Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.54ECHP Arachis hypogaea HOM05D005851 ORTHO05D007137 1.1e-44 183.3 124 100.0
arahy.Tifrunner.gnm1.ann1.CS7A8V Arachis hypogaea HOM05D005851 ORTHO05D007137 1.1e-44 183.3 124 100.0
arahy.Tifrunner.gnm1.ann1.Q2BFW3 Arachis hypogaea HOM05D005851 ORTHO05D007137 4.6e-43 177.9 124 92.7
arahy.Tifrunner.gnm1.ann1.IPBJ4Y Arachis hypogaea HOM05D005851 ORTHO05D007137 2.2e-29 132.5 124 83.1
arahy.Tifrunner.gnm1.ann1.6D2PAS Arachis hypogaea HOM05D005851 ORTHO05D007137 5.0e-13 78.2 108 65.7
arahy.Tifrunner.gnm1.ann1.BUTP6K Arachis hypogaea HOM05D005851 ORTHO05D007137 3.6e-11 72.0 41 92.7
arahy.Tifrunner.gnm1.ann1.KEJN3W Arachis hypogaea HOM05D005851 ORTHO05D007137 3.6e-11 72.0 41 92.7
Medtr5g011460 Medicago truncatula HOM05D005851 ORTHO05D007137 9.8e-09 63.9 41 82.9
Medtr5g011478 Medicago truncatula HOM05D005851 ORTHO05D007137 2.2e-08 62.8 43 76.7
Psat2g180400 Pisum sativum HOM05D005851 ORTHO05D007137 2.2e-08 62.8 41 80.5
Lalb_Chr16g0379871 Lupinus albus HOM05D005851 ORTHO05D007137 3.7e-08 62.0 41 85.4
TPR.G19565 Trifolium pratense HOM05D005851 ORTHO05D007137 4.9e-08 61.6 41 80.5
CiPaw.11G145200 Carya illinoinensis HOM05D005851 ORTHO05D007137 1.4e-07 60.1 41 78.0
SGA_v2.0_scaffold144G35989 Striga asiatica HOM05D005851 ORTHO05D007137 1.4e-07 60.1 39 82.1
Hma1.2p1_0367F.1_g137205 Hydrangea macrophylla HOM05D005851 ORTHO05D007137 2.4e-07 59.3 41 78.0
MD06G1068000 Malus domestica HOM05D005851 ORTHO05D007137 2.4e-07 59.3 41 78.0
QL12p015621 Quercus lobata HOM05D005851 ORTHO05D007137 3.1e-07 58.9 39 79.5
Zm00001eb103020 Zea mays HOM05D005851 ORTHO05D007137 4.1e-07 58.5 38 76.3
TAR629G1703 Trochodendron aralioides HOM05D005851 ORTHO05D007137 5.4e-07 58.2 41 75.6
GSVIVG01019923001 Vitis vinifera HOM05D005851 ORTHO05D007137 5.4e-07 58.2 41 75.6
Atru.chr9.1473 Acer truncatum HOM05D005851 ORTHO05D007137 1.2e-06 57.0 41 73.2
Ciclev10024430m.g Citrus clementina HOM05D005851 ORTHO05D007137 1.2e-06 57.0 41 75.6
SalBow1G3546 Salvia bowleyana HOM05D005851 ORTHO05D007137 1.2e-06 57.0 39 74.4
CANSAT95G0001 Cannabis sativa HOM05D005851 ORTHO05D007137 1.6e-06 56.6 41 73.2
Peaxi162Scf00620g00019 Petunia axillaris HOM05D005851 ORTHO05D007137 1.6e-06 56.6 41 73.2
MELO3C013999.2 Cucumis melo HOM05D005851 ORTHO05D007137 2.0e-06 56.2 41 73.2
CsaV3_3G003320 Cucumis sativus L. HOM05D005851 ORTHO05D007137 2.0e-06 56.2 41 73.2
MD04G1076900 Malus domestica HOM05D005851 ORTHO05D007137 2.0e-06 56.2 41 80.5
PGR042G2385 Punica granatum HOM05D005851 ORTHO05D007137 2.0e-06 56.2 41 68.3
FAN08G3582 Fragaria x ananassa HOM05D005851 ORTHO05D007137 2.7e-06 55.8 41 73.2
FAN13G0774 Fragaria x ananassa HOM05D005851 ORTHO05D007137 2.7e-06 55.8 41 73.2
RcHm_v2.0_Chr7g0200451 Rosa chinensis HOM05D005851 ORTHO05D007137 2.7e-06 55.8 41 73.2
vmacro00216 Vaccinium macrocarpon HOM05D005851 ORTHO05D007137 2.7e-06 55.8 41 73.2
CSS0019536 Camellia sinensis var. sinensis HOM05D005851 ORTHO05D007137 3.5e-06 55.5 39 74.4
HanXRQChr09g0246661 Helianthus annuus HOM05D005851 ORTHO05D007137 3.5e-06 55.5 37 78.4
Os04g0379400 Oryza sativa ssp. japonica HOM05D005851 ORTHO05D007137 3.5e-06 55.5 39 71.8
MSTRG.1924 Avicennia marina HOM05D005851 ORTHO05D007137 4.5e-06 55.1 41 68.3
FAN04G1422 Fragaria x ananassa HOM05D005851 ORTHO05D007137 4.5e-06 55.1 41 70.7
Glyma.01G213300 Glycine max HOM05D005851 ORTHO05D007137 4.5e-06 55.1 35 80.0
Potri.001G114800 Populus trichocarpa HOM05D005851 ORTHO05D007137 4.5e-06 55.1 41 73.2
TWI60G0484 Tripterygium wilfordii HOM05D005851 ORTHO05D007137 4.5e-06 55.1 41 73.2
FvH4_5g00940 Fragaria vesca HOM05D005851 ORTHO05D007137 5.9e-06 54.7 41 70.7
MBI12_g34479_MAGBIO Magnolia biondii HOM05D005851 ORTHO05D007137 5.9e-06 54.7 41 70.7
Phvul.002G151800 Phaseolus vulgaris HOM05D005851 ORTHO05D007137 5.9e-06 54.7 33 87.9
Rhsim05G0172500 Rhododendron simsii HOM05D005851 ORTHO05D007137 5.9e-06 54.7 41 70.7
Actinidia14484 Actinidia chinensis HOM05D005851 ORTHO05D007137 7.7e-06 54.3 41 70.7
Cpa.g.sc29.62 Carica papaya HOM05D005851 ORTHO05D007137 7.7e-06 54.3 39 74.4
Sabra01G0087800 Salix brachista HOM05D005851 ORTHO05D007137 7.7e-06 54.3 41 73.2


User provided reference genes

Program Settings