Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.CZMF37 Arachis hypogaea HOM05D007037 ORTHO05D006691 2.0e-46 188.7 96 100.0
arahy.Tifrunner.gnm1.ann1.98H95S Arachis hypogaea HOM05D007037 ORTHO05D006691 1.6e-38 162.5 87 97.7
Medtr2g023440 Medicago truncatula HOM05D007037 ORTHO05D006691 1.5e-12 76.3 81 56.8
TPR.G13436 Trifolium pratense HOM05D007037 ORTHO05D006691 8.1e-11 70.5 81 53.1
TAR624G1029 Trochodendron aralioides HOM05D007037 ORTHO05D006691 2.4e-10 68.9 84 46.4
Glyma.09G004000 Glycine max HOM05D007037 ORTHO05D006691 3.1e-10 68.6 87 52.9
QL05p073032 Quercus lobata HOM05D007037 ORTHO05D006691 5.2e-10 67.8 79 48.1
Thecc.06G221700 Theobroma cacao HOM05D007037 ORTHO05D006691 5.2e-10 67.8 81 44.4
CiPaw.09G092600 Carya illinoinensis HOM05D007037 ORTHO05D006691 6.8e-10 67.4 81 44.4
DCAR_008156 Daucus carota HOM05D007037 ORTHO05D006691 2.0e-09 65.9 84 45.2
Duzib192G0147 Durio zibethinus HOM05D007037 ORTHO05D006691 3.4e-09 65.1 86 44.2
Atru.chr10.2236 Acer truncatum HOM05D007037 ORTHO05D006691 5.8e-09 64.3 76 47.4
Manes.16G006400 Manihot esculenta HOM05D007037 ORTHO05D006691 4.9e-08 61.2 81 44.4
CSS0006945 Camellia sinensis var. sinensis HOM05D007037 ORTHO05D006691 6.4e-08 60.8 78 46.2
Eucgr.E04050 Eucalyptus grandis HOM05D007037 ORTHO05D006691 6.4e-08 60.8 87 46.0
Oeu025269.1 Olea europaea HOM05D007037 ORTHO05D006691 6.4e-08 60.8 79 40.5
Prupe.4G019700 Prunus persica HOM05D007037 ORTHO05D006691 6.4e-08 60.8 79 46.8
Lj6g0006723 Lotus japonicus HOM05D007037 ORTHO05D006691 8.4e-08 60.5 81 54.3
Nitab4.5_0005074g0010 Nicotiana tabacum HOM05D007037 ORTHO05D006691 8.4e-08 60.5 79 41.8
MD05G1347800 Malus domestica HOM05D007037 ORTHO05D006691 1.1e-07 60.1 79 48.1
RcHm_v2.0_Chr5g0002881 Rosa chinensis HOM05D007037 ORTHO05D006691 1.1e-07 60.1 87 41.4
Dinv13899 Davidia involucrata HOM05D001191 ORTHO05D000979 1.4e-07 59.7 89 40.4
FAN21G2981 Fragaria x ananassa HOM05D001191 ORTHO05D000979 1.4e-07 59.7 87 41.4
FAN25G2740 Fragaria x ananassa HOM05D007037 ORTHO05D006691 1.4e-07 59.7 87 44.8
Glyma.17G012900 Glycine max HOM05D007037 ORTHO05D006691 1.9e-07 59.3 87 47.1
MD10G1322200 Malus domestica HOM05D007037 ORTHO05D006691 1.9e-07 59.3 79 45.6
Cc09_g01610 Coffea canephora HOM05D007037 ORTHO05D006691 2.4e-07 58.9 79 41.8
Manes.01G159201 Manihot esculenta HOM05D007037 ORTHO05D006691 2.4e-07 58.9 81 43.2
Nitab4.5_0009030g0010 Nicotiana tabacum HOM05D007037 ORTHO05D006691 2.4e-07 58.9 79 40.5
Hma1.2p1_0749F.1_g212630 Hydrangea macrophylla HOM05D007037 ORTHO05D006691 3.2e-07 58.5 85 43.5
Hma1.2p1_0749F.1_g212635 Hydrangea macrophylla HOM05D007037 ORTHO05D006691 3.2e-07 58.5 85 43.5
Potri.011G004400 Populus trichocarpa HOM05D007037 ORTHO05D006691 3.2e-07 58.5 82 41.5
Nitab4.5_0000005g0340 Nicotiana tabacum HOM05D007037 ORTHO05D006691 4.2e-07 58.2 79 40.5
Gohir.A05G170900 Gossypium hirsutum HOM05D007037 ORTHO05D006691 5.4e-07 57.8 87 42.5
Nitab4.5_0002827g0030 Nicotiana tabacum HOM05D007037 ORTHO05D006691 7.1e-07 57.4 79 39.2
Potri.004G013601 Populus trichocarpa HOM05D007037 ORTHO05D006691 7.1e-07 57.4 82 43.9
COL.COLO4_00342 Corchorus olitorius HOM05D007037 ORTHO05D006691 9.3e-07 57.0 87 41.4
Phvul.003G079400 Phaseolus vulgaris HOM05D007037 ORTHO05D006691 9.3e-07 57.0 87 49.4
PGSC0003DMG400016450 Solanum tuberosum HOM05D007037 ORTHO05D006691 9.3e-07 57.0 79 39.2
CSS0026389 Camellia sinensis var. sinensis HOM05D007037 ORTHO05D006691 2.1e-06 55.8 76 46.1
Glyma.07G261100 Glycine max HOM05D007037 ORTHO05D006691 4.6e-06 54.7 87 42.5
vmacro23211 Vaccinium macrocarpon HOM05D007037 ORTHO05D006691 4.6e-06 54.7 76 39.5
Sopen02g025300 Solanum pennellii HOM05D007037 ORTHO05D006691 6.0e-06 54.3 79 38.0


User provided reference genes

Program Settings