Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.CV40CV Arachis hypogaea HOM05D001966 ORTHO05D010127 8.8e-119 430.3 210 100.0
Nitab4.5_0003644g0040 Nicotiana tabacum HOM05D001966 ORTHO05D010127 4.9e-93 344.7 209 81.3
arahy.Tifrunner.gnm1.ann1.H5WC3R Arachis hypogaea HOM05D001966 ORTHO05D011119 8.9e-63 244.2 216 63.0
arahy.Tifrunner.gnm1.ann1.MHEL4J Arachis hypogaea HOM05D001966 ORTHO05D011119 1.7e-53 213.4 171 68.4
arahy.Tifrunner.gnm1.ann1.2KV113 Arachis hypogaea HOM05D000580 ORTHO05D011119 8.4e-53 211.1 116 90.5
FAN13G1592 Fragaria x ananassa HOM05D001966 ORTHO05D010127 1.6e-51 206.8 119 85.7
Oeu012760.1 Olea europaea HOM05D001966 ORTHO05D010127 8.7e-50 201.1 209 56.5
Oeu022559.1 Olea europaea HOM05D001966 ORTHO05D011119 2.6e-46 189.5 199 54.8
Peaxi162Scf01071g00036 Petunia axillaris HOM05D001966 ORTHO05D010127 6.4e-45 184.9 121 79.3
ClCG02G009760 Citrullus lanatus HOM05D001966 ORTHO05D000002 3.0e-42 176.0 119 78.2
arahy.Tifrunner.gnm1.ann1.KT8FLV Arachis hypogaea HOM05D001966 ORTHO05D011119 2.8e-40 169.5 90 91.1
arahy.Tifrunner.gnm1.ann1.UVG9XA Arachis hypogaea HOM05D001966 ORTHO05D010127 8.1e-40 167.9 96 81.2
arahy.Tifrunner.gnm1.ann1.SGU002 Arachis hypogaea HOM05D000213 ORTHO05D000426 1.4e-39 167.2 124 71.0
arahy.Tifrunner.gnm1.ann1.1DF8CR Arachis hypogaea HOM05D001966 ORTHO05D011119 1.8e-39 166.8 85 94.1
Sopen09g027020 Solanum pennellii HOM05D001966 ORTHO05D011119 3.8e-37 159.1 79 96.2
arahy.Tifrunner.gnm1.ann1.9XT8BN Arachis hypogaea HOM05D001966 ORTHO05D010127 4.2e-36 155.6 210 49.5
Sopen02g002730 Solanum pennellii HOM05D004182 ORTHO05D007321 9.3e-36 154.5 202 46.5
Cfa023003 Carpinus fangiana HOM05D001966 ORTHO05D011119 2.7e-35 152.9 76 96.1
Sc05g0004140 Simmondsia chinensis HOM05D001966 ORTHO05D011119 7.9e-35 151.4 77 93.5
Gohir.D02G156751 Gossypium hirsutum HOM05D001966 ORTHO05D011119 3.7e-32 142.5 76 89.5
Sc05g0004050 Simmondsia chinensis HOM05D001966 ORTHO05D007227 3.7e-32 142.5 76 88.2
SEGI_24666 Sequoiadendron giganteum HOM05D001966 ORTHO05D011119 6.2e-32 141.7 90 82.2
Peaxi162Scf00263g00168 Petunia axillaris HOM05D001966 ORTHO05D010127 1.8e-31 140.2 194 49.0
Gorai.005G175800 Gossypium raimondii HOM05D001966 ORTHO05D011119 2.4e-31 139.8 76 88.2
SEGI_31611 Sequoiadendron giganteum HOM05D001966 ORTHO05D011119 4.1e-31 139.0 76 90.8
arahy.Tifrunner.gnm1.ann1.KXW2A6 Arachis hypogaea HOM05D001966 ORTHO05D011119 1.2e-30 137.5 68 97.1
Gohir.1Z050082 Gossypium hirsutum HOM05D001966 ORTHO05D010127 1.2e-30 137.5 72 88.9
Gohir.A04G039225 Gossypium hirsutum HOM05D001966 ORTHO05D010127 1.2e-30 137.5 72 88.9
Lsat_1_v5_gn_6_14541 Lactuca sativa HOM05D001966 ORTHO05D010127 1.5e-30 137.1 119 63.0
CDE02G3054 Ceratophyllum demersum HOM05D001966 ORTHO05D011119 1.3e-29 134.0 65 96.9
Gohir.A01G139755 Gossypium hirsutum HOM05D001966 ORTHO05D010127 6.5e-29 131.7 72 84.7
Gohir.1Z049792 Gossypium hirsutum HOM05D001966 ORTHO05D010127 2.5e-28 129.8 68 88.2
arahy.Tifrunner.gnm1.ann1.WY6BZE Arachis hypogaea HOM05D004182 ORTHO05D010127 2.1e-27 126.7 138 55.1
Gohir.A06G123204 Gossypium hirsutum HOM05D001966 ORTHO05D010127 2.1e-27 126.7 72 81.9
Sopen11g020180 Solanum pennellii HOM05D001966 ORTHO05D010127 1.8e-26 123.6 72 79.2
Gohir.D01G134240 Gossypium hirsutum HOM05D001966 ORTHO05D010127 1.1e-25 120.9 72 79.2
Nitab4.5_0001577g0040 Nicotiana tabacum HOM05D001966 ORTHO05D010127 1.6e-24 117.1 69 82.6
Gorai.002G166100 Gossypium raimondii HOM05D001966 ORTHO05D010127 2.8e-24 116.3 72 76.4
Oeu008622.1 Olea europaea HOM05D000866 ORTHO05D000673 4.1e-23 112.5 115 60.0
BolSC46t60966H Brassica oleracea HOM05D004182 ORTHO05D007321 5.3e-23 112.1 105 64.8
Migut.B01248 Erythranthe guttata HOM05D001966 ORTHO05D011119 4.5e-22 109.0 71 77.5
Nitab4.5_0012517g0030 Nicotiana tabacum HOM05D004182 ORTHO05D010127 1.3e-21 107.5 59 88.1
arahy.Tifrunner.gnm1.ann1.71HDHZ Arachis hypogaea HOM05D001966 ORTHO05D010127 2.9e-21 106.3 61 78.7
Gorai.007G326200 Gossypium raimondii HOM05D001966 ORTHO05D010127 2.9e-21 106.3 63 79.4
Gorai.011G180000 Gossypium raimondii HOM05D001966 ORTHO05D010127 2.9e-21 106.3 72 72.2
Medtr2g006030 Medicago truncatula HOM05D001966 ORTHO05D021579 3.8e-21 105.9 73 76.7
Gorai.007G150800 Gossypium raimondii HOM05D001966 ORTHO05D010127 5.0e-21 105.5 61 82.0
Gohir.D11G306003 Gossypium hirsutum HOM05D001966 ORTHO05D010127 6.5e-21 105.1 63 79.4
Nitab4.5_0007400g0080 Nicotiana tabacum HOM05D001966 ORTHO05D010127 7.2e-20 101.7 81 70.4
Cpa.g.sc120.41 Carica papaya HOM05D001966 ORTHO05D010127 9.4e-20 101.3 61 78.7
arahy.Tifrunner.gnm1.ann1.FF8QKQ Arachis hypogaea HOM05D001966 ORTHO05D011119 2.7e-19 99.8 50 96.0
BcaNung07086 Brassica carinata HOM05D001966 ORTHO05D011119 2.7e-19 99.8 50 96.0
Gohir.1Z049692 Gossypium hirsutum HOM05D001966 ORTHO05D011119 2.7e-19 99.8 50 96.0
Gohir.1Z050866 Gossypium hirsutum HOM05D001966 ORTHO05D011119 2.7e-19 99.8 50 96.0
ScUNg0000270 Simmondsia chinensis HOM05D001966 ORTHO05D011119 2.7e-19 99.8 50 96.0
VMungo0464G1082 Vigna mungo HOM05D006487 ORTHO05D007982 2.7e-19 99.8 50 96.0
Gohir.D11G140550 Gossypium hirsutum HOM05D001966 ORTHO05D010127 3.6e-19 99.4 61 78.7
Hma1.2p1_0594F.1_g185818 Hydrangea macrophylla HOM05D001966 ORTHO05D021579 1.4e-18 97.4 100 59.0
Hma1.2p1_0051F.1_g029255 Hydrangea macrophylla HOM05D001966 ORTHO05D011119 1.8e-18 97.1 50 94.0
Gohir.A01G119800 Gossypium hirsutum HOM05D001966 ORTHO05D011119 2.3e-18 96.7 50 94.0
Gorai.007G237900 Gossypium raimondii HOM05D001966 ORTHO05D011119 8.8e-18 94.7 50 92.0
Potri.011G074067 Populus trichocarpa HOM05D001966 ORTHO05D011119 1.1e-17 94.4 50 92.0
BolSC29t60554H Brassica oleracea HOM05D004182 ORTHO05D007321 1.5e-17 94.0 105 54.3
BolSC35t60712H Brassica oleracea HOM05D004182 ORTHO05D007321 1.5e-17 94.0 105 54.3
Gohir.A10G178000 Gossypium hirsutum HOM05D001966 ORTHO05D011119 2.0e-17 93.6 49 91.8
Solyc00g500196.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 9.7e-17 91.3 49 91.8
Cpa.g.sc37.79 Carica papaya HOM05D004182 ORTHO05D010127 1.3e-16 90.9 48 91.7
Phvul.001G037800 Phaseolus vulgaris HOM05D001966 ORTHO05D011119 1.3e-16 90.9 50 88.0
Sc09g0006250 Simmondsia chinensis HOM05D002578 ORTHO05D005154 1.3e-16 90.9 63 74.6
BcaNung07085 Brassica carinata HOM05D001966 ORTHO05D010449 1.7e-16 90.5 48 91.7
Hma1.2p1_0421F.1_g149830 Hydrangea macrophylla HOM05D001966 ORTHO05D021579 2.8e-16 89.7 69 72.5
VMungo0942G0003 Vigna mungo HOM05D004182 ORTHO05D007321 2.8e-16 89.7 50 88.0
Sopen02g009080 Solanum pennellii HOM05D004182 ORTHO05D007321 1.1e-15 87.8 48 89.6
arahy.Tifrunner.gnm1.ann1.U90T8C Arachis hypogaea HOM05D004182 ORTHO05D010127 2.4e-15 86.7 44 88.6
Gohir.A05G366050 Gossypium hirsutum HOM05D001966 ORTHO05D011119 2.4e-15 86.7 50 84.0
VMungo0647G1304 Vigna mungo HOM05D004182 ORTHO05D010127 2.4e-15 86.7 109 48.6
arahy.Tifrunner.gnm1.ann1.VLT00F Arachis hypogaea HOM05D001966 ORTHO05D011119 5.3e-15 85.5 44 93.2
FAN26G2239 Fragaria x ananassa HOM05D004182 ORTHO05D010449 6.9e-15 85.1 48 87.5
LjContig00318g0013893 Lotus japonicus HOM05D004182 ORTHO05D007321 9.1e-15 84.7 44 86.4
Glyma.20G027700 Glycine max HOM05D001966 ORTHO05D010127 2.6e-14 83.2 64 59.4
Gohir.D05G230250 Gossypium hirsutum HOM05D001966 ORTHO05D011119 2.6e-14 83.2 50 80.0
Gohir.D10G160332 Gossypium hirsutum HOM05D001966 ORTHO05D021579 3.4e-14 82.8 68 66.2
Glyma.05G084375 Glycine max HOM05D004182 ORTHO05D010127 4.5e-14 82.4 54 72.2
Cpa.g.sc302.2 Carica papaya HOM05D001966 ORTHO05D010127 7.7e-14 81.6 44 84.1
ClCG02G011190 Citrullus lanatus HOM05D000540 ORTHO05D000681 7.7e-14 81.6 93 49.5
Gohir.1Z050966 Gossypium hirsutum HOM05D001966 ORTHO05D010127 7.7e-14 81.6 44 84.1
Phvul.008G246600 Phaseolus vulgaris HOM05D001966 ORTHO05D010127 1.0e-13 81.3 63 66.7
A08p09050 Brassica napus HOM05D001966 ORTHO05D010127 1.3e-13 80.9 62 66.1
Gohir.D11G243550 Gossypium hirsutum HOM05D001966 ORTHO05D021579 2.2e-13 80.1 66 65.2
EL10Ac7g17373 Beta vulgaris HOM05D004182 ORTHO05D010127 3.8e-13 79.3 44 81.8
Nn6g32819 Nelumbo nucifera HOM05D001966 ORTHO05D010127 5.0e-13 79.0 46 76.1
Sc05g0009610 Simmondsia chinensis HOM05D001966 ORTHO05D011119 6.5e-13 78.6 41 92.7
Glyma.11G218300 Glycine max HOM05D001966 ORTHO05D011119 8.5e-13 78.2 60 71.7
TPR.G18363 Trifolium pratense HOM05D000107 ORTHO05D000062 1.9e-12 77.0 44 79.5
Nn029s41582 Nelumbo nucifera HOM05D001966 ORTHO05D010127 2.5e-12 76.6 44 79.5
Nn031s41607 Nelumbo nucifera HOM05D001966 ORTHO05D010127 2.5e-12 76.6 44 79.5
Nn064s42219 Nelumbo nucifera HOM05D001966 ORTHO05D010127 2.5e-12 76.6 44 79.5
Nn1g00555 Nelumbo nucifera HOM05D001966 ORTHO05D010127 2.5e-12 76.6 46 76.1
Nn212s45204 Nelumbo nucifera HOM05D001966 ORTHO05D010127 2.5e-12 76.6 44 79.5
Nn264s45948 Nelumbo nucifera HOM05D001966 ORTHO05D010127 2.5e-12 76.6 44 79.5
Nn304s46230 Nelumbo nucifera HOM05D001966 ORTHO05D010127 2.5e-12 76.6 44 79.5
Nn349s46476 Nelumbo nucifera HOM05D001966 ORTHO05D010127 2.5e-12 76.6 44 79.5
Nn403s46569 Nelumbo nucifera HOM05D001966 ORTHO05D010127 2.5e-12 76.6 44 79.5
Nn442s46689 Nelumbo nucifera HOM05D001966 ORTHO05D010127 2.5e-12 76.6 44 79.5
Nn4g25380 Nelumbo nucifera HOM05D001966 ORTHO05D010127 2.5e-12 76.6 44 79.5
Lsat_1_v5_gn_6_14561 Lactuca sativa HOM05D001966 ORTHO05D010127 3.2e-12 76.3 43 79.1
Nitab4.5_0006306g0030 Nicotiana tabacum HOM05D001966 ORTHO05D010127 3.2e-12 76.3 45 77.8
TPR.G40147 Trifolium pratense HOM05D003168 ORTHO05D011119 1.2e-11 74.3 55 67.3
Cpa.g.sc2529.2 Carica papaya HOM05D004182 ORTHO05D010127 4.7e-11 72.4 42 78.6
Gohir.A04G110920 Gossypium hirsutum HOM05D001966 ORTHO05D011119 6.1e-11 72.0 50 72.0
Gohir.A04G110980 Gossypium hirsutum HOM05D001966 ORTHO05D011119 6.1e-11 72.0 50 72.0
ECA247G0757 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.8e-10 70.5 48 70.8
BcaC04g20783 Brassica carinata HOM05D004182 ORTHO05D010127 3.0e-10 69.7 34 91.2
Manes.13G063850 Manihot esculenta HOM05D001966 ORTHO05D011119 3.0e-10 69.7 51 72.5
Sopen04g018020 Solanum pennellii HOM05D001966 ORTHO05D011119 3.0e-10 69.7 44 81.8
Nitab4.5_0018109g0010 Nicotiana tabacum HOM05D001966 ORTHO05D010127 5.1e-10 68.9 35 88.6
Gohir.A05G327708 Gossypium hirsutum HOM05D001966 ORTHO05D010127 6.7e-10 68.6 37 81.1
Sc04g0003140 Simmondsia chinensis HOM05D004182 ORTHO05D010127 1.1e-09 67.8 38 86.8
Oeu058351.1 Olea europaea HOM05D004182 ORTHO05D034028 2.6e-09 66.6 52 69.2
arahy.Tifrunner.gnm1.ann1.CSY78X Arachis hypogaea HOM05D000216 ORTHO05D000634 1.3e-08 64.3 32 87.5
Sopen03g036740 Solanum pennellii HOM05D001966 ORTHO05D010127 6.3e-08 62.0 35 80.0
Peaxi162Scf00080g00510 Petunia axillaris HOM05D011856 ORTHO05D013014 1.4e-07 60.8 31 87.1
arahy.Tifrunner.gnm1.ann1.0KS2YP Arachis hypogaea HOM05D004182 ORTHO05D007321 4.1e-07 59.3 31 83.9
EL10Ac5g11179 Beta vulgaris HOM05D001966 ORTHO05D021579 7.0e-07 58.5 39 74.4
VMungo0720G0997 Vigna mungo HOM05D004182 ORTHO05D007321 1.5e-06 57.4 29 89.7
arahy.Tifrunner.gnm1.ann1.QSVN22 Arachis hypogaea HOM05D004182 ORTHO05D010127 2.6e-06 56.6 28 100.0
BcaC04g22013 Brassica carinata HOM05D004182 ORTHO05D010127 2.6e-06 56.6 119 40.3
Oeu059001.1 Olea europaea HOM05D000540 ORTHO05D000681 4.5e-06 55.8 30 86.7
Atru.chr1.3577 Acer truncatum HOM05D000680 ORTHO05D000738 5.9e-06 55.5 50 62.0
BolC9t56917H Brassica oleracea HOM05D004182 ORTHO05D010127 7.7e-06 55.1 43 74.4


User provided reference genes

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