Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.6H88WF Arachis hypogaea HOM05D007049 ORTHO05D008896 7.6e-40 166.8 88 100.0
arahy.Tifrunner.gnm1.ann1.CT79FY Arachis hypogaea HOM05D007049 ORTHO05D008896 7.6e-40 166.8 88 100.0
Lalb_Chr03g0041921 Lupinus albus HOM05D007049 ORTHO05D008896 9.9e-32 139.8 83 84.3
Ca_24471_v3 Cicer arietinum L. HOM05D007049 ORTHO05D008896 4.6e-29 131.0 87 75.9
Psat2g187280 Pisum sativum HOM05D007049 ORTHO05D008896 6.0e-29 130.6 81 80.2
Psat7g180160 Pisum sativum HOM05D007049 ORTHO05D008896 7.9e-29 130.2 81 80.2
TPR.G37942 Trifolium pratense HOM05D007049 ORTHO05D008896 7.9e-29 130.2 83 77.1
LjContig00222g0016429 Lotus japonicus HOM05D007049 ORTHO05D008896 1.0e-28 129.8 83 78.3
Psat7g180120 Pisum sativum HOM05D007049 ORTHO05D008896 5.1e-28 127.5 81 80.2
QL04p010524 Quercus lobata HOM05D007049 ORTHO05D008896 4.3e-27 124.4 82 78.0
Glyma.11G013800 Glycine max HOM05D007049 ORTHO05D008896 7.4e-27 123.6 80 78.8
Psat7g180080 Pisum sativum HOM05D007049 ORTHO05D008896 7.4e-27 123.6 81 75.3
Medtr5g008340 Medicago truncatula HOM05D007049 ORTHO05D008896 9.6e-27 123.2 77 80.5
Phvul.002G036400 Phaseolus vulgaris HOM05D007049 ORTHO05D008896 9.6e-27 123.2 83 73.5
VMungo1215G2220 Vigna mungo HOM05D007049 ORTHO05D008896 1.6e-26 122.5 83 73.5
Nitab4.5_0000213g0160 Nicotiana tabacum HOM05D007049 ORTHO05D008896 4.8e-26 120.9 88 72.7
CAN.G4100.1 Capsicum annuum HOM05D007049 ORTHO05D008896 8.2e-26 120.2 88 71.6
PGR042G0623 Punica granatum HOM05D007049 ORTHO05D008896 8.2e-26 120.2 84 73.8
Nitab4.5_0000398g0030 Nicotiana tabacum HOM05D007049 ORTHO05D008896 1.4e-25 119.4 88 71.6
Cc10_g08690 Coffea canephora HOM05D007049 ORTHO05D008896 1.8e-25 119.0 84 70.2
COL.COLO4_06913 Corchorus olitorius HOM05D007049 ORTHO05D008896 2.4e-25 118.6 88 69.3
TWI12G1157 Tripterygium wilfordii HOM05D007049 ORTHO05D008896 3.1e-25 118.2 83 72.3
Peaxi162Scf00078g00061 Petunia axillaris HOM05D007049 ORTHO05D008896 4.0e-25 117.9 86 68.6
TAR624G0348 Trochodendron aralioides HOM05D007049 ORTHO05D008896 4.0e-25 117.9 84 75.0
Nn5g27287 Nelumbo nucifera HOM05D007049 ORTHO05D008896 5.3e-25 117.5 77 77.9
Oeu023195.1 Olea europaea HOM05D007049 ORTHO05D008896 5.3e-25 117.5 85 70.6
PGSC0003DMG401002024 Solanum tuberosum HOM05D007049 ORTHO05D008896 5.3e-25 117.5 88 69.3
FAN18G1167 Fragaria x ananassa HOM05D007049 ORTHO05D008896 6.9e-25 117.1 82 72.0
FAN18G2563 Fragaria x ananassa HOM05D007049 ORTHO05D008896 6.9e-25 117.1 82 72.0
Solyc09g007070.1 Solanum lycopersicum HOM05D007049 ORTHO05D008896 9.0e-25 116.7 87 69.0
Sopen09g001930 Solanum pennellii HOM05D007049 ORTHO05D008896 9.0e-25 116.7 87 69.0
CiPaw.15G066500 Carya illinoinensis HOM05D007049 ORTHO05D008896 1.2e-24 116.3 86 69.8
Psat7g195680 Pisum sativum HOM05D007049 ORTHO05D008896 1.5e-24 115.9 81 75.3
Prupe.8G009200 Prunus persica HOM05D007049 ORTHO05D008896 1.5e-24 115.9 82 72.0
SalBow7G2968 Salvia bowleyana HOM05D007049 ORTHO05D008896 1.5e-24 115.9 85 67.1
CAN.G608.33 Capsicum annuum HOM05D007049 ORTHO05D008896 2.0e-24 115.5 80 73.8
Migut.C01376 Erythranthe guttata HOM05D007049 ORTHO05D008896 2.0e-24 115.5 85 68.2
Hma1.2p1_0400F.1_g144580 Hydrangea macrophylla HOM05D007049 ORTHO05D008896 2.6e-24 115.2 85 71.8
MD10G1006000 Malus domestica HOM05D007049 ORTHO05D008896 2.6e-24 115.2 82 72.0
CSS0000179 Camellia sinensis var. sinensis HOM05D007049 ORTHO05D008896 3.4e-24 114.8 85 68.2
FAN08G2573 Fragaria x ananassa HOM05D007049 ORTHO05D008896 3.4e-24 114.8 76 75.0
Gohir.D13G119000 Gossypium hirsutum HOM05D007049 ORTHO05D008896 3.4e-24 114.8 83 71.1
Gorai.013G133400 Gossypium raimondii HOM05D007049 ORTHO05D008896 3.4e-24 114.8 83 71.1
Gohir.A13G115800 Gossypium hirsutum HOM05D007049 ORTHO05D008896 4.5e-24 114.4 83 71.1
RcHm_v2.0_Chr7g0212661 Rosa chinensis HOM05D007049 ORTHO05D008896 4.5e-24 114.4 84 66.7
Prupe.8G008400 Prunus persica HOM05D007049 ORTHO05D008896 1.0e-23 113.2 82 70.7
Thecc.08G177900 Theobroma cacao HOM05D007049 ORTHO05D008896 1.0e-23 113.2 88 69.3
Duzib177G1207 Durio zibethinus HOM05D007049 ORTHO05D008896 1.3e-23 112.8 88 67.0
CANSAT25G3584 Cannabis sativa HOM05D007049 ORTHO05D008896 2.2e-23 112.1 77 75.3
Eucgr.F02581 Eucalyptus grandis HOM05D007049 ORTHO05D008896 2.2e-23 112.1 75 76.0
RcHm_v2.0_Chr7g0212551 Rosa chinensis HOM05D007049 ORTHO05D008896 2.9e-23 111.7 77 71.4
Sc20g0003280 Simmondsia chinensis HOM05D007049 ORTHO05D008896 3.8e-23 111.3 70 82.9
TAR624G1340 Trochodendron aralioides HOM05D007049 ORTHO05D008896 4.9e-23 110.9 77 75.3
Carub.0004s2178 Capsella rubella HOM05D007049 ORTHO05D008896 6.5e-23 110.5 82 70.7
FAN04G0010 Fragaria x ananassa HOM05D007049 ORTHO05D008896 6.5e-23 110.5 77 71.4
MBI13_g15314_MAGBIO Magnolia biondii HOM05D007049 ORTHO05D008896 6.5e-23 110.5 77 72.7
MBI13_g30327_MAGBIO Magnolia biondii HOM05D007049 ORTHO05D008896 6.5e-23 110.5 77 72.7
Sabra01G0012500 Salix brachista HOM05D007049 ORTHO05D008896 6.5e-23 110.5 88 65.9
unitig_46.g17984 Utricularia gibba HOM05D007049 ORTHO05D008896 8.4e-23 110.2 86 67.4
Cpa.g.sc19.285 Carica papaya HOM05D007049 ORTHO05D008896 1.1e-22 109.8 77 75.3
Os08g0278600 Oryza sativa ssp. japonica HOM05D007049 ORTHO05D008896 1.1e-22 109.8 78 66.7
Aa31LG5G19930 Aethionema arabicum HOM05D007049 ORTHO05D008896 1.4e-22 109.4 82 68.3
RcHm_v2.0_Chr7g0212501 Rosa chinensis HOM05D007049 ORTHO05D008896 1.4e-22 109.4 84 66.7
THA.LOC104824284 Tarenaya hassleriana HOM05D007049 ORTHO05D008896 1.4e-22 109.4 81 67.9
Sabra01G0012700 Salix brachista HOM05D007049 ORTHO05D008896 1.9e-22 109.0 88 65.9
CARHR134570 Cardamine hirsuta HOM05D007049 ORTHO05D008896 2.5e-22 108.6 82 68.3
RcHm_v2.0_Chr6g0251481 Rosa chinensis HOM05D007049 ORTHO05D008896 3.2e-22 108.2 83 66.3
AL4G37190 Arabidopsis lyrata HOM05D007049 ORTHO05D008896 4.2e-22 107.8 82 68.3
Sp4g21990 Schrenkiella parvula HOM05D007049 ORTHO05D008896 4.2e-22 107.8 81 67.9
AT2G39725 Arabidopsis thaliana HOM05D007049 ORTHO05D008896 5.5e-22 107.5 82 68.3
Cfa019294 Carpinus fangiana HOM05D007049 ORTHO05D008896 5.5e-22 107.5 82 69.5
DCAR_006853 Daucus carota HOM05D007049 ORTHO05D008896 5.5e-22 107.5 80 67.5
BcaC02g07431 Brassica carinata HOM05D007049 ORTHO05D008896 7.1e-22 107.1 78 67.9
C04p67530 Brassica napus HOM05D007049 ORTHO05D008896 7.1e-22 107.1 78 67.9
Thhalv10017481m.g Eutrema salsugineum HOM05D007049 ORTHO05D008896 7.1e-22 107.1 82 65.9
DCAR_017595 Daucus carota HOM05D007049 ORTHO05D008896 9.3e-22 106.7 80 67.5
Rhsim08G0116100 Rhododendron simsii HOM05D007049 ORTHO05D008896 1.2e-21 106.3 87 70.1
Ah.05g168610 Amaranthus hybridus HOM05D007049 ORTHO05D008896 1.6e-21 105.9 82 65.9
Sed0002937 Sechium edule HOM05D007049 ORTHO05D008896 1.6e-21 105.9 80 66.2
Ciclev10023082m.g Citrus clementina HOM05D007049 ORTHO05D008896 3.5e-21 104.8 73 72.6
EL10Ac7g16149 Beta vulgaris HOM05D007049 ORTHO05D008896 4.6e-21 104.4 77 67.5
BcaB06g29104 Brassica carinata HOM05D007049 ORTHO05D008896 1.0e-20 103.2 79 67.1
BolC4t28250H Brassica oleracea HOM05D007049 ORTHO05D008896 1.0e-20 103.2 79 67.1
A04p30310 Brassica napus HOM05D007049 ORTHO05D008896 1.3e-20 102.8 79 65.8
BraA04t18476Z Brassica rapa HOM05D007049 ORTHO05D008896 2.3e-20 102.1 79 65.8
MELO3C022175.2 Cucumis melo HOM05D007049 ORTHO05D008896 2.3e-20 102.1 76 65.8
CsaV3_5G039970 Cucumis sativus L. HOM05D007049 ORTHO05D008896 2.3e-20 102.1 76 65.8
HanXRQChr10g0289041 Helianthus annuus HOM05D007049 ORTHO05D008896 5.1e-20 100.9 84 61.9
Prupe.8G008800 Prunus persica HOM05D007049 ORTHO05D008896 5.1e-20 100.9 67 76.1
ClCG08G001090 Citrullus lanatus HOM05D007049 ORTHO05D008896 6.7e-20 100.5 77 66.2
ECA248G1776 Erigeron canadensis HOM05D007049 ORTHO05D008896 8.7e-20 100.1 82 64.6
AUR62022356 Chenopodium quinoa HOM05D007049 ORTHO05D008896 1.9e-19 99.0 77 62.3
AUR62034352 Chenopodium quinoa HOM05D007049 ORTHO05D008896 1.9e-19 99.0 77 62.3
FAN13G1882 Fragaria x ananassa HOM05D007049 ORTHO05D008896 4.3e-19 97.8 69 69.6
Aqoxy3G02546 Aquilegia oxysepala HOM05D007049 ORTHO05D008896 9.7e-19 96.7 72 66.7
HanXRQChr04g0114811 Helianthus annuus HOM05D007049 ORTHO05D008896 2.2e-18 95.5 84 58.3
Zm00001eb026180 Zea mays HOM05D007049 ORTHO05D008896 2.2e-18 95.5 84 59.5
HPP92_017350 Vanilla planifolia HOM05D007049 ORTHO05D008896 1.4e-17 92.8 78 59.0
PSO017G7166 Papaver somniferum HOM05D007049 ORTHO05D008896 5.3e-17 90.9 65 70.8
SGA_v2.0_scaffold118G32610 Striga asiatica HOM05D007049 ORTHO05D008896 4.5e-16 87.8 61 73.8
Prupe.8G009100 Prunus persica HOM05D007049 ORTHO05D008896 1.0e-15 86.7 82 58.5
ATR0057G071 Amborella trichopoda HOM05D007049 ORTHO05D008896 3.8e-15 84.7 76 53.9
Potri.001G018100 Populus trichocarpa HOM05D007049 ORTHO05D008896 3.8e-15 84.7 56 76.8
SMO353G0203 Selaginella moellendorffii HOM05D007049 ORTHO05D008896 8.5e-15 83.6 72 56.9
SHI21473 Sapria himalayana HOM05D000105 ORTHO05D000023 3.2e-14 81.6 61 63.9
Manes.01G011600 Manihot esculenta HOM05D007049 ORTHO05D008896 5.5e-14 80.9 58 72.4
Pp3c4_6780 Physcomitrium patens HOM05D007049 ORTHO05D008896 1.2e-13 79.7 73 57.5
Mapoly0004s0187 Marchantia polymorpha HOM05D007049 ORTHO05D008896 2.5e-11 72.0 77 49.4
MD05G1008200 Malus domestica HOM05D007049 ORTHO05D008896 9.7e-11 70.1 54 66.7


User provided reference genes

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