Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.CWA5R2 Arachis hypogaea HOM05D006169 ORTHO05D007698 8.2e-51 203.4 98 100.0
arahy.Tifrunner.gnm1.ann1.Z5NCG3 Arachis hypogaea HOM05D006169 ORTHO05D007698 5.0e-32 141.0 98 76.5
arahy.Tifrunner.gnm1.ann1.W0CMT4 Arachis hypogaea HOM05D006169 ORTHO05D007698 8.8e-29 130.2 61 98.4
Sabra13G0011000 Salix brachista HOM05D006169 ORTHO05D007698 1.5e-25 119.4 89 70.8
arahy.Tifrunner.gnm1.ann1.NVQ69B Arachis hypogaea HOM05D006169 ORTHO05D007698 2.0e-25 119.0 58 94.8
arahy.Tifrunner.gnm1.ann1.X8FEVW Arachis hypogaea HOM05D006169 ORTHO05D007698 2.0e-25 119.0 58 94.8
Ca_10150_v3 Cicer arietinum L. HOM05D006169 ORTHO05D007698 2.0e-25 119.0 58 94.8
Medtr1g083600 Medicago truncatula HOM05D006169 ORTHO05D007698 2.0e-25 119.0 58 94.8
Cc02_g34500 Coffea canephora HOM05D006169 ORTHO05D007698 4.5e-25 117.9 58 93.1
Lalb_Chr06g0167751 Lupinus albus HOM05D006169 ORTHO05D007698 4.5e-25 117.9 58 93.1
AUR62000726 Chenopodium quinoa HOM05D006169 ORTHO05D007698 5.9e-25 117.5 58 93.1
AUR62005238 Chenopodium quinoa HOM05D006169 ORTHO05D007698 5.9e-25 117.5 58 93.1
Manes.08G114800 Manihot esculenta HOM05D006169 ORTHO05D007698 5.9e-25 117.5 58 93.1
DCAR_029375 Daucus carota HOM05D006169 ORTHO05D007698 7.7e-25 117.1 58 91.4
Lj5g0023338 Lotus japonicus HOM05D006169 ORTHO05D007698 7.7e-25 117.1 58 93.1
TPR.G17714 Trifolium pratense HOM05D006169 ORTHO05D007698 7.7e-25 117.1 58 91.4
Peaxi162Scf00484g00066 Petunia axillaris HOM05D006169 ORTHO05D007698 1.0e-24 116.7 58 91.4
Psat6g151520 Pisum sativum HOM05D006169 ORTHO05D007698 1.0e-24 116.7 58 91.4
Actinidia02688 Actinidia chinensis HOM05D006169 ORTHO05D007698 1.3e-24 116.3 58 91.4
MELO3C004212.2 Cucumis melo HOM05D006169 ORTHO05D007698 1.3e-24 116.3 58 91.4
CsaV3_2G006780 Cucumis sativus L. HOM05D006169 ORTHO05D007698 1.3e-24 116.3 58 91.4
Rhsim05G0136600 Rhododendron simsii HOM05D006169 ORTHO05D007698 1.3e-24 116.3 58 91.4
Aqoxy5G00801 Aquilegia oxysepala HOM05D006169 ORTHO05D007698 1.7e-24 115.9 58 91.4
Hund07115 Selenicereus undatus HOM05D006169 ORTHO05D007698 1.7e-24 115.9 59 88.1
Eucgr.H03261 Eucalyptus grandis HOM05D006169 ORTHO05D007698 2.2e-24 115.5 58 89.7
Eucgr.L02153 Eucalyptus grandis HOM05D006169 ORTHO05D007698 2.2e-24 115.5 58 89.7
Cfa006660 Carpinus fangiana HOM05D006169 ORTHO05D007698 2.9e-24 115.2 59 89.8
Nitab4.5_0001266g0050 Nicotiana tabacum HOM05D006169 ORTHO05D007698 2.9e-24 115.2 58 91.4
Hma1.2p1_1441F.1_g283670 Hydrangea macrophylla HOM05D006169 ORTHO05D007698 3.8e-24 114.8 58 89.7
Hma1.2p1_1441F.1_g283680 Hydrangea macrophylla HOM05D006169 ORTHO05D007698 3.8e-24 114.8 58 89.7
SalBow3G0569 Salvia bowleyana HOM05D006169 ORTHO05D007698 3.8e-24 114.8 58 89.7
GSVIVG01031157001 Vitis vinifera HOM05D006169 ORTHO05D007698 3.8e-24 114.8 58 89.7
arahy.Tifrunner.gnm1.ann1.91HID7 Arachis hypogaea HOM05D006169 ORTHO05D007698 5.0e-24 114.4 57 93.0
CAN.G813.8 Capsicum annuum HOM05D006169 ORTHO05D007698 5.0e-24 114.4 58 91.4
ClCG00G004550 Citrullus lanatus HOM05D006169 ORTHO05D007698 5.0e-24 114.4 58 87.9
ClCG02G015230 Citrullus lanatus HOM05D006169 ORTHO05D007698 5.0e-24 114.4 58 87.9
Lj9C200T3 Lonicera japonica HOM05D006169 ORTHO05D007698 5.0e-24 114.4 57 91.2
Potri.013G012400 Populus trichocarpa HOM05D006169 ORTHO05D007698 5.0e-24 114.4 58 87.9
THA.LOC104802790 Tarenaya hassleriana HOM05D006169 ORTHO05D007698 5.0e-24 114.4 58 89.7
FAN05G4461 Fragaria x ananassa HOM05D006169 ORTHO05D007698 6.5e-24 114.0 61 85.2
SGA_v2.0_scaffold81G26108 Striga asiatica HOM05D006169 ORTHO05D007698 6.5e-24 114.0 58 89.7
Nn3g21567 Nelumbo nucifera HOM05D006169 ORTHO05D007698 8.5e-24 113.6 58 89.7
Oeu048884.1 Olea europaea HOM05D006169 ORTHO05D007698 8.5e-24 113.6 58 87.9
Ah.04g161300 Amaranthus hybridus HOM05D006169 ORTHO05D007698 1.1e-23 113.2 59 86.4
Glyma.10G150300 Glycine max HOM05D006169 ORTHO05D007698 1.1e-23 113.2 58 89.7
QL03p019145 Quercus lobata HOM05D006169 ORTHO05D007698 1.1e-23 113.2 58 89.7
FvH4_6g06920 Fragaria vesca HOM05D006169 ORTHO05D007698 1.5e-23 112.8 68 77.9
MD04G1197600 Malus domestica HOM05D006169 ORTHO05D007698 1.5e-23 112.8 58 87.9
CANSAT54G3053 Cannabis sativa HOM05D006169 ORTHO05D007698 1.9e-23 112.5 58 87.9
FAN14G4015 Fragaria x ananassa HOM05D006169 ORTHO05D007698 1.9e-23 112.5 58 87.9
Lsat_1_v5_gn_7_73300 Lactuca sativa HOM05D006169 ORTHO05D007698 1.9e-23 112.5 58 87.9
RcHm_v2.0_Chr3g0456451 Rosa chinensis HOM05D006169 ORTHO05D007698 1.9e-23 112.5 58 87.9
Solyc10g044710.2 Solanum lycopersicum HOM05D006169 ORTHO05D007698 1.9e-23 112.5 58 87.9
Sopen10g013390 Solanum pennellii HOM05D006169 ORTHO05D007698 1.9e-23 112.5 58 87.9
Zm00001eb340780 Zea mays HOM05D006169 ORTHO05D007698 1.9e-23 112.5 60 85.0
CiPaw.08G158800 Carya illinoinensis HOM05D006169 ORTHO05D007698 2.5e-23 112.1 58 86.2
Prupe.6G318000 Prunus persica HOM05D006169 ORTHO05D007698 2.5e-23 112.1 58 87.9
Dinv24403 Davidia involucrata HOM05D006169 ORTHO05D007698 3.2e-23 111.7 58 87.9
Duzib177G0247 Durio zibethinus HOM05D006169 ORTHO05D007698 3.2e-23 111.7 58 87.9
Gohir.A11G270300 Gossypium hirsutum HOM05D006169 ORTHO05D007698 3.2e-23 111.7 58 86.2
Gohir.D11G280500 Gossypium hirsutum HOM05D006169 ORTHO05D007698 3.2e-23 111.7 58 86.2
Gorai.007G302700 Gossypium raimondii HOM05D006169 ORTHO05D007698 3.2e-23 111.7 58 86.2
CDE05G1145 Ceratophyllum demersum HOM05D006169 ORTHO05D007698 4.2e-23 111.3 58 84.5
Haze_04109 Corylus avellana HOM05D006169 ORTHO05D007698 4.2e-23 111.3 58 87.9
Ciclev10001820m.g Citrus clementina HOM05D006169 ORTHO05D007698 5.5e-23 110.9 58 86.2
COL.COLO4_10563 Corchorus olitorius HOM05D006169 ORTHO05D007698 5.5e-23 110.9 58 86.2
Eucgr.H04522 Eucalyptus grandis HOM05D006169 ORTHO05D007698 5.5e-23 110.9 58 86.2
HanXRQChr06g0182151 Helianthus annuus HOM05D006169 ORTHO05D007698 5.5e-23 110.9 58 86.2
PSO210G0761 Papaver somniferum HOM05D006169 ORTHO05D007698 5.5e-23 110.9 58 86.2
PSO832G1922 Papaver somniferum HOM05D006169 ORTHO05D007698 5.5e-23 110.9 58 86.2
Sed0028110 Sechium edule HOM05D006169 ORTHO05D007698 5.5e-23 110.9 58 87.9
ECA236G4200 Erigeron canadensis HOM05D006169 ORTHO05D007698 7.2e-23 110.5 58 86.2
Phvul.007G198500 Phaseolus vulgaris HOM05D006169 ORTHO05D007698 7.2e-23 110.5 58 86.2
Cpa.g.sc48.120 Carica papaya HOM05D006169 ORTHO05D007698 9.4e-23 110.2 54 92.6
Migut.N02103 Erythranthe guttata HOM05D006169 ORTHO05D007698 9.4e-23 110.2 58 84.5
PGR031G2380 Punica granatum HOM05D006169 ORTHO05D007698 9.4e-23 110.2 58 86.2
Thecc.05G316900 Theobroma cacao HOM05D006169 ORTHO05D007698 1.2e-22 109.8 58 86.2
TWI56G0200 Tripterygium wilfordii HOM05D006169 ORTHO05D007698 1.2e-22 109.8 58 86.2
Thhalv10021364m.g Eutrema salsugineum HOM05D006169 ORTHO05D007698 1.6e-22 109.4 58 84.5
BcaB04g19252 Brassica carinata HOM05D006169 ORTHO05D007698 2.1e-22 109.0 58 84.5
A03p34240 Brassica napus HOM05D006169 ORTHO05D007698 2.1e-22 109.0 58 84.5
C03p41640 Brassica napus HOM05D006169 ORTHO05D007698 2.1e-22 109.0 58 84.5
BraA03t12598Z Brassica rapa HOM05D006169 ORTHO05D007698 2.1e-22 109.0 58 84.5
Carub.0003s0495 Capsella rubella HOM05D006169 ORTHO05D007698 2.1e-22 109.0 58 84.5
CARHR080070 Cardamine hirsuta HOM05D006169 ORTHO05D007698 2.1e-22 109.0 58 84.5
Sc14g0006600 Simmondsia chinensis HOM05D006169 ORTHO05D007698 2.7e-22 108.6 58 82.8
Sp3g04510 Schrenkiella parvula HOM05D006169 ORTHO05D007698 3.6e-22 108.2 58 84.5
BcaB04g19251 Brassica carinata HOM05D006169 ORTHO05D007698 4.7e-22 107.8 58 84.5
FAN09G1827 Fragaria x ananassa HOM05D006169 ORTHO05D007698 4.7e-22 107.8 54 90.7
Atru.chr5.1841 Acer truncatum HOM05D006169 ORTHO05D007698 8.0e-22 107.1 58 84.5
AL3G16270 Arabidopsis lyrata HOM05D006169 ORTHO05D007698 8.0e-22 107.1 58 81.0
BolC3t16445H Brassica oleracea HOM05D006169 ORTHO05D007698 8.0e-22 107.1 58 82.8
HPP92_016950 Vanilla planifolia HOM05D006169 ORTHO05D007698 8.0e-22 107.1 58 82.8
SEGI_23594 Sequoiadendron giganteum HOM05D006169 ORTHO05D007698 1.4e-21 106.3 58 82.8
HPP92_016954 Vanilla planifolia HOM05D006169 ORTHO05D007698 2.3e-21 105.5 58 81.0
AT3G05625 Arabidopsis thaliana HOM05D006169 ORTHO05D007698 4.0e-21 104.8 58 79.3
ATR0693G261 Amborella trichopoda HOM05D006169 ORTHO05D007698 1.5e-20 102.8 59 79.7
Pp3c1_33190 Physcomitrium patens HOM05D006169 ORTHO05D007698 1.5e-20 102.8 58 81.0
arahy.Tifrunner.gnm1.ann1.C5NY6B Arachis hypogaea HOM05D006169 ORTHO05D007698 5.7e-20 100.9 61 78.7
Aa31LG5G16050 Aethionema arabicum HOM05D006169 ORTHO05D007698 2.2e-19 99.0 67 71.6
AagrBONN_evm.TU.Sc2ySwM_344.2014 Anthoceros agrestis HOM05D006169 ORTHO05D007698 2.2e-19 99.0 58 75.9
EL10Ac4g09881 Beta vulgaris HOM05D006169 ORTHO05D007698 2.2e-19 99.0 48 93.8
MBI18_g25080_MAGBIO Magnolia biondii HOM05D006169 ORTHO05D007698 8.2e-19 97.1 48 91.7
Mapoly0065s0090 Marchantia polymorpha HOM05D006169 ORTHO05D007698 1.4e-18 96.3 82 58.5
Cre12.g508350 Chlamydomonas reinhardtii HOM05D006169 ORTHO05D007698 1.8e-18 95.9 83 60.2
CDE11G0042 Ceratophyllum demersum HOM05D006169 ORTHO05D007698 5.3e-18 94.4 89 52.8
CBR_g8203 Chara braunii HOM05D006169 ORTHO05D007698 3.5e-17 91.7 58 70.7
Nitab4.5_0000005g0540 Nicotiana tabacum HOM05D006169 ORTHO05D007698 7.7e-17 90.5 56 76.8
unitig_0.g2320 Utricularia gibba HOM05D006169 ORTHO05D007698 7.7e-17 90.5 48 83.3
Actinidia19770 Actinidia chinensis HOM05D006169 ORTHO05D007698 1.0e-16 90.1 55 76.4
Glyma.20G237950 Glycine max HOM05D006169 ORTHO05D007698 5.0e-16 87.8 46 87.0
RcHm_v2.0_Chr1g0332671 Rosa chinensis HOM05D006169 ORTHO05D007698 1.5e-15 86.3 46 82.6
BcaB04g19253 Brassica carinata HOM05D006169 ORTHO05D007698 1.9e-15 85.9 51 74.5
PGSC0003DMG400043741 Solanum tuberosum HOM05D006169 ORTHO05D007698 3.2e-15 85.1 46 80.4
arahy.Tifrunner.gnm1.ann1.4I5A07 Arachis hypogaea HOM05D000158 ORTHO05D003614 9.4e-15 83.6 45 84.4
SMO358G0244 Selaginella moellendorffii HOM05D006169 ORTHO05D007698 8.0e-14 80.5 54 64.8
arahy.Tifrunner.gnm1.ann1.GNZ56J Arachis hypogaea HOM05D006169 ORTHO05D007698 3.0e-13 78.6 44 79.5
arahy.Tifrunner.gnm1.ann1.7P5A0X Arachis hypogaea HOM05D006169 ORTHO05D082911 3.4e-12 75.1 38 97.4
MCO01G635 Micromonas commoda HOM05D006169 ORTHO05D007698 3.4e-12 75.1 84 48.8
PRCOL_00000586 Prasinoderma coloniale HOM05D006169 ORTHO05D007698 1.3e-08 63.2 54 53.7


User provided reference genes

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