Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.D5FDUQ Arachis hypogaea HOM05D000974 ORTHO05D007456 1.0e-168 596.7 300 100.0
arahy.Tifrunner.gnm1.ann1.LG8YER Arachis hypogaea HOM05D000974 ORTHO05D007456 1.0e-168 596.7 300 100.0
Lalb_Chr11g0066601 Lupinus albus HOM05D000974 ORTHO05D007456 1.3e-120 436.8 301 72.1
Glyma.04G238050 Glycine max HOM05D000974 ORTHO05D007456 2.3e-120 436.0 300 73.3
Glyma.06G125900 Glycine max HOM05D000974 ORTHO05D007456 6.7e-120 434.5 298 73.2
TPR.G17305 Trifolium pratense HOM05D000974 ORTHO05D007456 1.5e-116 423.3 305 70.8
Ca_16682_v3 Cicer arietinum L. HOM05D000974 ORTHO05D007456 7.6e-116 421.0 295 72.2
Medtr3g090955 Medicago truncatula HOM05D000974 ORTHO05D007456 2.1e-113 412.9 301 70.1
Phvul.009G137800 Phaseolus vulgaris HOM05D000974 ORTHO05D007456 1.0e-107 394.0 302 64.9
VMungo1309G2916 Vigna mungo HOM05D000974 ORTHO05D007456 4.2e-106 388.7 304 62.8
Lj1g0000480 Lotus japonicus HOM05D000974 ORTHO05D007456 1.6e-105 386.7 299 66.2
Gohir.D09G178500 Gossypium hirsutum HOM05D000974 ORTHO05D007456 1.1e-103 380.6 298 64.8
Thecc.03G193600 Theobroma cacao HOM05D000974 ORTHO05D007456 1.1e-103 380.6 296 65.9
COL.COLO4_35640 Corchorus olitorius HOM05D000974 ORTHO05D007456 1.9e-103 379.8 297 64.0
Gohir.A09G183700 Gossypium hirsutum HOM05D000974 ORTHO05D007456 4.3e-103 378.6 298 65.4
MD07G1285800 Malus domestica HOM05D000974 ORTHO05D007456 2.8e-102 375.9 311 62.1
TWI39G1278 Tripterygium wilfordii HOM05D000974 ORTHO05D007456 2.8e-102 375.9 297 64.6
Gorai.006G200500 Gossypium raimondii HOM05D000974 ORTHO05D007456 3.7e-102 375.6 298 64.1
Manes.06G157800 Manihot esculenta HOM05D000974 ORTHO05D007456 4.1e-101 372.1 297 64.0
Psat5g079560 Pisum sativum HOM05D000974 ORTHO05D007456 6.9e-101 371.3 302 63.6
Ciclev10005489m.g Citrus clementina HOM05D000974 ORTHO05D007456 5.9e-100 368.2 308 62.0
Potri.015G021100 Populus trichocarpa HOM05D000974 ORTHO05D007456 5.9e-100 368.2 297 63.3
Potri.015G021400 Populus trichocarpa HOM05D000974 ORTHO05D007456 1.0e-99 367.5 298 63.8
MD01G1215900 Malus domestica HOM05D000974 ORTHO05D007456 2.2e-99 366.3 311 60.1
FAN10G1776 Fragaria x ananassa HOM05D000974 ORTHO05D007456 3.8e-99 365.5 303 61.1
Dinv28331 Davidia involucrata HOM05D000974 ORTHO05D007456 1.1e-98 364.0 253 69.6
Potri.012G031000 Populus trichocarpa HOM05D000974 ORTHO05D007456 1.1e-98 364.0 298 61.4
vmacro06564 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 1.1e-98 364.0 336 57.7
GSVIVG01028702001 Vitis vinifera HOM05D000974 ORTHO05D007456 1.9e-98 363.2 297 61.6
Actinidia34202 Actinidia chinensis HOM05D000974 ORTHO05D007456 3.2e-98 362.5 296 63.9
FAN06G4709 Fragaria x ananassa HOM05D000974 ORTHO05D007456 4.2e-98 362.1 303 60.4
Nitab4.5_0005625g0010 Nicotiana tabacum HOM05D000974 ORTHO05D007456 4.2e-98 362.1 296 61.5
FAN03G2436 Fragaria x ananassa HOM05D000974 ORTHO05D006000 5.5e-98 361.7 300 61.3
EL10Ac3g05342 Beta vulgaris HOM05D000974 ORTHO05D007456 7.2e-98 361.3 308 62.0
FAN10G1818 Fragaria x ananassa HOM05D000974 ORTHO05D006000 9.4e-98 360.9 300 61.3
AUR62006147 Chenopodium quinoa HOM05D000974 ORTHO05D007456 1.6e-97 360.1 297 63.3
Nitab4.5_0002589g0050 Nicotiana tabacum HOM05D000974 ORTHO05D007456 1.6e-97 360.1 296 61.8
FvH4_7g31090 Fragaria vesca HOM05D000974 ORTHO05D007456 2.1e-97 359.8 303 60.1
FAN06G0673 Fragaria x ananassa HOM05D000974 ORTHO05D007456 2.1e-97 359.8 303 60.1
DCAR_020306 Daucus carota HOM05D000974 ORTHO05D007456 3.6e-97 359.0 298 61.7
Peaxi162Scf00904g00123 Petunia axillaris HOM05D000974 ORTHO05D007456 1.4e-96 357.1 296 60.5
CsaV3_5G000660 Cucumis sativus L. HOM05D000974 ORTHO05D007456 1.1e-95 354.0 298 60.7
RcHm_v2.0_Chr1g0380171 Rosa chinensis HOM05D000974 ORTHO05D007456 1.1e-95 354.0 299 61.2
Haze_00118 Corylus avellana HOM05D000974 ORTHO05D007456 1.5e-95 353.6 297 62.6
PGR142G2075 Punica granatum HOM05D000974 ORTHO05D007456 4.3e-95 352.1 305 59.7
CARHR189450 Cardamine hirsuta HOM05D000974 ORTHO05D007456 7.4e-95 351.3 316 59.2
Prupe.2G308000 Prunus persica HOM05D000974 ORTHO05D002201 9.7e-95 350.9 306 60.5
ClCG01G000560 Citrullus lanatus HOM05D000974 ORTHO05D007456 1.3e-94 350.5 298 60.4
CSS0027071 Camellia sinensis var. sinensis HOM05D000974 ORTHO05D007456 4.8e-94 348.6 305 59.3
Thhalv10005277m.g Eutrema salsugineum HOM05D000974 ORTHO05D007456 1.1e-93 347.4 315 57.5
PSO135G0499 Papaver somniferum HOM05D000974 ORTHO05D007456 6.9e-93 344.7 300 59.7
Cc02_g01830 Coffea canephora HOM05D000974 ORTHO05D007456 9.1e-93 344.4 297 59.6
Sabra12G0020600 Salix brachista HOM05D000974 ORTHO05D007456 1.5e-92 343.6 309 57.9
PSO384G1506 Papaver somniferum HOM05D000974 ORTHO05D007456 2.6e-92 342.8 300 59.3
Oeu060978.1 Olea europaea HOM05D000974 ORTHO05D007456 3.4e-92 342.4 296 60.8
BcaNung01212 Brassica carinata HOM05D000974 ORTHO05D007456 4.5e-92 342.0 314 58.3
Rhsim09G0204100 Rhododendron simsii HOM05D000974 ORTHO05D007456 5.9e-92 341.7 294 60.2
vmacro10108 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 5.9e-92 341.7 294 59.5
A06p34970 Brassica napus HOM05D000974 ORTHO05D007456 1.3e-91 340.5 315 58.1
BraA06t26421Z Brassica rapa HOM05D000974 ORTHO05D007456 1.3e-91 340.5 315 58.1
C07p43580 Brassica napus HOM05D000974 ORTHO05D007456 2.9e-91 339.3 315 57.8
BolC7t44885H Brassica oleracea HOM05D000974 ORTHO05D007456 2.9e-91 339.3 315 57.8
AL6G35490 Arabidopsis lyrata HOM05D000974 ORTHO05D007456 3.8e-91 339.0 317 56.8
AT5G24130 Arabidopsis thaliana HOM05D000974 ORTHO05D007456 8.5e-91 337.8 316 57.3
BcaNung01815 Brassica carinata HOM05D000974 ORTHO05D007456 8.5e-91 337.8 315 57.5
THA.LOC104821367 Tarenaya hassleriana HOM05D000974 ORTHO05D007456 1.1e-90 337.4 311 58.8
TAR636G3288 Trochodendron aralioides HOM05D000974 ORTHO05D007456 1.1e-90 337.4 299 59.5
CANSAT21G0519 Cannabis sativa HOM05D000974 ORTHO05D007456 1.4e-90 337.0 313 58.1
Migut.F00239 Erythranthe guttata HOM05D000974 ORTHO05D007456 1.9e-90 336.7 310 58.1
AUR62019342 Chenopodium quinoa HOM05D000974 ORTHO05D007456 5.5e-90 335.1 297 60.9
Aqoxy7G00132 Aquilegia oxysepala HOM05D000974 ORTHO05D007456 6.1e-89 331.6 303 59.1
Sed0023834 Sechium edule HOM05D000974 ORTHO05D007456 1.0e-88 330.9 298 56.4
Rhsim03G0199900 Rhododendron simsii HOM05D000974 ORTHO05D007456 1.4e-88 330.5 301 58.5
Sp2g23180 Schrenkiella parvula HOM05D000974 ORTHO05D007456 5.1e-88 328.6 316 57.0
Carub.0006s2186 Capsella rubella HOM05D000974 ORTHO05D007456 4.8e-86 322.0 314 57.0
Aa31LG11G3400 Aethionema arabicum HOM05D000974 ORTHO05D007456 8.2e-86 321.2 312 54.2
Cpa.g.sc34.147 Carica papaya HOM05D000974 ORTHO05D007456 3.1e-85 319.3 295 57.6
SalBow4G2102 Salvia bowleyana HOM05D000974 ORTHO05D007456 9.1e-85 317.8 304 56.2
Atru.chr1.258 Acer truncatum HOM05D000974 ORTHO05D007456 1.3e-83 313.9 303 56.4
SGA_v2.0_scaffold192G40573 Striga asiatica HOM05D000974 ORTHO05D007456 2.9e-83 312.8 308 55.8
Lj1A1013G39 Lonicera japonica HOM05D000974 ORTHO05D007456 8.5e-83 311.2 296 55.4
Lsat_1_v5_gn_9_57980 Lactuca sativa HOM05D000974 ORTHO05D007456 1.6e-81 307.0 300 55.3
Lsat_1_v5_gn_2_134181 Lactuca sativa HOM05D000974 ORTHO05D007456 5.7e-79 298.5 264 56.8
TAR375G0325 Trochodendron aralioides HOM05D000974 ORTHO05D007456 4.8e-78 295.4 301 55.1
ECA232G4254 Erigeron canadensis HOM05D000974 ORTHO05D007456 6.3e-78 295.0 308 53.6
HanXRQChr09g0253031 Helianthus annuus HOM05D000974 ORTHO05D007456 2.4e-77 293.1 290 54.1
HanXRQChr14g0462881 Helianthus annuus HOM05D000974 ORTHO05D007456 4.1e-77 292.4 257 57.6
Cfa016368 Carpinus fangiana HOM05D000974 ORTHO05D007456 1.2e-76 290.8 302 54.0
Duzib084G1361 Durio zibethinus HOM05D000974 ORTHO05D007456 4.5e-76 288.9 299 54.2
unitig_747.g21851 Utricularia gibba HOM05D000974 ORTHO05D007456 7.2e-74 281.6 266 54.1
MBI07_g34227_MAGBIO Magnolia biondii HOM05D000974 ORTHO05D007456 1.8e-72 276.9 298 51.3
Rhsim09G0204200 Rhododendron simsii HOM05D000974 ORTHO05D007456 2.3e-72 276.6 259 52.9
HPP92_005207 Vanilla planifolia HOM05D000974 ORTHO05D007456 8.8e-72 274.6 317 49.8
Lj3A909T48 Lonicera japonica HOM05D000974 ORTHO05D007456 2.6e-71 273.1 273 53.8
SalBow4G1511 Salvia bowleyana HOM05D000974 ORTHO05D007456 7.5e-71 271.6 304 50.0
DCAR_014533 Daucus carota HOM05D000974 ORTHO05D007456 1.7e-70 270.4 298 54.0
Potri.015G021300 Populus trichocarpa HOM05D000974 ORTHO05D007456 5.9e-68 261.9 205 63.9
Nn1g01835 Nelumbo nucifera HOM05D000974 ORTHO05D007456 9.4e-66 254.6 300 50.7
Oeu060979.1 Olea europaea HOM05D000974 ORTHO05D007456 3.4e-63 246.1 203 62.6
Zm00001eb238160 Zea mays HOM05D000974 ORTHO05D007456 3.4e-63 246.1 306 47.1
QL09p010742 Quercus lobata HOM05D000974 ORTHO05D007456 2.3e-59 233.4 265 51.3
CDE10G0850 Ceratophyllum demersum HOM05D000974 ORTHO05D007456 6.6e-59 231.9 301 45.8
ECA238G2040 Erigeron canadensis HOM05D005084 ORTHO05D006254 5.4e-53 212.2 232 49.1
Sopen03g003300 Solanum pennellii HOM05D000974 ORTHO05D007456 2.2e-46 190.3 186 53.8
Os02g0257200 Oryza sativa ssp. japonica HOM05D000974 ORTHO05D007456 1.6e-44 184.1 302 40.1
Zm00001eb345000 Zea mays HOM05D000974 ORTHO05D007456 1.6e-44 184.1 262 42.4
AagrBONN_evm.TU.Sc2ySwM_117.3541 Anthoceros agrestis HOM05D000974 ORTHO05D007456 4.6e-44 182.6 268 40.7
PGSC0003DMG400009074 Solanum tuberosum HOM05D000974 ORTHO05D007456 1.0e-43 181.4 206 48.1
Os05g0586700 Oryza sativa ssp. japonica HOM05D000974 ORTHO05D007456 6.6e-43 178.7 295 37.6
CiPaw.05G257400 Carya illinoinensis HOM05D000974 ORTHO05D007456 2.1e-41 173.7 134 65.7
Lalb_Chr08g0240561 Lupinus albus HOM05D000974 ORTHO05D007456 2.2e-38 163.7 119 71.4
Mapoly0123s0011 Marchantia polymorpha HOM05D000974 ORTHO05D007456 5.4e-37 159.1 263 35.7
SMO347G0394 Selaginella moellendorffii HOM05D000974 ORTHO05D007456 8.6e-35 151.8 264 36.4
Lalb_Chr08g0240551 Lupinus albus HOM05D000974 ORTHO05D007456 3.3e-34 149.8 123 61.0
CiPaw.05G257300 Carya illinoinensis HOM05D000974 ORTHO05D007456 1.2e-33 147.9 133 57.9
Pp3c2_19140 Physcomitrium patens HOM05D000974 ORTHO05D007456 1.6e-33 147.5 269 36.8
MBI07_g45742_MAGBIO Magnolia biondii HOM05D000974 ORTHO05D007456 1.1e-32 144.8 298 34.2
Hma1.2p1_1655F.1_g295980 Hydrangea macrophylla HOM05D000974 ORTHO05D007456 9.9e-31 138.3 182 44.0
Oeu060977.1 Olea europaea HOM05D000974 ORTHO05D007456 1.7e-30 137.5 119 60.5
Lalb_Chr08g0240541 Lupinus albus HOM05D000974 ORTHO05D007456 2.2e-30 137.1 97 68.0
Rhsim02G0197500 Rhododendron simsii HOM05D000974 ORTHO05D007456 9.2e-29 131.7 224 39.7
Rhsim04G0082700 Rhododendron simsii HOM05D000974 ORTHO05D007456 2.7e-28 130.2 205 39.5
FAN01G0307 Fragaria x ananassa HOM05D000974 ORTHO05D007456 7.3e-26 122.1 303 31.7
Actinidia08630 Actinidia chinensis HOM05D000974 ORTHO05D007456 4.0e-24 116.3 109 57.8
ATR0589G055 Amborella trichopoda HOM05D000974 ORTHO05D007456 2.6e-23 113.6 120 51.7
CDE10G0750 Ceratophyllum demersum HOM05D000974 ORTHO05D007456 9.9e-23 111.7 125 48.0
vmacro10109 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 8.4e-22 108.6 149 41.6
Atru.chr1.262 Acer truncatum HOM05D000974 ORTHO05D007456 1.1e-21 108.2 102 55.9
TAR629G1462 Trochodendron aralioides HOM05D000974 ORTHO05D007456 9.3e-21 105.1 105 53.3
Pp3c3_31670 Physcomitrium patens HOM05D000974 ORTHO05D007456 7.3e-18 95.5 158 37.3
ATR0589G008 Amborella trichopoda HOM05D000974 ORTHO05D007456 9.9e-15 85.1 100 52.0
COL.COLO4_02792 Corchorus olitorius HOM05D000974 ORTHO05D007456 4.5e-07 59.7 66 50.0
Nn3g19050 Nelumbo nucifera HOM05D000974 ORTHO05D007456 4.9e-06 56.2 92 35.9
DCAR_022594 Daucus carota HOM05D000974 ORTHO05D007456 6.4e-06 55.8 66 50.0


User provided reference genes

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