Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.CPU7B3 Arachis hypogaea HOM05D006410 ORTHO05D007914 1.0e-114 416.8 219 100.0
arahy.Tifrunner.gnm1.ann1.LV5WBC Arachis hypogaea HOM05D006410 ORTHO05D007914 1.8e-69 266.5 261 61.3
arahy.Tifrunner.gnm1.ann1.K0FU58 Arachis hypogaea HOM05D006410 ORTHO05D007914 3.9e-69 265.4 260 61.2
arahy.Tifrunner.gnm1.ann1.2Y9ZDG Arachis hypogaea HOM05D006410 ORTHO05D007914 3.7e-67 258.8 184 77.7
arahy.Tifrunner.gnm1.ann1.PEH6CG Arachis hypogaea HOM05D006410 ORTHO05D007914 1.4e-58 230.3 225 61.3
TPR.G24331 Trifolium pratense HOM05D006410 ORTHO05D007914 6.9e-58 228.0 192 63.5
Glyma.18G212900 Glycine max HOM05D006410 ORTHO05D007914 2.6e-57 226.1 191 65.4
Medtr7g073510 Medicago truncatula HOM05D006410 ORTHO05D007914 2.6e-57 226.1 192 63.5
arahy.Tifrunner.gnm1.ann1.A09QMR Arachis hypogaea HOM05D006410 ORTHO05D007914 5.9e-57 224.9 293 51.9
Glyma.09G273700 Glycine max HOM05D006410 ORTHO05D007914 7.6e-57 224.6 189 65.6
Lj1g0017463 Lotus japonicus HOM05D006410 ORTHO05D007914 1.0e-56 224.2 191 64.4
VMungo1383G1039 Vigna mungo HOM05D006410 ORTHO05D007914 1.3e-56 223.8 191 65.4
Psat3g118640 Pisum sativum HOM05D006410 ORTHO05D007914 1.2e-54 217.2 192 60.9
Lalb_Chr03g0043841 Lupinus albus HOM05D006410 ORTHO05D007914 6.7e-53 211.5 192 62.0
Phvul.008G081500 Phaseolus vulgaris HOM05D006410 ORTHO05D007914 1.1e-50 204.1 186 61.3
QL07p031892 Quercus lobata HOM05D006410 ORTHO05D007914 3.3e-44 182.6 191 52.9
Dinv16966 Davidia involucrata HOM05D006410 ORTHO05D007914 2.4e-42 176.4 193 53.4
CiPaw.10G165500 Carya illinoinensis HOM05D006410 ORTHO05D007914 6.9e-42 174.9 194 51.0
Haze_22079 Corylus avellana HOM05D006410 ORTHO05D007914 6.9e-42 174.9 191 51.3
Lsat_1_v5_gn_9_39501 Lactuca sativa HOM05D006410 ORTHO05D007914 9.1e-42 174.5 193 52.8
Cfa013491 Carpinus fangiana HOM05D006410 ORTHO05D007914 4.5e-41 172.2 191 50.8
ECA247G0827 Erigeron canadensis HOM05D006410 ORTHO05D007914 1.4e-39 167.2 193 49.7
Prupe.6G295400 Prunus persica HOM05D006410 ORTHO05D007914 2.5e-39 166.4 192 49.5
RcHm_v2.0_Chr3g0460291 Rosa chinensis HOM05D006410 ORTHO05D007914 2.5e-39 166.4 192 51.0
Atru.chr8.91 Acer truncatum HOM05D006410 ORTHO05D007914 1.6e-38 163.7 192 49.5
Ciclev10012138m.g Citrus clementina HOM05D006410 ORTHO05D007914 1.6e-38 163.7 192 48.4
Potri.006G109500 Populus trichocarpa HOM05D006410 ORTHO05D007914 3.6e-38 162.5 198 49.0
FAN09G0831 Fragaria x ananassa HOM05D006410 ORTHO05D007914 4.7e-38 162.2 192 50.5
Ca_07767_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 1.0e-37 161.0 92 85.9
FAN02G1808 Fragaria x ananassa HOM05D006410 ORTHO05D007914 1.0e-37 161.0 192 49.5
Sabra06G0085200 Salix brachista HOM05D006410 ORTHO05D007914 1.4e-37 160.6 194 47.9
COL.COLO4_03931 Corchorus olitorius HOM05D006410 ORTHO05D007914 2.3e-37 159.8 190 47.4
Eucgr.J00376 Eucalyptus grandis HOM05D006410 ORTHO05D007914 2.3e-37 159.8 191 49.7
FAN05G4204 Fragaria x ananassa HOM05D006410 ORTHO05D007914 2.3e-37 159.8 192 49.5
Duzib212G0115 Durio zibethinus HOM05D006410 ORTHO05D007914 3.0e-37 159.5 192 45.8
FvH4_6g09660 Fragaria vesca HOM05D006410 ORTHO05D007914 3.0e-37 159.5 192 49.5
FAN14G0316 Fragaria x ananassa HOM05D006410 ORTHO05D007914 3.0e-37 159.5 192 49.5
MD12G1190300 Malus domestica HOM05D006410 ORTHO05D007914 3.0e-37 159.5 194 49.0
CAN.G1018.3 Capsicum annuum HOM05D006410 ORTHO05D007914 3.9e-37 159.1 197 47.2
Eucgr.H04867 Eucalyptus grandis HOM05D006410 ORTHO05D007914 5.2e-37 158.7 191 49.2
ClCG04G006320 Citrullus lanatus HOM05D006410 ORTHO05D007914 6.7e-37 158.3 192 50.0
Nitab4.5_0000381g0170 Nicotiana tabacum HOM05D006410 ORTHO05D007914 6.7e-37 158.3 193 47.7
Rhsim05G0231700 Rhododendron simsii HOM05D006410 ORTHO05D007914 8.8e-37 157.9 201 47.8
TAR633G1493 Trochodendron aralioides HOM05D006410 ORTHO05D007914 8.8e-37 157.9 193 49.2
CsaV3_4G027230 Cucumis sativus L. HOM05D006410 ORTHO05D007914 1.1e-36 157.5 192 48.4
Eucgr.G01626 Eucalyptus grandis HOM05D006410 ORTHO05D007914 1.5e-36 157.1 191 48.7
MD04G1175900 Malus domestica HOM05D006410 ORTHO05D007914 1.5e-36 157.1 191 48.7
Solyc10g085690.2 Solanum lycopersicum HOM05D006410 ORTHO05D007914 1.5e-36 157.1 195 45.6
Eucgr.A00566 Eucalyptus grandis HOM05D006410 ORTHO05D007914 2.0e-36 156.8 191 48.7
GSVIVG01030169001 Vitis vinifera HOM05D006410 ORTHO05D007914 2.0e-36 156.8 193 49.2
Sopen10g035110 Solanum pennellii HOM05D006410 ORTHO05D007914 2.6e-36 156.4 195 45.1
Thecc.04G150000 Theobroma cacao HOM05D006410 ORTHO05D007914 2.6e-36 156.4 193 46.1
HanXRQChr15g0464751 Helianthus annuus HOM05D006410 ORTHO05D007914 3.3e-36 156.0 193 49.2
Eucgr.G00130 Eucalyptus grandis HOM05D006410 ORTHO05D007914 4.4e-36 155.6 191 48.7
Actinidia20795 Actinidia chinensis HOM05D006410 ORTHO05D007914 5.7e-36 155.2 193 46.6
Hma1.2p1_0537F.1_g174300 Hydrangea macrophylla HOM05D006410 ORTHO05D007914 4.8e-35 152.1 193 47.7
Nitab4.5_0009611g0010 Nicotiana tabacum HOM05D006410 ORTHO05D007914 6.3e-35 151.8 195 47.2
TWI77G0542 Tripterygium wilfordii HOM05D006410 ORTHO05D007914 6.3e-35 151.8 196 48.5
Eucgr.K01292 Eucalyptus grandis HOM05D006410 ORTHO05D007914 8.2e-35 151.4 194 46.9
Manes.09G123200 Manihot esculenta HOM05D006410 ORTHO05D007914 1.4e-34 150.6 193 48.2
Peaxi162Scf00146g01120 Petunia axillaris HOM05D006410 ORTHO05D007914 4.1e-34 149.1 197 45.7
Ca_07774_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 1.2e-33 147.5 116 68.1
PGR004G0643 Punica granatum HOM05D006410 ORTHO05D007914 4.5e-33 145.6 192 45.3
Nn2g10260 Nelumbo nucifera HOM05D006410 ORTHO05D007914 1.0e-32 144.4 184 42.9
Lj3A940G60 Lonicera japonica HOM05D006410 ORTHO05D007914 1.3e-32 144.1 92 73.9
CDE04G0338 Ceratophyllum demersum HOM05D006410 ORTHO05D007914 2.2e-32 143.3 190 43.7
Cc06_g00300 Coffea canephora HOM05D006410 ORTHO05D007914 5.0e-32 142.1 194 45.4
ATR1127G206 Amborella trichopoda HOM05D006410 ORTHO05D007914 6.5e-32 141.7 188 43.6
vmacro20378 Vaccinium macrocarpon HOM05D006410 ORTHO05D007914 6.5e-32 141.7 91 73.6
AUR62029781 Chenopodium quinoa HOM05D006410 ORTHO05D007914 1.1e-31 141.0 196 44.9
Hund19754 Selenicereus undatus HOM05D006410 ORTHO05D007914 2.5e-31 139.8 191 45.0
EL10Ac7g17116 Beta vulgaris HOM05D006410 ORTHO05D007914 3.2e-31 139.4 192 44.8
PSO339G1476 Papaver somniferum HOM05D006410 ORTHO05D007914 3.2e-31 139.4 193 42.5
Zm00001eb395200 Zea mays HOM05D006410 ORTHO05D007914 4.2e-31 139.0 194 43.3
CARHR133250 Cardamine hirsuta HOM05D006410 ORTHO05D007914 7.2e-31 138.3 102 66.7
PSO384G4459 Papaver somniferum HOM05D006410 ORTHO05D007914 1.6e-30 137.1 193 42.0
Carub.0004s2056 Capsella rubella HOM05D006410 ORTHO05D007914 3.6e-30 136.0 102 64.7
Aqoxy4G03284 Aquilegia oxysepala HOM05D006410 ORTHO05D007914 6.1e-30 135.2 186 44.1
BcaB01g03675 Brassica carinata HOM05D006410 ORTHO05D007914 6.1e-30 135.2 102 64.7
Thhalv10017800m.g Eutrema salsugineum HOM05D006410 ORTHO05D007914 6.1e-30 135.2 102 65.7
Sc07g0005960 Simmondsia chinensis HOM05D006410 ORTHO05D007914 6.1e-30 135.2 92 72.8
AL4G35850 Arabidopsis lyrata HOM05D006410 ORTHO05D007914 1.8e-29 133.7 102 64.7
AT2G38570 Arabidopsis thaliana HOM05D006410 ORTHO05D007914 3.0e-29 132.9 102 64.7
Gohir.A02G002700 Gossypium hirsutum HOM05D006410 ORTHO05D007914 3.0e-29 132.9 92 68.5
SGA_v2.0_scaffold85G26601 Striga asiatica HOM05D006410 ORTHO05D007914 3.0e-29 132.9 191 40.8
THA.LOC104806212 Tarenaya hassleriana HOM05D006410 ORTHO05D007914 3.0e-29 132.9 92 68.5
A03p21390 Brassica napus HOM05D006410 ORTHO05D007914 4.0e-29 132.5 102 62.7
Gohir.D02G003000 Gossypium hirsutum HOM05D006410 ORTHO05D007914 4.0e-29 132.5 92 67.4
BraA03t11374Z Brassica rapa HOM05D006410 ORTHO05D007914 6.7e-29 131.7 102 62.7
Gorai.005G003500 Gossypium raimondii HOM05D006410 ORTHO05D007914 6.7e-29 131.7 92 66.3
BcaC01g05529 Brassica carinata HOM05D006410 ORTHO05D007914 8.8e-29 131.3 102 61.8
BolC3t14920H Brassica oleracea HOM05D006410 ORTHO05D007914 8.8e-29 131.3 102 61.8
C03p25260 Brassica napus HOM05D006410 ORTHO05D007914 4.4e-28 129.0 102 60.8
SalBow5G5142 Salvia bowleyana HOM05D006410 ORTHO05D007914 9.7e-28 127.9 189 41.8
CANSAT21G1321 Cannabis sativa HOM05D006410 ORTHO05D007914 1.3e-27 127.5 187 45.5
Sp4g20910 Schrenkiella parvula HOM05D006410 ORTHO05D007914 1.3e-27 127.5 102 60.8
MSTRG.5489 Avicennia marina HOM05D006410 ORTHO05D007914 1.7e-27 127.1 92 63.0
SalBow5G0627 Salvia bowleyana HOM05D006410 ORTHO05D007914 9.1e-26 121.3 186 41.4
HPP92_000776 Vanilla planifolia HOM05D006410 ORTHO05D007914 9.1e-26 121.3 92 62.0
HPP92_026801 Vanilla planifolia HOM05D006410 ORTHO05D007914 1.2e-25 120.9 92 62.0
CSS0050432 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 2.9e-24 116.3 192 41.7
Cpa.g.sc86.77 Carica papaya HOM05D006410 ORTHO05D007914 1.6e-22 110.5 71 73.2
SEGI_21416 Sequoiadendron giganteum HOM05D006410 ORTHO05D007914 8.0e-22 108.2 90 51.1
MELO3C025226.2 Cucumis melo HOM05D006410 ORTHO05D007914 2.3e-21 106.7 68 72.1
Os03g0334100 Oryza sativa ssp. japonica HOM05D006410 ORTHO05D007914 2.6e-20 103.2 72 69.4
CSS0030024 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 9.8e-20 101.3 155 42.6
BcaB01g00971 Brassica carinata HOM05D006410 ORTHO05D007914 2.2e-19 100.1 125 47.2
AagrBONN_evm.TU.Sc2ySwM_344.4011 Anthoceros agrestis HOM05D006410 ORTHO05D007914 5.9e-17 92.0 95 46.3
Duzib151G0462 Durio zibethinus HOM05D006410 ORTHO05D007914 1.3e-16 90.9 61 72.1
CSS0025367 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 3.8e-16 89.4 53 77.4
RhsimUnG0084100 Rhododendron simsii HOM05D006410 ORTHO05D007914 5.0e-16 89.0 53 75.5
RhsimUnG0080900 Rhododendron simsii HOM05D006410 ORTHO05D007914 1.5e-15 87.4 52 75.0
Sed0027859 Sechium edule HOM05D006410 ORTHO05D007914 7.2e-15 85.1 52 78.8
MCO09G517 Micromonas commoda HOM05D006410 ORTHO05D007914 1.2e-09 67.8 103 35.0


User provided reference genes

Program Settings