Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.CSAI9D Arachis hypogaea HOM05D003764 ORTHO05D004356 2.2e-257 891.7 432 100.0
arahy.Tifrunner.gnm1.ann1.I18LAP Arachis hypogaea HOM05D003764 ORTHO05D004356 4.6e-255 884.0 432 98.8
Glyma.04G018600 Glycine max HOM05D003764 ORTHO05D004356 3.8e-177 625.2 431 68.9
Glyma.06G018900 Glycine max HOM05D003764 ORTHO05D004356 1.1e-176 623.6 431 68.4
VMungo1309G0568 Vigna mungo HOM05D003764 ORTHO05D004356 1.3e-172 610.1 430 68.8
Phvul.009G021800 Phaseolus vulgaris HOM05D003764 ORTHO05D004356 3.7e-172 608.6 430 68.1
Ca_15440_v3 Cicer arietinum L. HOM05D003764 ORTHO05D004356 8.6e-169 597.4 429 67.4
Lj1g0016047 Lotus japonicus HOM05D003764 ORTHO05D004356 1.6e-167 593.2 421 69.4
TPR.G38113 Trifolium pratense HOM05D003764 ORTHO05D004356 1.4e-166 590.1 427 65.8
Medtr3g115180 Medicago truncatula HOM05D003764 ORTHO05D004356 2.2e-164 582.8 427 66.3
GSVIVG01008681001 Vitis vinifera HOM05D003764 ORTHO05D004356 1.2e-162 577.0 438 63.2
Psat0s5633g0040 Pisum sativum HOM05D003764 ORTHO05D004356 1.3e-161 573.5 430 64.2
Oeu035836.1 Olea europaea HOM05D003764 ORTHO05D004356 5.0e-161 571.6 433 64.0
Haze_22757 Corylus avellana HOM05D003764 ORTHO05D004356 6.1e-159 564.7 449 62.1
Dinv31931 Davidia involucrata HOM05D003764 ORTHO05D004356 2.3e-158 562.8 443 61.6
Oeu021826.1 Olea europaea HOM05D003764 ORTHO05D004356 3.1e-158 562.4 433 62.6
FAN27G3424 Fragaria x ananassa HOM05D003764 ORTHO05D004356 2.2e-156 556.2 432 63.0
CANSAT25G3149 Cannabis sativa HOM05D003764 ORTHO05D004356 3.7e-156 555.4 436 62.4
FvH4_2g37560 Fragaria vesca HOM05D003764 ORTHO05D004356 3.2e-155 552.4 432 62.3
RcHm_v2.0_Chr6g0304171 Rosa chinensis HOM05D003764 ORTHO05D004356 4.1e-155 552.0 430 61.9
Lalb_Chr11g0061681 Lupinus albus HOM05D003764 ORTHO05D004356 7.0e-155 551.2 428 63.1
FAN15G2102 Fragaria x ananassa HOM05D003764 ORTHO05D004356 1.6e-154 550.1 432 62.0
Ciclev10001182m.g Citrus clementina HOM05D003764 ORTHO05D004356 2.7e-154 549.3 440 62.3
Nn5g30922 Nelumbo nucifera HOM05D003764 ORTHO05D004356 1.7e-153 546.6 435 60.9
Actinidia17035 Actinidia chinensis HOM05D003764 ORTHO05D004356 3.9e-153 545.4 432 61.6
QL02p013934 Quercus lobata HOM05D003764 ORTHO05D004356 3.9e-153 545.4 441 62.1
Lalb_Chr23g0265831 Lupinus albus HOM05D003764 ORTHO05D004356 8.6e-153 544.3 424 63.9
Solyc12g094550.2 Solanum lycopersicum HOM05D003764 ORTHO05D004356 1.1e-152 543.9 435 61.4
TWI56G0154 Tripterygium wilfordii HOM05D003764 ORTHO05D004356 1.9e-152 543.1 445 60.2
Nn6g31748 Nelumbo nucifera HOM05D003764 ORTHO05D004356 5.6e-152 541.6 428 61.9
CiPaw.07G139600 Carya illinoinensis HOM05D003764 ORTHO05D004356 7.3e-152 541.2 439 60.8
Eucgr.F01754 Eucalyptus grandis HOM05D003764 ORTHO05D004356 7.3e-152 541.2 440 60.7
Manes.18G006000 Manihot esculenta HOM05D003764 ORTHO05D004356 1.6e-151 540.0 442 60.4
Prupe.1G355100 Prunus persica HOM05D003764 ORTHO05D004356 2.1e-151 539.7 438 59.8
Nitab4.5_0003544g0010 Nicotiana tabacum HOM05D003764 ORTHO05D004356 6.2e-151 538.1 430 60.5
Sopen12g031450 Solanum pennellii HOM05D003764 ORTHO05D004356 6.2e-151 538.1 434 60.6
Peaxi162Scf00064g01131 Petunia axillaris HOM05D003764 ORTHO05D004356 1.1e-150 537.3 409 62.3
Thecc.08G057700 Theobroma cacao HOM05D003764 ORTHO05D004356 1.1e-150 537.3 439 58.3
CANSAT80G1902 Cannabis sativa HOM05D003764 ORTHO05D004356 1.4e-150 537.0 440 60.5
MD08G1003100 Malus domestica HOM05D003764 ORTHO05D004356 1.4e-150 537.0 439 60.6
Duzib116G0421 Durio zibethinus HOM05D003764 ORTHO05D004356 2.3e-150 536.2 436 59.4
vmacro21825 Vaccinium macrocarpon HOM05D003764 ORTHO05D004356 4.0e-150 535.4 435 59.5
PGSC0003DMG400029320 Solanum tuberosum HOM05D003764 ORTHO05D004356 5.2e-150 535.0 430 60.9
Manes.05G135000 Manihot esculenta HOM05D003764 ORTHO05D004356 6.8e-150 534.6 421 61.3
Actinidia15487 Actinidia chinensis HOM05D003764 ORTHO05D004356 1.2e-149 533.9 430 60.5
Migut.C00953 Erythranthe guttata HOM05D003764 ORTHO05D004356 5.8e-149 531.6 432 59.7
Rhsim06G0008200 Rhododendron simsii HOM05D003764 ORTHO05D004356 7.5e-149 531.2 410 62.4
PGSC0003DMG400009974 Solanum tuberosum HOM05D003764 ORTHO05D004356 9.8e-149 530.8 426 59.6
Nitab4.5_0000699g0100 Nicotiana tabacum HOM05D003764 ORTHO05D004356 8.3e-148 527.7 364 67.0
Migut.C00949 Erythranthe guttata HOM05D003764 ORTHO05D004356 1.1e-147 527.3 354 68.1
Nitab4.5_0000588g0130 Nicotiana tabacum HOM05D003764 ORTHO05D004356 1.1e-147 527.3 447 59.7
Potri.005G249600 Populus trichocarpa HOM05D003764 ORTHO05D004356 1.9e-147 526.6 442 59.5
SGA_v2.0_scaffold108G30849 Striga asiatica HOM05D003764 ORTHO05D004356 2.4e-147 526.2 429 59.2
Peaxi162Scf00104g00322 Petunia axillaris HOM05D003764 ORTHO05D004356 4.1e-147 525.4 414 61.6
TAR628G1614 Trochodendron aralioides HOM05D003764 ORTHO05D004356 9.2e-147 524.2 347 69.2
PGR031G0670 Punica granatum HOM05D003764 ORTHO05D004356 1.2e-146 523.9 416 60.8
Sabra05G0193100 Salix brachista HOM05D003764 ORTHO05D004356 1.6e-146 523.5 438 60.5
SalBow7G4127 Salvia bowleyana HOM05D003764 ORTHO05D004356 3.5e-146 522.3 454 57.7
MSTRG.1112 Avicennia marina HOM05D003764 ORTHO05D004356 4.6e-146 521.9 429 60.4
MSTRG.25298 Avicennia marina HOM05D003764 ORTHO05D004356 7.8e-146 521.2 427 60.7
Gorai.002G118500 Gossypium raimondii HOM05D003764 ORTHO05D004356 1.3e-145 520.4 431 58.9
Gohir.D01G093100 Gossypium hirsutum HOM05D003764 ORTHO05D004356 6.6e-145 518.1 431 58.7
Lj4A804T73 Lonicera japonica HOM05D003764 ORTHO05D004356 8.6e-145 517.7 428 60.5
SGA_v2.0_scaffold108G30854 Striga asiatica HOM05D003764 ORTHO05D004356 1.9e-144 516.5 341 69.2
Solyc04g082280.3 Solanum lycopersicum HOM05D003764 ORTHO05D004356 2.5e-144 516.2 350 67.4
Sopen04g035900 Solanum pennellii HOM05D003764 ORTHO05D004356 4.3e-144 515.4 350 67.1
Sabra02G0008800 Salix brachista HOM05D003764 ORTHO05D004356 1.6e-143 513.5 449 57.0
COL.COLO4_03998 Corchorus olitorius HOM05D003764 ORTHO05D004356 2.1e-143 513.1 422 58.8
PSO210G7283 Papaver somniferum HOM05D003764 ORTHO05D004356 2.1e-143 513.1 461 56.6
Cc10_g00740 Coffea canephora HOM05D003764 ORTHO05D004356 3.6e-143 512.3 420 60.2
Potri.002G011400 Populus trichocarpa HOM05D003764 ORTHO05D004356 6.2e-143 511.5 434 58.8
SHI08003 Sapria himalayana HOM05D003764 ORTHO05D004356 6.2e-143 511.5 407 59.5
Gorai.009G188300 Gossypium raimondii HOM05D003764 ORTHO05D004356 2.3e-142 509.6 430 57.4
AT1G76250 Arabidopsis thaliana HOM05D003764 ORTHO05D004356 3.1e-142 509.2 421 58.7
Thhalv10018564m.g Eutrema salsugineum HOM05D003764 ORTHO05D004356 3.1e-142 509.2 428 59.1
Gohir.A05G180000 Gossypium hirsutum HOM05D003764 ORTHO05D004356 3.1e-142 509.2 430 57.2
Lsat_1_v5_gn_2_6240 Lactuca sativa HOM05D003764 ORTHO05D004356 8.9e-142 507.7 432 57.4
PSO170G5992 Papaver somniferum HOM05D003764 ORTHO05D004356 8.9e-142 507.7 448 56.7
CSS0020809 Camellia sinensis var. sinensis HOM05D003764 ORTHO05D004356 2.6e-141 506.1 393 63.1
BcaB02g07057 Brassica carinata HOM05D003764 ORTHO05D004356 4.4e-141 505.4 409 59.2
ClCG11G018640 Citrullus lanatus HOM05D003764 ORTHO05D004356 7.5e-141 504.6 426 58.5
BcaC08g47274 Brassica carinata HOM05D003764 ORTHO05D004356 9.9e-141 504.2 423 59.3
C06p50220 Brassica napus HOM05D003764 ORTHO05D004356 9.9e-141 504.2 423 59.3
BolC6t40061H Brassica oleracea HOM05D003764 ORTHO05D004356 9.9e-141 504.2 423 59.3
SGA_v2.0_scaffold275G46585 Striga asiatica HOM05D003764 ORTHO05D004356 9.9e-141 504.2 419 59.4
Aqoxy6G01751 Aquilegia oxysepala HOM05D003764 ORTHO05D004356 1.7e-140 503.4 423 57.7
A07p28580 Brassica napus HOM05D003764 ORTHO05D004356 3.7e-140 502.3 407 59.7
Sp5g31390 Schrenkiella parvula HOM05D003764 ORTHO05D004356 3.7e-140 502.3 437 56.5
BraA07t30497Z Brassica rapa HOM05D003764 ORTHO05D004356 4.9e-140 501.9 407 59.7
MBI08_g19981_MAGBIO Magnolia biondii HOM05D003764 ORTHO05D004356 6.4e-140 501.5 414 60.6
CsaV3_4G037170 Cucumis sativus L. HOM05D003764 ORTHO05D004356 8.3e-140 501.1 420 57.9
Gohir.A01G106600 Gossypium hirsutum HOM05D003764 ORTHO05D004356 8.3e-140 501.1 431 57.1
Carub.0002s2314 Capsella rubella HOM05D003764 ORTHO05D004356 1.1e-139 500.7 416 58.2
A07p41820 Brassica napus HOM05D003764 ORTHO05D004356 2.4e-139 499.6 418 57.9
Eucgr.F03548 Eucalyptus grandis HOM05D003764 ORTHO05D004356 2.4e-139 499.6 347 65.4
HanXRQChr14g0428241 Helianthus annuus HOM05D003764 ORTHO05D004356 3.2e-139 499.2 420 56.7
Gohir.D05G183000 Gossypium hirsutum HOM05D003764 ORTHO05D004356 5.4e-139 498.4 430 56.7
BraA07t31712Z Brassica rapa HOM05D003764 ORTHO05D004356 9.2e-139 497.7 418 58.1
BcaC08g45536 Brassica carinata HOM05D003764 ORTHO05D004356 1.6e-138 496.9 407 58.5
C06p32120 Brassica napus HOM05D003764 ORTHO05D004356 1.6e-138 496.9 407 58.5
BolC6t38338H Brassica oleracea HOM05D003764 ORTHO05D004356 1.6e-138 496.9 407 58.5
CARHR069810 Cardamine hirsuta HOM05D003764 ORTHO05D004356 7.8e-138 494.6 346 66.2
Sed0020753 Sechium edule HOM05D003764 ORTHO05D004356 1.0e-137 494.2 413 57.4
MELO3C017015.2 Cucumis melo HOM05D003764 ORTHO05D004356 2.3e-137 493.0 399 58.9
AUR62043557 Chenopodium quinoa HOM05D003764 ORTHO05D004356 3.9e-137 492.3 347 64.3
AUR62036887 Chenopodium quinoa HOM05D003764 ORTHO05D004356 5.1e-137 491.9 421 57.0
BcaC08g47123 Brassica carinata HOM05D003764 ORTHO05D004356 1.1e-136 490.7 423 57.7
SGA_v2.0_scaffold275G46588 Striga asiatica HOM05D003764 ORTHO05D004356 3.3e-136 489.2 332 67.8
Duzib093G1245 Durio zibethinus HOM05D003764 ORTHO05D004356 5.6e-136 488.4 418 57.4
Hund01762 Selenicereus undatus HOM05D003764 ORTHO05D004356 7.3e-136 488.0 437 55.8
Aa31LG4G6340 Aethionema arabicum HOM05D003764 ORTHO05D004356 1.6e-135 486.9 437 54.2
Ah.00g000380 Amaranthus hybridus HOM05D003764 ORTHO05D004356 3.6e-135 485.7 345 64.3
Sc02g0009060 Simmondsia chinensis HOM05D003764 ORTHO05D004356 1.2e-133 480.7 424 55.9
EL10Ac1g01980 Beta vulgaris HOM05D003764 ORTHO05D004356 2.6e-133 479.6 427 54.8
unitig_747.g21519 Utricularia gibba HOM05D003764 ORTHO05D004356 1.6e-130 470.3 379 58.8
HanXRQChr15g0491851 Helianthus annuus HOM05D003764 ORTHO05D004356 6.0e-130 468.4 348 62.4
Peaxi162Scf00064g01016 Petunia axillaris HOM05D003764 ORTHO05D004356 1.3e-129 467.2 358 64.0
PSO170G6284 Papaver somniferum HOM05D003764 ORTHO05D004356 3.3e-128 462.6 410 56.6
CDE06G1096 Ceratophyllum demersum HOM05D003764 ORTHO05D004356 2.8e-127 459.5 347 59.9
PSO017G4841 Papaver somniferum HOM05D003764 ORTHO05D004356 9.0e-126 454.5 428 54.0
PSO170G2421 Papaver somniferum HOM05D003764 ORTHO05D004356 5.8e-125 451.8 442 52.5
Cfa014062 Carpinus fangiana HOM05D003764 ORTHO05D004356 7.6e-125 451.4 461 52.9
ATR0106G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 1.3e-124 450.7 430 51.6
PSO170G4333 Papaver somniferum HOM05D003764 ORTHO05D004356 2.2e-124 449.9 431 53.4
PSO017G3905 Papaver somniferum HOM05D003764 ORTHO05D004356 8.4e-124 448.0 422 53.8
Sabra02G0008700 Salix brachista HOM05D003764 ORTHO05D004356 1.1e-123 447.6 433 54.5
PSO170G1328 Papaver somniferum HOM05D003764 ORTHO05D004356 2.4e-123 446.4 350 60.9
PSO017G1698 Papaver somniferum HOM05D003764 ORTHO05D004356 2.1e-122 443.4 405 54.8
PSO017G1302 Papaver somniferum HOM05D003764 ORTHO05D004356 2.7e-122 443.0 413 55.2
HPP92_026195 Vanilla planifolia HOM05D003764 ORTHO05D004356 2.7e-122 443.0 343 59.8
PSO017G3919 Papaver somniferum HOM05D003764 ORTHO05D004356 2.3e-121 439.9 439 51.9
PSO017G1063 Papaver somniferum HOM05D003764 ORTHO05D004356 3.3e-120 436.0 421 52.7
PSO104G0104 Papaver somniferum HOM05D003764 ORTHO05D004356 3.3e-120 436.0 423 53.2
PSO170G3515 Papaver somniferum HOM05D003764 ORTHO05D004356 3.3e-120 436.0 414 54.8
HPP92_022192 Vanilla planifolia HOM05D003764 ORTHO05D004356 2.8e-119 433.0 386 54.1
HPP92_022186 Vanilla planifolia HOM05D003764 ORTHO05D004356 1.4e-118 430.6 386 54.1
THA.LOC104813245 Tarenaya hassleriana HOM05D003764 ORTHO05D004356 1.5e-117 427.2 448 52.2
Cpa.g.sc26.208 Carica papaya HOM05D003764 ORTHO05D004356 4.5e-117 425.6 289 65.7
HPP92_026182 Vanilla planifolia HOM05D003764 ORTHO05D004356 8.7e-113 411.4 289 64.7
SEGI_06086 Sequoiadendron giganteum HOM05D003764 ORTHO05D004356 2.1e-111 406.8 340 56.5
MD15G1002800 Malus domestica HOM05D003764 ORTHO05D004356 2.4e-110 403.3 250 73.6
SEGI_23487 Sequoiadendron giganteum HOM05D003764 ORTHO05D004356 1.4e-107 394.0 341 54.5
DCAR_013910 Daucus carota HOM05D003764 ORTHO05D004356 1.9e-104 383.6 459 46.6
unitig_0.g1266 Utricularia gibba HOM05D003764 ORTHO05D004356 4.8e-103 379.0 372 49.7
unitig_699.g19216 Utricularia gibba HOM05D003764 ORTHO05D004356 1.8e-102 377.1 401 48.1
unitig_747.g21882 Utricularia gibba HOM05D003764 ORTHO05D004356 3.1e-102 376.3 434 44.7
CDE07G0072 Ceratophyllum demersum HOM05D003764 ORTHO05D004356 3.4e-101 372.9 305 56.4
TWI12G0241 Tripterygium wilfordii HOM05D003764 ORTHO05D004356 1.1e-99 367.9 251 64.5
Pp3c14_15070 Physcomitrium patens HOM05D003764 ORTHO05D004356 1.1e-96 357.8 341 49.9
unitig_699.g19217 Utricularia gibba HOM05D003764 ORTHO05D004356 1.4e-94 350.9 401 46.1
Sabra02G0009000 Salix brachista HOM05D003764 ORTHO05D004356 1.8e-94 350.5 240 65.8
Mapoly0049s0068 Marchantia polymorpha HOM05D003764 ORTHO05D004356 3.4e-93 346.3 353 47.9
AagrBONN_evm.TU.Sc2ySwM_228.3221 Anthoceros agrestis HOM05D003764 ORTHO05D004356 4.5e-93 345.9 341 47.8
Mapoly0006s0188 Marchantia polymorpha HOM05D003764 ORTHO05D004356 1.7e-92 344.0 340 46.5
A09p51670 Brassica napus HOM05D003764 ORTHO05D004356 5.0e-92 342.4 240 65.4
SMO141G0079 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 2.1e-90 337.0 349 48.4
Atru.chr13.152 Acer truncatum HOM05D003764 ORTHO05D004356 1.5e-88 330.9 306 57.5
HanXRQChr14g0428221 Helianthus annuus HOM05D003764 ORTHO05D004356 2.0e-88 330.5 237 61.2
Zm00001eb209300 Zea mays HOM05D003764 ORTHO05D004356 3.4e-85 319.7 415 43.9
ECA238G1445 Erigeron canadensis HOM05D003764 ORTHO05D004356 9.4e-83 311.6 237 57.4
Pp3c17_5840 Physcomitrium patens HOM05D003764 ORTHO05D004356 1.5e-80 304.3 427 39.6
AagrBONN_evm.TU.Sc2ySwM_368.3397 Anthoceros agrestis HOM05D003764 ORTHO05D004356 6.3e-79 298.9 298 47.7
SMO364G0266 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 4.5e-77 292.7 346 41.6
Pp3c2_5370 Physcomitrium patens HOM05D003764 ORTHO05D004356 2.5e-75 287.0 344 41.9
SMO147G0236 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 2.1e-74 283.9 350 41.4
Pp3c1_32600 Physcomitrium patens HOM05D003764 ORTHO05D004356 8.0e-74 282.0 339 42.2
unitig_52.g17754 Utricularia gibba HOM05D003764 ORTHO05D004356 2.2e-71 273.9 240 51.7
Pp3c17_7390 Physcomitrium patens HOM05D003764 ORTHO05D004356 4.8e-71 272.7 338 40.5
SMO367G1018 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 4.5e-69 266.2 344 39.0
CBR_g3019 Chara braunii HOM05D003764 ORTHO05D004356 7.7e-61 238.8 353 38.8
Aqoxy6G01618 Aquilegia oxysepala HOM05D003764 ORTHO05D004356 9.8e-40 168.7 149 59.1
CBR_g9154 Chara braunii HOM05D003764 ORTHO05D004356 8.6e-36 155.6 416 28.1
DCAR_010127 Daucus carota HOM05D003764 ORTHO05D004356 1.6e-34 151.4 154 48.7
SMO170G0013 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 3.2e-22 110.5 120 44.2
Cfa013034 Carpinus fangiana HOM05D003764 ORTHO05D004356 2.1e-21 107.8 85 52.9
ATR0756G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 2.7e-21 107.5 112 44.6
Potri.012G136700 Populus trichocarpa HOM05D003764 ORTHO05D004356 7.6e-16 89.4 138 45.7
Os02g0119600 Oryza sativa ssp. japonica HOM05D003764 ORTHO05D004356 1.7e-15 88.2 77 45.5
ATR0276G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 4.9e-15 86.7 98 40.8
ATR0138G019 Amborella trichopoda HOM05D003764 ORTHO05D004356 1.1e-11 75.5 120 37.5
Nn1g01454 Nelumbo nucifera HOM05D003764 ORTHO05D004356 8.4e-07 59.3 36 75.0


User provided reference genes

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