
Lj6g0009736 Lotus japonicus HOM05D005997 ORTHO05D008323 3.7e-58 229.6 150 75.3
Medtr3g055920 Medicago truncatula HOM05D005997 ORTHO05D008323 6.3e-58 228.8 150 76.0
Ca_20145_v3 Cicer arietinum L. HOM05D005997 ORTHO05D008323 5.3e-57 225.7 150 73.3
Psat5g172000 Pisum sativum HOM05D005997 ORTHO05D008323 2.0e-56 223.8 150 73.3
Ca_20142_v3 Cicer arietinum L. HOM05D005997 ORTHO05D008323 3.5e-56 223.0 150 73.3
Dinv40826 Davidia involucrata HOM05D005997 ORTHO05D008323 7.7e-56 221.9 150 72.0
FvH4_3g23860 Fragaria vesca HOM05D005997 ORTHO05D008323 1.1e-54 218.0 149 72.5
FAN21G1688 Fragaria x ananassa HOM05D005997 ORTHO05D008323 1.1e-54 218.0 150 72.0
CiPaw.12G135200 Carya illinoinensis HOM05D005997 ORTHO05D008323 1.9e-54 217.2 150 72.0
FAN25G0611 Fragaria x ananassa HOM05D005997 ORTHO05D008323 1.9e-54 217.2 193 62.7
Eucgr.F03518 Eucalyptus grandis HOM05D005997 ORTHO05D008323 3.2e-54 216.5 150 71.3
RcHm_v2.0_Chr5g0042181 Rosa chinensis HOM05D005997 ORTHO05D008323 7.2e-54 215.3 150 71.3
RcHm_v2.0_Chr5g0042111 Rosa chinensis HOM05D005997 ORTHO05D008323 1.2e-53 214.5 150 70.0
Ciclev10009024m.g Citrus clementina HOM05D005997 ORTHO05D008323 1.0e-52 211.5 150 68.7
TWI38G0893 Tripterygium wilfordii HOM05D005997 ORTHO05D008323 1.4e-52 211.1 150 70.0
Cc05_g14560 Coffea canephora HOM05D005997 ORTHO05D008323 1.8e-52 210.7 150 70.0
Sc07g0002940 Simmondsia chinensis HOM05D005997 ORTHO05D008323 1.8e-52 210.7 150 69.3
Duzib213G0008 Durio zibethinus HOM05D005997 ORTHO05D008323 5.2e-52 209.1 150 68.0
Actinidia00103 Actinidia chinensis HOM05D005997 ORTHO05D008323 6.8e-52 208.8 150 68.7
Solyc07g065180.3 Solanum lycopersicum HOM05D005997 ORTHO05D008323 6.8e-52 208.8 150 67.3
Potri.008G180300 Populus trichocarpa HOM05D005997 ORTHO05D008323 8.8e-52 208.4 150 68.0
CANSAT11G0206 Cannabis sativa HOM05D005997 ORTHO05D008323 1.5e-51 207.6 182 60.4
PGSC0003DMG400022292 Solanum tuberosum HOM05D005997 ORTHO05D008323 1.5e-51 207.6 150 68.0
TAR624G0829 Trochodendron aralioides HOM05D005997 ORTHO05D008323 2.0e-51 207.2 150 68.0
Nitab4.5_0010102g0010 Nicotiana tabacum HOM05D005997 ORTHO05D008323 3.4e-51 206.5 150 67.3
Thecc.07G024000 Theobroma cacao HOM05D005997 ORTHO05D008323 4.4e-51 206.1 150 67.3
Lsat_1_v5_gn_7_114661 Lactuca sativa HOM05D005997 ORTHO05D008323 5.7e-51 205.7 152 65.1
Sopen07g033400 Solanum pennellii HOM05D005997 ORTHO05D008323 5.7e-51 205.7 150 66.7
Hma1.2p1_0036F.1_g022850 Hydrangea macrophylla HOM05D005997 ORTHO05D008323 7.5e-51 205.3 150 66.0
Gohir.D01G072400 Gossypium hirsutum HOM05D005997 ORTHO05D008323 9.8e-51 204.9 150 67.3
Sabra08G0137600 Salix brachista HOM05D005997 ORTHO05D008323 9.8e-51 204.9 150 65.3
Gorai.002G095400 Gossypium raimondii HOM05D005997 ORTHO05D008323 1.7e-50 204.1 150 66.7
Os03g0587100 Oryza sativa ssp. japonica HOM05D005997 ORTHO05D008323 3.7e-50 203.0 150 65.3
unitig_899.g15278 Utricularia gibba HOM05D005997 ORTHO05D008323 3.7e-50 203.0 150 66.0
GSVIVG01037764001 Vitis vinifera HOM05D005997 ORTHO05D008323 4.8e-50 202.6 150 66.0
Nitab4.5_0001160g0200 Nicotiana tabacum HOM05D005997 ORTHO05D008323 6.3e-50 202.2 150 67.3
CAN.G337.36 Capsicum annuum HOM05D005997 ORTHO05D008323 8.3e-50 201.8 150 65.3
DCAR_022603 Daucus carota HOM05D005997 ORTHO05D008323 8.3e-50 201.8 150 65.3
Gohir.A01G086200 Gossypium hirsutum HOM05D005997 ORTHO05D008323 1.4e-49 201.1 173 60.1
Migut.M01687 Erythranthe guttata HOM05D005997 ORTHO05D008323 1.8e-49 200.7 150 66.0
SGA_v2.0_scaffold168G38522 Striga asiatica HOM05D005997 ORTHO05D008323 1.8e-49 200.7 177 59.3
CsaV3_7G018710 Cucumis sativus L. HOM05D005997 ORTHO05D008323 3.1e-49 199.9 150 64.7
Manes.03G134100 Manihot esculenta HOM05D005997 ORTHO05D008323 3.1e-49 199.9 150 64.7
THA.LOC104826490 Tarenaya hassleriana HOM05D005997 ORTHO05D008323 5.4e-49 199.1 150 63.3
ClCG09G021010 Citrullus lanatus HOM05D005997 ORTHO05D008323 7.0e-49 198.7 150 64.7
AL1G58220 Arabidopsis lyrata HOM05D005997 ORTHO05D008323 9.1e-49 198.4 150 62.7
Oeu019619.1 Olea europaea HOM05D005997 ORTHO05D008323 9.1e-49 198.4 150 66.0
Prupe.4G230500 Prunus persica HOM05D005997 ORTHO05D008323 9.1e-49 198.4 150 68.7
Sed0012266 Sechium edule HOM05D005997 ORTHO05D008323 9.1e-49 198.4 163 62.6
PGR044G2356 Punica granatum HOM05D005997 ORTHO05D008323 1.2e-48 198.0 150 64.7
MELO3C024895.2 Cucumis melo HOM05D005997 ORTHO05D008323 1.6e-48 197.6 150 64.7
A06p03040 Brassica napus HOM05D005997 ORTHO05D008323 2.0e-48 197.2 165 60.0
BraA06t23516Z Brassica rapa HOM05D005997 ORTHO05D008323 2.0e-48 197.2 165 60.0
AT1G50575 Arabidopsis thaliana HOM05D005997 ORTHO05D008323 2.7e-48 196.8 150 62.0
MSTRG.6975 Avicennia marina HOM05D005997 ORTHO05D008323 2.7e-48 196.8 150 67.3
Glyma.18G084600 Glycine max HOM05D005997 ORTHO05D008323 2.7e-48 196.8 137 72.3
BcaB07g33491 Brassica carinata HOM05D005997 ORTHO05D008323 3.5e-48 196.4 150 63.3
Carub.0001s3961 Capsella rubella HOM05D005997 ORTHO05D008323 5.9e-48 195.7 173 56.6
ECA236G3940 Erigeron canadensis HOM05D004336 ORTHO05D005367 5.9e-48 195.7 153 62.7
PSO210G1255 Papaver somniferum HOM05D005997 ORTHO05D008323 5.9e-48 195.7 150 62.0
Sp1g37390 Schrenkiella parvula HOM05D005997 ORTHO05D008323 5.9e-48 195.7 150 62.7
Aa31LG10G3760 Aethionema arabicum HOM05D005997 ORTHO05D008323 7.7e-48 195.3 150 62.0
COL.COLO4_09766 Corchorus olitorius HOM05D005997 ORTHO05D008323 7.7e-48 195.3 150 64.0
Nn1g03269 Nelumbo nucifera HOM05D005997 ORTHO05D008323 1.0e-47 194.9 150 63.3
Thhalv10011693m.g Eutrema salsugineum HOM05D005997 ORTHO05D008323 1.3e-47 194.5 150 62.0
CARHR040570 Cardamine hirsuta HOM05D005997 ORTHO05D008323 3.8e-47 193.0 165 58.2
SalBow8G0955 Salvia bowleyana HOM05D005997 ORTHO05D008323 3.8e-47 193.0 150 63.3
BcaC08g43226 Brassica carinata HOM05D005997 ORTHO05D008323 6.5e-47 192.2 165 58.2
C06p05740 Brassica napus HOM05D005997 ORTHO05D008323 6.5e-47 192.2 165 58.2
BolC6t35684H Brassica oleracea HOM05D005997 ORTHO05D008323 6.5e-47 192.2 165 58.2
MD11G1206400 Malus domestica HOM05D005997 ORTHO05D008323 8.5e-47 191.8 150 67.3
Aqoxy1G04030 Aquilegia oxysepala HOM05D005997 ORTHO05D008323 1.5e-46 191.0 150 61.3
Rhsim06G0225700 Rhododendron simsii HOM05D005997 ORTHO05D008323 1.2e-45 188.0 150 64.0
EL10Ac4g07628 Beta vulgaris HOM05D005997 ORTHO05D008323 5.2e-44 182.6 165 56.4
SEGI_04256 Sequoiadendron giganteum HOM05D005997 ORTHO05D008323 1.2e-43 181.4 153 58.2
Zm00001eb049320 Zea mays HOM05D005997 ORTHO05D008323 2.6e-43 180.3 183 51.9
Dinv10299 Davidia involucrata HOM05D005997 ORTHO05D008323 4.4e-43 179.5 126 69.0
ATR0712G169 Amborella trichopoda HOM05D005997 ORTHO05D008323 5.7e-43 179.1 148 58.1
Lj1C884G3 Lonicera japonica HOM05D005997 ORTHO05D008323 1.3e-42 177.9 175 56.0
CDE07G1873 Ceratophyllum demersum HOM05D005997 ORTHO05D008323 1.6e-40 171.0 149 59.1
AagrBONN_evm.TU.Sc2ySwM_362.871 Anthoceros agrestis HOM05D005997 ORTHO05D008323 3.5e-40 169.9 162 53.7
MBI16_g42314_MAGBIO Magnolia biondii HOM05D005997 ORTHO05D008323 1.0e-39 168.3 150 57.3
SMO196G0283 Selaginella moellendorffii HOM05D005997 ORTHO05D008323 5.0e-39 166.0 150 55.3
Psat5g171680 Pisum sativum HOM05D005997 ORTHO05D008323 2.5e-38 163.7 91 83.5
Pp3c14_23810 Physcomitrium patens HOM05D005997 ORTHO05D008323 3.6e-37 159.8 150 52.0
HPP92_007350 Vanilla planifolia HOM05D005997 ORTHO05D008323 6.1e-37 159.1 154 51.9
PGR031G3624 Punica granatum HOM05D005997 ORTHO05D008323 1.0e-36 158.3 124 62.9
QL08p008622 Quercus lobata HOM05D005997 ORTHO05D008323 1.0e-36 158.3 90 81.1
Atru.BG.132.p Acer truncatum HOM05D005997 ORTHO05D008323 1.5e-35 154.5 90 80.0
vmacro11568 Vaccinium macrocarpon HOM05D005997 ORTHO05D008323 2.6e-35 153.7 99 74.7
arahy.Tifrunner.gnm1.ann1.EBVM73 Arachis hypogaea HOM05D005997 ORTHO05D004267 3.4e-35 153.3 228 46.5
CSS0025804 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 5.7e-35 152.5 129 61.2
Haze_09774 Corylus avellana HOM05D005997 ORTHO05D008323 1.7e-34 151.0 150 56.7
Cpa.g.sc12.206 Carica papaya HOM05D005997 ORTHO05D008323 1.8e-33 147.5 89 75.3
arahy.Tifrunner.gnm1.ann1.SE7UXR Arachis hypogaea HOM05D003648 ORTHO05D004267 4.6e-32 142.9 88 87.5
Aqoxy1G04027 Aquilegia oxysepala HOM05D005997 ORTHO05D008323 1.0e-31 141.7 123 56.1
PSO302G0218 Papaver somniferum HOM05D005997 ORTHO05D008323 1.3e-31 141.4 89 71.9
arahy.Tifrunner.gnm1.ann1.AL1Y46 Arachis hypogaea HOM05D003648 ORTHO05D004267 3.9e-31 139.8 89 87.6
AUR62040674 Chenopodium quinoa HOM05D005997 ORTHO05D008323 3.9e-31 139.8 89 69.7
AUR62015935 Chenopodium quinoa HOM05D005997 ORTHO05D008323 1.9e-30 137.5 89 68.5
Peaxi162Scf00047g00845 Petunia axillaris HOM05D005997 ORTHO05D008323 1.2e-29 134.8 150 50.7
CSS0048391 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 5.6e-22 109.4 103 56.3
MCO09G728 Micromonas commoda HOM05D004293 ORTHO05D005044 9.5e-22 108.6 153 38.6
MCO11G065 Micromonas commoda HOM05D004293 ORTHO05D005044 8.1e-21 105.5 153 37.9
PRCOL_00002636 Prasinoderma coloniale HOM05D005997 ORTHO05D008323 1.1e-20 105.1 155 40.6
SEGI_34153 Sequoiadendron giganteum HOM05D005997 ORTHO05D008323 1.5e-19 101.3 59 76.3
CSS0044071 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 2.2e-18 97.4 56 78.6
Cre01.g039850 Chlamydomonas reinhardtii HOM05D005997 ORTHO05D005044 1.6e-16 91.3 153 35.3
PRCOL_00000116 Prasinoderma coloniale HOM05D005997 ORTHO05D008323 4.6e-16 89.7 197 33.0
CSS0025137 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 7.8e-16 89.0 50 80.0
QL05p025044 Quercus lobata HOM05D005997 ORTHO05D008323 1.9e-14 84.3 75 58.7
QL08p004262 Quercus lobata HOM05D005997 ORTHO05D008323 8.1e-13 79.0 74 54.1
QL08p058329 Quercus lobata HOM05D005997 ORTHO05D008323 8.1e-13 79.0 74 54.1
Rhsim03G0100400 Rhododendron simsii HOM05D005997 ORTHO05D338268 1.7e-10 71.2 109 40.4
QL08p058354 Quercus lobata HOM05D005997 ORTHO05D007626 3.8e-10 70.1 72 52.8
arahy.Tifrunner.gnm1.ann1.U3B0HF Arachis hypogaea HOM05D003842 ORTHO05D026908 6.0e-08 62.8 36 86.1
Lsat_1_v5_gn_8_39280 Lactuca sativa HOM05D005997 ORTHO05D230963 5.1e-07 59.7 48 56.2


User provided reference genes

Program Settings