Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.86P1YE Arachis hypogaea HOM05D001765 ORTHO05D003527 2.7e-61 238.4 116 100.0
arahy.Tifrunner.gnm1.ann1.CUK8Y6 Arachis hypogaea HOM05D001765 ORTHO05D003527 2.7e-61 238.4 116 100.0
arahy.Tifrunner.gnm1.ann1.IX6XHP Arachis hypogaea HOM05D001765 ORTHO05D003527 1.4e-25 119.8 58 96.6
Haze_03845 Corylus avellana HOM05D001765 ORTHO05D003527 3.8e-23 111.7 105 55.2
CiPaw.08G138100 Carya illinoinensis HOM05D001765 ORTHO05D003527 4.0e-20 101.7 58 79.3
Oeu002033.1 Olea europaea HOM05D001765 ORTHO05D003527 8.8e-20 100.5 58 79.3
PGR119G0836 Punica granatum HOM05D001765 ORTHO05D003527 1.2e-19 100.1 58 75.9
CANSAT01G1346 Cannabis sativa HOM05D001765 ORTHO05D003527 2.6e-19 99.0 58 75.9
Migut.H02511 Erythranthe guttata HOM05D001765 ORTHO05D003527 4.4e-19 98.2 58 75.9
VMungo0647G1062 Vigna mungo HOM05D001765 ORTHO05D003527 5.7e-19 97.8 89 57.3
Aqoxy5G01550 Aquilegia oxysepala HOM05D001765 ORTHO05D003527 1.3e-18 96.7 58 75.9
FvH4_1g12530 Fragaria vesca HOM05D001765 ORTHO05D003527 1.3e-18 96.7 58 72.4
FAN19G2967 Fragaria x ananassa HOM05D001765 ORTHO05D003527 1.3e-18 96.7 58 72.4
FAN28G1354 Fragaria x ananassa HOM05D001765 ORTHO05D003527 1.3e-18 96.7 58 72.4
Glyma.14G008500 Glycine max HOM05D001765 ORTHO05D003527 1.3e-18 96.7 58 74.1
Lalb_Chr08g0235841 Lupinus albus HOM05D001765 ORTHO05D003527 1.3e-18 96.7 58 75.9
Cfa006911 Carpinus fangiana HOM05D001765 ORTHO05D003527 1.7e-18 96.3 58 74.1
Cc07_g11660 Coffea canephora HOM05D001765 ORTHO05D003527 1.7e-18 96.3 58 74.1
GSVIVG01018876001 Vitis vinifera HOM05D001765 ORTHO05D003527 1.7e-18 96.3 58 74.1
Dinv05607 Davidia involucrata HOM05D001765 ORTHO05D003527 2.2e-18 95.9 58 74.1
Dinv10225 Davidia involucrata HOM05D001765 ORTHO05D003527 2.2e-18 95.9 58 74.1
Lj1g0003490 Lotus japonicus HOM05D001765 ORTHO05D003527 2.2e-18 95.9 58 75.9
Prupe.7G161600 Prunus persica HOM05D001765 ORTHO05D003527 2.2e-18 95.9 58 72.4
QL06p035070 Quercus lobata HOM05D001765 ORTHO05D003527 2.2e-18 95.9 58 75.9
Thecc.04G047100 Theobroma cacao HOM05D001765 ORTHO05D003527 2.2e-18 95.9 58 75.9
CSS0038408 Camellia sinensis var. sinensis HOM05D001765 ORTHO05D003527 3.7e-18 95.1 108 50.9
MD02G1139500 Malus domestica HOM05D001765 ORTHO05D003527 3.7e-18 95.1 58 72.4
Cc08_g04490 Coffea canephora HOM05D001765 ORTHO05D003527 6.3e-18 94.4 58 72.4
Dinv40028 Davidia involucrata HOM05D001765 ORTHO05D003527 6.3e-18 94.4 56 78.6
Phvul.008G284700 Phaseolus vulgaris HOM05D001765 ORTHO05D003527 6.3e-18 94.4 89 56.2
RcHm_v2.0_Chr2g0100461 Rosa chinensis HOM05D001765 ORTHO05D003527 6.3e-18 94.4 58 70.7
SalBow8G1820 Salvia bowleyana HOM05D001765 ORTHO05D003527 6.3e-18 94.4 58 72.4
SGA_v2.0_scaffold7G03543 Striga asiatica HOM05D006805 ORTHO05D003527 6.3e-18 94.4 58 74.1
Actinidia19217 Actinidia chinensis HOM05D001765 ORTHO05D003527 8.3e-18 94.0 58 72.4
arahy.Tifrunner.gnm1.ann1.WC8DZD Arachis hypogaea HOM05D001765 ORTHO05D003527 1.1e-17 93.6 89 55.1
CsaV3_4G005440 Cucumis sativus L. HOM05D001765 ORTHO05D003527 1.1e-17 93.6 58 70.7
MD15G1252600 Malus domestica HOM05D001765 ORTHO05D003527 1.1e-17 93.6 58 70.7
vmacro17720 Vaccinium macrocarpon HOM05D001765 ORTHO05D003527 1.1e-17 93.6 57 73.7
vmacro22958 Vaccinium macrocarpon HOM05D001765 ORTHO05D003527 1.1e-17 93.6 57 73.7
DCAR_025478 Daucus carota HOM05D001765 ORTHO05D003527 1.8e-17 92.8 58 72.4
Eucgr.A00850 Eucalyptus grandis HOM05D001765 ORTHO05D003527 1.8e-17 92.8 58 72.4
Nitab4.5_0000136g0160 Nicotiana tabacum HOM05D001765 ORTHO05D003527 1.8e-17 92.8 58 72.4
Nitab4.5_0009648g0050 Nicotiana tabacum HOM05D001765 ORTHO05D003527 1.8e-17 92.8 58 72.4
vmacro22966 Vaccinium macrocarpon HOM05D001765 ORTHO05D003527 1.8e-17 92.8 58 70.7
Duzib147G0794 Durio zibethinus HOM05D001765 ORTHO05D003527 2.4e-17 92.4 58 70.7
Rhsim08G0122600 Rhododendron simsii HOM05D001765 ORTHO05D003527 2.4e-17 92.4 58 70.7
Cfa010227 Carpinus fangiana HOM05D001765 ORTHO05D003527 3.1e-17 92.0 56 75.0
Peaxi162Scf00207g01135 Petunia axillaris HOM05D001765 ORTHO05D003527 3.1e-17 92.0 60 70.0
Peaxi162Scf01385g00023 Petunia axillaris HOM05D001765 ORTHO05D003527 3.1e-17 92.0 58 70.7
CDE04G0335 Ceratophyllum demersum HOM05D001765 ORTHO05D003527 4.1e-17 91.7 58 69.0
TPR.G1302 Trifolium pratense HOM05D001765 ORTHO05D003527 4.1e-17 91.7 58 74.1
arahy.Tifrunner.gnm1.ann1.EZ0MZE Arachis hypogaea HOM05D001765 ORTHO05D003527 5.3e-17 91.3 89 55.1
arahy.Tifrunner.gnm1.ann1.M20B87 Arachis hypogaea HOM05D001765 ORTHO05D003527 5.3e-17 91.3 89 55.1
CDE07G0806 Ceratophyllum demersum HOM05D001765 ORTHO05D003527 7.0e-17 90.9 58 69.0
MELO3C016404.2 Cucumis melo HOM05D001765 ORTHO05D003527 7.0e-17 90.9 58 70.7
Gohir.D03G000300 Gossypium hirsutum HOM05D001765 ORTHO05D003527 7.0e-17 90.9 58 72.4
Gorai.003G000600 Gossypium raimondii HOM05D001765 ORTHO05D003527 7.0e-17 90.9 58 72.4
MBI18_g05082_MAGBIO Magnolia biondii HOM05D001765 ORTHO05D003527 7.0e-17 90.9 52 78.8
Gohir.A07G233400 Gossypium hirsutum HOM05D001765 ORTHO05D003527 1.2e-16 90.1 58 72.4
Peaxi162Scf00207g01134 Petunia axillaris HOM05D001765 ORTHO05D003527 1.2e-16 90.1 58 69.0
Aa31LG11G8000 Aethionema arabicum HOM05D001765 ORTHO05D003527 2.0e-16 89.4 58 69.0
Gohir.A05G416501 Gossypium hirsutum HOM05D001765 ORTHO05D003527 2.0e-16 89.4 58 70.7
Gohir.A05G416901 Gossypium hirsutum HOM05D001765 ORTHO05D003527 2.0e-16 89.4 58 70.7
Gorai.012G000100 Gossypium raimondii HOM05D001765 ORTHO05D003527 2.0e-16 89.4 58 70.7
MBI10_g00746_MAGBIO Magnolia biondii HOM05D001765 ORTHO05D003527 2.0e-16 89.4 64 68.8
ATR1125G025 Amborella trichopoda HOM05D001765 ORTHO05D003527 2.7e-16 89.0 49 79.6
CARHR182120 Cardamine hirsuta HOM05D001765 ORTHO05D003527 2.7e-16 89.0 58 67.2
Gohir.D12G000200 Gossypium hirsutum HOM05D001765 ORTHO05D003527 2.7e-16 89.0 58 70.7
Psat2g004640 Pisum sativum HOM05D001765 ORTHO05D003527 2.7e-16 89.0 58 72.4
unitig_899.g14639 Utricularia gibba HOM05D001765 ORTHO05D003527 2.7e-16 89.0 58 69.0
HPP92_011573 Vanilla planifolia HOM05D001765 ORTHO05D003527 2.7e-16 89.0 56 69.6
Ca_06451_v3 Cicer arietinum L. HOM05D001765 ORTHO05D003527 3.5e-16 88.6 58 72.4
Potri.005G118900 Populus trichocarpa HOM05D001765 ORTHO05D003527 3.5e-16 88.6 58 69.0
BolC2t11799H Brassica oleracea HOM05D001765 ORTHO05D003527 4.5e-16 88.2 58 65.5
THA.LOC104826037 Tarenaya hassleriana HOM05D001765 ORTHO05D003527 4.5e-16 88.2 58 67.2
BcaC03g17719 Brassica carinata HOM05D001765 ORTHO05D005876 5.9e-16 87.8 58 65.5
A02p38130 Brassica napus HOM05D001765 ORTHO05D003527 5.9e-16 87.8 58 65.5
Thhalv10005097m.g Eutrema salsugineum HOM05D001765 ORTHO05D003527 5.9e-16 87.8 58 67.2
Gorai.009G456300 Gossypium raimondii HOM05D001765 ORTHO05D003527 5.9e-16 87.8 56 73.2
Gorai.010G246100 Gossypium raimondii HOM05D001765 ORTHO05D003527 5.9e-16 87.8 58 69.0
Medtr5g097230 Medicago truncatula HOM05D001765 ORTHO05D003527 5.9e-16 87.8 58 70.7
Sp2g19750 Schrenkiella parvula HOM05D001765 ORTHO05D003527 5.9e-16 87.8 58 67.2
SpUn0021_0100 Schrenkiella parvula HOM05D001765 ORTHO05D003527 5.9e-16 87.8 58 67.2
Solyc02g062530.3 Solanum lycopersicum HOM05D001765 ORTHO05D003527 5.9e-16 87.8 58 67.2
Sopen02g013530 Solanum pennellii HOM05D001765 ORTHO05D003527 5.9e-16 87.8 58 67.2
Sed0024924 Sechium edule HOM05D001765 ORTHO05D003527 7.7e-16 87.4 57 64.9
C02p57300 Brassica napus HOM05D001765 ORTHO05D003527 1.0e-15 87.0 56 67.9
Gohir.A10G243200 Gossypium hirsutum HOM05D001765 ORTHO05D003527 1.0e-15 87.0 58 70.7
Gorai.004G000500 Gossypium raimondii HOM05D001765 ORTHO05D003527 1.3e-15 86.7 58 69.0
Manes.02G222800 Manihot esculenta HOM05D001765 ORTHO05D003527 1.3e-15 86.7 58 65.5
Carub.0008s0929 Capsella rubella HOM05D001765 ORTHO05D003527 1.7e-15 86.3 58 65.5
Sabra05G0098000 Salix brachista HOM05D001765 ORTHO05D003527 1.7e-15 86.3 58 67.2
BcaB07g34155 Brassica carinata HOM05D001765 ORTHO05D003527 2.9e-15 85.5 56 66.1
AL8G23120 Arabidopsis lyrata HOM05D001765 ORTHO05D003527 5.0e-15 84.7 58 63.8
AT5G49410 Arabidopsis thaliana HOM05D001765 ORTHO05D003527 5.0e-15 84.7 58 63.8
Gorai.N017600 Gossypium raimondii HOM05D003958 ORTHO05D004864 5.0e-15 84.7 81 55.6
Gohir.A01G232040 Gossypium hirsutum HOM05D001765 ORTHO05D003527 6.5e-15 84.3 58 69.0
Gohir.A08G000008 Gossypium hirsutum HOM05D001765 ORTHO05D003527 6.5e-15 84.3 58 69.0
Gorai.007G380100 Gossypium raimondii HOM05D001765 ORTHO05D003527 6.5e-15 84.3 58 69.0
Os08g0360000 Oryza sativa ssp. japonica HOM05D001765 ORTHO05D003527 8.5e-15 84.0 58 63.8
ClCG07G008720 Citrullus lanatus HOM05D001765 ORTHO05D003527 1.1e-14 83.6 62 64.5
Zm00001eb314680 Zea mays HOM05D001765 ORTHO05D003527 1.9e-14 82.8 58 63.8
Gohir.D10G000101 Gossypium hirsutum HOM05D001765 ORTHO05D003527 2.5e-14 82.4 58 65.5
Gorai.006G275100 Gossypium raimondii HOM05D001765 ORTHO05D003527 3.2e-14 82.0 58 65.5
Atru.chr3.680 Acer truncatum HOM05D001765 ORTHO05D003527 7.2e-14 80.9 53 67.9
Atru.chr3.726 Acer truncatum HOM05D001765 ORTHO05D003527 7.2e-14 80.9 53 67.9
TWI09G0332 Tripterygium wilfordii HOM05D001765 ORTHO05D003527 7.2e-14 80.9 59 66.1
Cfa010228 Carpinus fangiana HOM05D001765 ORTHO05D003527 9.4e-14 80.5 47 76.6
Gohir.D04G192700 Gossypium hirsutum HOM05D001765 ORTHO05D003527 1.2e-13 80.1 58 65.5
TWI73G1042 Tripterygium wilfordii HOM05D001765 ORTHO05D003527 1.6e-13 79.7 59 66.1
Hund05221 Selenicereus undatus HOM05D001765 ORTHO05D003527 1.8e-12 76.3 56 60.7
EL10Ac1g02248 Beta vulgaris HOM05D001765 ORTHO05D003527 2.3e-12 75.9 57 66.7
Cpa.g.sc6.177 Carica papaya HOM05D001765 ORTHO05D003527 6.8e-12 74.3 42 76.2
Ah.00g000090 Amaranthus hybridus HOM05D001765 ORTHO05D003527 2.6e-11 72.4 57 64.9
Actinidia26093 Actinidia chinensis HOM05D001765 ORTHO05D003527 4.4e-11 71.6 42 69.0
SEGI_06712 Sequoiadendron giganteum HOM05D001765 ORTHO05D003527 4.4e-11 71.6 57 52.6
ECA232G4044 Erigeron canadensis HOM05D001765 ORTHO05D003527 1.1e-09 67.0 64 48.4
HanXRQChr09g0261241 Helianthus annuus HOM05D001765 ORTHO05D003527 1.8e-09 66.2 58 50.0
Lsat_1_v5_gn_4_151821 Lactuca sativa HOM05D001765 ORTHO05D003527 1.8e-09 66.2 58 50.0
PGSC0003DMG400015496 Solanum tuberosum HOM05D001765 ORTHO05D003527 2.4e-09 65.9 42 66.7
Peaxi162Scf00207g01123 Petunia axillaris HOM05D033373 ORTHO05D306398 1.3e-07 60.1 94 39.4
TAR375G0793 Trochodendron aralioides HOM05D001765 ORTHO05D003527 4.2e-06 55.1 54 42.6
CSS0000240 Camellia sinensis var. sinensis HOM05D001765 ORTHO05D003527 5.5e-06 54.7 52 40.4


User provided reference genes

Program Settings