Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.CUZL6Q Arachis hypogaea HOM05D004800 ORTHO05D005842 2.5e-110 402.1 206 100.0
arahy.Tifrunner.gnm1.ann1.N4WP0Z Arachis hypogaea HOM05D004800 ORTHO05D005842 2.5e-110 402.1 206 100.0
arahy.Tifrunner.gnm1.ann1.YE5PM3 Arachis hypogaea HOM05D004800 ORTHO05D005842 4.2e-105 384.8 206 96.6
arahy.Tifrunner.gnm1.ann1.D9UBCD Arachis hypogaea HOM05D004800 ORTHO05D005842 1.6e-104 382.9 206 96.1
arahy.Tifrunner.gnm1.ann1.Y76JQK Arachis hypogaea HOM05D004800 ORTHO05D005842 1.2e-64 250.4 196 73.5
arahy.Tifrunner.gnm1.ann1.RJ1WNK Arachis hypogaea HOM05D004800 ORTHO05D005842 3.2e-41 172.6 206 54.4
VMungo0647G1387 Vigna mungo HOM05D004800 ORTHO05D005842 4.0e-39 165.6 205 48.3
Phvul.001G041300 Phaseolus vulgaris HOM05D004800 ORTHO05D005842 8.8e-39 164.5 205 46.8
Lj5g0013304 Lotus japonicus HOM05D004800 ORTHO05D005842 1.2e-38 164.1 206 49.0
Glyma.14G101700 Glycine max HOM05D004800 ORTHO05D005842 7.5e-38 161.4 207 48.3
Lj1g0022737 Lotus japonicus HOM05D004800 ORTHO05D005842 6.3e-37 158.3 202 44.1
arahy.Tifrunner.gnm1.ann1.HEPM80 Arachis hypogaea HOM05D004800 ORTHO05D005842 1.8e-36 156.8 82 95.1
Medtr3g105925 Medicago truncatula HOM05D004800 ORTHO05D005842 1.8e-36 156.8 214 45.8
COL.COLO4_18955 Corchorus olitorius HOM05D004800 ORTHO05D005842 3.1e-36 156.0 208 42.3
Haze_21408 Corylus avellana HOM05D004800 ORTHO05D005842 7.0e-36 154.8 203 44.8
Phvul.009G086600 Phaseolus vulgaris HOM05D004800 ORTHO05D005842 9.1e-36 154.5 208 44.2
TPR.G1887 Trifolium pratense HOM05D004800 ORTHO05D005842 9.1e-36 154.5 213 46.0
Thecc.09G015200 Theobroma cacao HOM05D004800 ORTHO05D005842 1.2e-35 154.1 196 43.4
Cfa013047 Carpinus fangiana HOM05D004800 ORTHO05D005842 1.6e-35 153.7 197 45.2
VMungo1309G1055 Vigna mungo HOM05D004800 ORTHO05D005842 1.6e-35 153.7 208 44.2
Ca_15781_v3 Cicer arietinum L. HOM05D004800 ORTHO05D005842 2.7e-35 152.9 212 45.3
Duzib168G1619 Durio zibethinus HOM05D004800 ORTHO05D005842 2.7e-35 152.9 207 43.0
Psat5g033480 Pisum sativum HOM05D004800 ORTHO05D005842 3.5e-35 152.5 205 45.4
Gorai.009G063300 Gossypium raimondii HOM05D004800 ORTHO05D005842 4.5e-35 152.1 205 42.9
Gohir.A05G060000 Gossypium hirsutum HOM05D004800 ORTHO05D005842 5.9e-35 151.8 205 41.5
Sed0002840 Sechium edule HOM05D004800 ORTHO05D005842 5.9e-35 151.8 196 41.3
Gohir.D05G062200 Gossypium hirsutum HOM05D004800 ORTHO05D005842 1.7e-34 150.2 205 42.4
Glyma.06G061100 Glycine max HOM05D004800 ORTHO05D005842 1.9e-33 146.7 208 42.8
TAR625G0311 Trochodendron aralioides HOM05D004800 ORTHO05D005842 7.2e-33 144.8 209 39.7
CiPaw.08G005800 Carya illinoinensis HOM05D004800 ORTHO05D005842 9.5e-33 144.4 197 42.1
Sabra06G0206800 Salix brachista HOM05D004800 ORTHO05D005842 9.5e-33 144.4 197 42.6
TAR625G0162 Trochodendron aralioides HOM05D004800 ORTHO05D005842 9.5e-33 144.4 209 39.2
Manes.03G008100 Manihot esculenta HOM05D004800 ORTHO05D005842 1.2e-32 144.1 196 43.4
Manes.16G130200 Manihot esculenta HOM05D004800 ORTHO05D005842 1.2e-32 144.1 197 42.1
Potri.006G264700 Populus trichocarpa HOM05D004800 ORTHO05D005842 1.2e-32 144.1 204 42.6
TWI32G1317 Tripterygium wilfordii HOM05D004800 ORTHO05D005842 1.2e-32 144.1 196 42.9
FAN27G0477 Fragaria x ananassa HOM05D004800 ORTHO05D005842 2.1e-32 143.3 205 42.0
Ciclev10009140m.g Citrus clementina HOM05D004800 ORTHO05D005842 4.7e-32 142.1 197 40.1
AUR62032420 Chenopodium quinoa HOM05D004800 ORTHO05D005842 6.1e-32 141.7 207 41.1
CANSAT25G3039 Cannabis sativa HOM05D004800 ORTHO05D005842 8.0e-32 141.4 204 39.7
QL02p018802 Quercus lobata HOM05D004800 ORTHO05D005842 1.0e-31 141.0 197 39.6
FvH4_2g41170 Fragaria vesca HOM05D004800 ORTHO05D005842 1.8e-31 140.2 205 41.0
TWI34G0615 Tripterygium wilfordii HOM05D004800 ORTHO05D005842 1.8e-31 140.2 196 41.3
Cpa.g.sc148.17 Carica papaya HOM05D004800 ORTHO05D005842 2.3e-31 139.8 205 41.5
FAN20G2958 Fragaria x ananassa HOM05D004800 ORTHO05D005842 2.3e-31 139.8 205 41.0
RcHm_v2.0_Chr6g0299361 Rosa chinensis HOM05D004800 ORTHO05D005842 2.3e-31 139.8 204 40.2
Hma1.2p1_0389F.1_g142470 Hydrangea macrophylla HOM05D004800 ORTHO05D005842 4.0e-31 139.0 203 39.4
EL10Ac2g02494 Beta vulgaris HOM05D004800 ORTHO05D005842 5.2e-31 138.7 200 43.0
Dinv08182 Davidia involucrata HOM05D004800 ORTHO05D005842 5.2e-31 138.7 197 40.6
Dinv13413 Davidia involucrata HOM05D004800 ORTHO05D005842 5.2e-31 138.7 197 40.1
arahy.Tifrunner.gnm1.ann1.D8NHAG Arachis hypogaea HOM05D004800 ORTHO05D005842 6.8e-31 138.3 204 41.2
AUR62024801 Chenopodium quinoa HOM05D004800 ORTHO05D005842 6.8e-31 138.3 207 40.1
Prupe.1G394400 Prunus persica HOM05D004800 ORTHO05D005842 6.8e-31 138.3 196 38.8
CSS0020729 Camellia sinensis var. sinensis HOM05D004800 ORTHO05D005842 1.2e-30 137.5 197 40.6
CSS0041988 Camellia sinensis var. sinensis HOM05D004800 ORTHO05D005842 1.2e-30 137.5 197 40.6
GSVIVG01035974001 Vitis vinifera HOM05D004800 ORTHO05D005842 7.5e-30 134.8 179 40.8
DCAR_022862 Daucus carota HOM05D004800 ORTHO05D005842 1.3e-29 134.0 197 39.6
THA.LOC104814986 Tarenaya hassleriana HOM05D004800 ORTHO05D005842 1.7e-29 133.7 206 37.4
vmacro05151 Vaccinium macrocarpon HOM05D004800 ORTHO05D005842 1.7e-29 133.7 182 41.8
Rhsim07G0165700 Rhododendron simsii HOM05D004800 ORTHO05D005842 2.2e-29 133.3 188 40.4
Hund02986 Selenicereus undatus HOM05D004800 ORTHO05D005842 4.9e-29 132.1 199 40.7
Sabra18G0021000 Salix brachista HOM05D004800 ORTHO05D005842 6.3e-29 131.7 209 39.7
TPR.G38911 Trifolium pratense HOM05D004800 ORTHO05D005842 6.3e-29 131.7 188 44.1
CSS0021373 Camellia sinensis var. sinensis HOM05D004800 ORTHO05D005842 8.3e-29 131.3 182 42.3
Sp2g22450 Schrenkiella parvula HOM05D004800 ORTHO05D005842 1.8e-28 130.2 207 38.2
MD08G1055900 Malus domestica HOM05D004800 ORTHO05D005842 2.4e-28 129.8 196 37.8
Lalb_Chr11g0063501 Lupinus albus HOM05D004800 ORTHO05D005842 3.1e-28 129.4 172 44.2
AT5G25080 Arabidopsis thaliana HOM05D004800 ORTHO05D005842 5.4e-28 128.6 199 38.2
Psat6g026000 Pisum sativum HOM05D004800 ORTHO05D005842 7.0e-28 128.3 193 41.5
Eucgr.C02606 Eucalyptus grandis HOM05D004800 ORTHO05D005842 9.2e-28 127.9 196 39.8
Eucgr.L02918 Eucalyptus grandis HOM05D004800 ORTHO05D005842 1.2e-27 127.5 196 39.8
Atru.chr7.2559 Acer truncatum HOM05D004800 ORTHO05D005842 1.6e-27 127.1 198 38.4
HanXRQChr13g0411011 Helianthus annuus HOM05D004800 ORTHO05D005842 1.6e-27 127.1 201 37.3
A06p35840 Brassica napus HOM05D004800 ORTHO05D005842 2.0e-27 126.7 197 37.1
BraA06t26509Z Brassica rapa HOM05D004800 ORTHO05D005842 2.0e-27 126.7 197 37.1
Oeu009650.1 Olea europaea HOM05D004800 ORTHO05D005842 2.7e-27 126.3 207 34.3
Aqoxy7G03382 Aquilegia oxysepala HOM05D004800 ORTHO05D005842 3.5e-27 125.9 199 37.7
MSTRG.25830 Avicennia marina HOM05D004800 ORTHO05D005842 3.5e-27 125.9 204 35.3
Lj7A735T34 Lonicera japonica HOM05D004800 ORTHO05D005842 3.5e-27 125.9 197 37.6
Cc08_g07200 Coffea canephora HOM05D004800 ORTHO05D005842 4.5e-27 125.6 194 37.1
MELO3C016954.2 Cucumis melo HOM05D004800 ORTHO05D005842 4.5e-27 125.6 196 36.7
Sc09g0010680 Simmondsia chinensis HOM05D004800 ORTHO05D005842 4.5e-27 125.6 196 37.8
BcaNung03198 Brassica carinata HOM05D004800 ORTHO05D005842 7.8e-27 124.8 199 38.2
CsaV3_4G036490 Cucumis sativus L. HOM05D004800 ORTHO05D005842 7.8e-27 124.8 196 37.2
BraA09t36276Z Brassica rapa HOM05D004800 ORTHO05D005842 1.0e-26 124.4 213 39.9
Oeu001621.3 Olea europaea HOM05D004800 ORTHO05D005842 1.0e-26 124.4 207 33.3
PGR044G1902 Punica granatum HOM05D004800 ORTHO05D005842 1.0e-26 124.4 202 39.1
BcaNung02298 Brassica carinata HOM05D004800 ORTHO05D005842 1.7e-26 123.6 200 38.0
CANSAT35G0701 Cannabis sativa HOM05D004800 ORTHO05D005842 1.7e-26 123.6 199 39.7
ClCG05G016220 Citrullus lanatus HOM05D004800 ORTHO05D005842 2.9e-26 122.9 196 36.7
A09p06310 Brassica napus HOM05D004800 ORTHO05D005842 3.8e-26 122.5 213 39.4
CAN.G333.3 Capsicum annuum HOM05D004800 ORTHO05D005842 3.8e-26 122.5 204 35.3
Migut.A00358 Erythranthe guttata HOM05D004800 ORTHO05D005842 5.0e-26 122.1 205 35.1
SGA_v2.0_scaffold147G36341 Striga asiatica HOM05D004800 ORTHO05D005842 6.6e-26 121.7 196 36.7
Nitab4.5_0010613g0010 Nicotiana tabacum HOM05D004800 ORTHO05D005842 8.6e-26 121.3 218 34.4
Lsat_1_v5_gn_5_49760 Lactuca sativa HOM05D004800 ORTHO05D005842 1.1e-25 120.9 200 38.0
Aa31LG11G4300 Aethionema arabicum HOM05D004800 ORTHO05D005842 2.5e-25 119.8 198 35.4
arahy.Tifrunner.gnm1.ann1.1BAV2G Arachis hypogaea HOM05D004800 ORTHO05D005842 2.5e-25 119.8 204 38.2
AL6G36710 Arabidopsis lyrata HOM05D004800 ORTHO05D005842 4.3e-25 119.0 202 37.1
BcaC04g23570 Brassica carinata HOM05D004800 ORTHO05D005842 5.6e-25 118.6 196 39.8
C09p07000 Brassica napus HOM05D004800 ORTHO05D005842 5.6e-25 118.6 196 39.8
Thhalv10004902m.g Eutrema salsugineum HOM05D004800 ORTHO05D005842 7.3e-25 118.2 207 35.7
PSO339G1021 Papaver somniferum HOM05D004800 ORTHO05D005842 1.2e-24 117.5 210 33.3
SalBow4G3208 Salvia bowleyana HOM05D004800 ORTHO05D005842 1.2e-24 117.5 199 35.2
PSO384G2235 Papaver somniferum HOM05D004800 ORTHO05D005842 2.8e-24 116.3 208 33.7
Solyc07g008750.4 Solanum lycopersicum HOM05D004800 ORTHO05D005842 3.6e-24 115.9 204 33.8
Medtr1g014130 Medicago truncatula HOM05D004800 ORTHO05D005842 4.7e-24 115.5 166 42.8
Peaxi162Scf00006g00249 Petunia axillaris HOM05D004800 ORTHO05D005842 6.1e-24 115.2 207 36.7
Actinidia14132 Actinidia chinensis HOM05D004800 ORTHO05D005842 8.0e-24 114.8 200 38.0
Sopen07g004690 Solanum pennellii HOM05D004800 ORTHO05D005842 1.0e-23 114.4 197 34.0
PGSC0003DMG401028727 Solanum tuberosum HOM05D004800 ORTHO05D005842 1.4e-23 114.0 204 33.8
HPP92_017174 Vanilla planifolia HOM05D004800 ORTHO05D005842 1.4e-23 114.0 210 34.3
Carub.0006s2291 Capsella rubella HOM05D004800 ORTHO05D005842 1.8e-23 113.6 199 36.2
BcaNung06718 Brassica carinata HOM05D004800 ORTHO05D005842 3.0e-23 112.8 187 37.4
unitig_749.g13819 Utricularia gibba HOM05D004800 ORTHO05D005842 3.0e-23 112.8 199 34.2
C07p42740 Brassica napus HOM05D004800 ORTHO05D005842 4.0e-23 112.5 223 34.1
BolC9t53616H Brassica oleracea HOM05D004800 ORTHO05D005842 6.8e-23 111.7 181 39.8
ECA240G1139 Erigeron canadensis HOM05D004800 ORTHO05D005842 6.8e-23 111.7 133 45.9
BolC7t44804H Brassica oleracea HOM05D004800 ORTHO05D005842 1.5e-22 110.5 223 34.1
Nn2g12411 Nelumbo nucifera HOM05D004800 ORTHO05D005842 7.5e-22 108.2 141 42.6
Zm00001eb177850 Zea mays HOM05D004800 ORTHO05D005842 2.9e-21 106.3 207 33.3
ATR0580G220 Amborella trichopoda HOM05D004800 ORTHO05D005842 3.7e-21 105.9 184 34.2
Actinidia23108 Actinidia chinensis HOM05D004800 ORTHO05D005842 6.4e-21 105.1 201 35.8
Os08g0270200 Oryza sativa ssp. japonica HOM05D004800 ORTHO05D005842 5.4e-20 102.1 201 33.3
CDE02G3876 Ceratophyllum demersum HOM05D004800 ORTHO05D005842 1.2e-19 100.9 198 33.8
CARHR188420 Cardamine hirsuta HOM05D004800 ORTHO05D005842 4.6e-19 99.0 198 31.8
MBI14_g09103_MAGBIO Magnolia biondii HOM05D004800 ORTHO05D005842 2.3e-18 96.7 186 33.9
SHI21074 Sapria himalayana HOM05D004800 ORTHO05D005842 1.6e-16 90.5 216 31.5
unitig_26.g9784 Utricularia gibba HOM05D004800 ORTHO05D005842 1.2e-14 84.3 195 30.3
Nitab4.5_0000617g0080 Nicotiana tabacum HOM05D004800 ORTHO05D005842 5.8e-14 82.0 85 50.6
Lalb_Chr24g0401961 Lupinus albus HOM05D004800 ORTHO05D005842 9.8e-14 81.3 96 49.0
BcaB04g19808 Brassica carinata HOM05D004800 ORTHO05D005842 1.7e-13 80.5 198 31.8
AagrBONN_evm.TU.Sc2ySwM_368.3173 Anthoceros agrestis HOM05D004800 ORTHO05D005842 2.0e-11 73.6 161 33.5
SEGI_18119 Sequoiadendron giganteum HOM05D004800 ORTHO05D005842 4.6e-11 72.4 95 31.6
SMO140G0030 Selaginella moellendorffii HOM05D004800 ORTHO05D005842 3.6e-08 62.8 165 27.3
TPR.G28957 Trifolium pratense HOM05D000201 ORTHO05D000421 4.7e-08 62.4 57 56.1
Peaxi162Scf01038g00137 Petunia axillaris HOM05D004800 ORTHO05D005842 1.1e-07 61.2 119 31.9
Potri.018G018100 Populus trichocarpa HOM05D004800 ORTHO05D005842 1.8e-07 60.5 119 33.6
Pp3c2_14120 Physcomitrium patens HOM05D004800 ORTHO05D005842 1.5e-06 57.4 156 28.2
MCO11G643 Micromonas commoda HOM05D004800 ORTHO05D005842 5.8e-06 55.5 133 27.1


User provided reference genes

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