Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.CKB8X1 Arachis hypogaea HOM05D008031 ORTHO05D010063 1.5e-92 342.8 170 100.0
arahy.Tifrunner.gnm1.ann1.PVL51W Arachis hypogaea HOM05D008031 ORTHO05D010063 2.9e-88 328.6 170 97.1
arahy.Tifrunner.gnm1.ann1.8JA41T Arachis hypogaea HOM05D008031 ORTHO05D010063 6.5e-88 327.4 170 95.9
Lj3g0013752 Lotus japonicus HOM05D008031 ORTHO05D010063 6.4e-35 151.4 174 55.7
Lalb_Chr10g0101091 Lupinus albus HOM05D008031 ORTHO05D010063 2.1e-33 146.4 176 54.5
Phvul.010G122700 Phaseolus vulgaris HOM05D008031 ORTHO05D010063 3.9e-32 142.1 176 52.8
Glyma.07G046300 Glycine max HOM05D008031 ORTHO05D010063 2.5e-31 139.4 175 52.6
VMungo0331G1222 Vigna mungo HOM05D008031 ORTHO05D010063 6.2e-30 134.8 176 51.1
Medtr8g023390 Medicago truncatula HOM05D008031 ORTHO05D010063 5.8e-28 128.3 177 50.8
TPR.G29474 Trifolium pratense HOM05D008031 ORTHO05D010063 6.0e-25 118.2 178 48.3
Glyma.16G014500 Glycine max HOM05D008031 ORTHO05D010063 1.3e-24 117.1 172 47.7
Manes.04G151400 Manihot esculenta HOM05D008031 ORTHO05D010063 4.0e-21 105.5 170 44.7
Potri.001G162100 Populus trichocarpa HOM05D008031 ORTHO05D010063 8.9e-21 104.4 173 43.4
GSVIVG01016662001 Vitis vinifera HOM05D008031 ORTHO05D010063 2.2e-19 99.8 162 43.8
Haze_16140 Corylus avellana HOM05D001728 ORTHO05D004321 6.4e-19 98.2 171 42.7
Atru.chr1.4165 Acer truncatum HOM05D008031 ORTHO05D010063 2.4e-18 96.3 174 43.7
Atru.chr1.4161 Acer truncatum HOM05D008031 ORTHO05D010063 1.2e-17 94.0 166 47.6
Cpa.g.sc25.199 Carica papaya HOM05D008031 ORTHO05D010063 1.0e-16 90.9 177 39.5
CsaV3_3G031060 Cucumis sativus L. HOM05D008031 ORTHO05D010063 3.0e-16 89.4 162 42.6
Sed0024761 Sechium edule HOM05D008031 ORTHO05D010063 3.9e-16 89.0 167 43.7
Oeu019510.1 Olea europaea HOM05D008031 ORTHO05D010063 5.1e-16 88.6 172 41.3
CiPaw.01G211000 Carya illinoinensis HOM05D008031 ORTHO05D010063 1.1e-15 87.4 175 42.3
Ciclev10027015m.g Citrus clementina HOM05D008031 ORTHO05D010063 1.5e-15 87.0 150 43.3
TWI14G1127 Tripterygium wilfordii HOM05D008031 ORTHO05D010063 1.5e-15 87.0 164 42.7
Potri.003G073200 Populus trichocarpa HOM05D008031 ORTHO05D010063 1.9e-15 86.7 172 40.7
Actinidia21841 Actinidia chinensis HOM05D008031 ORTHO05D010063 5.6e-15 85.1 174 39.1
Cfa003457 Carpinus fangiana HOM05D008031 ORTHO05D010063 5.6e-15 85.1 174 41.4
MELO3C022708.2 Cucumis melo HOM05D008031 ORTHO05D010063 5.6e-15 85.1 172 40.1
CiPaw.02G130600 Carya illinoinensis HOM05D008031 ORTHO05D010063 7.3e-15 84.7 177 42.4
ClCG07G014260 Citrullus lanatus HOM05D008031 ORTHO05D010063 2.1e-14 83.2 167 41.3
COL.COLO4_30875 Corchorus olitorius HOM05D008031 ORTHO05D010063 2.1e-14 83.2 173 38.7
Thecc.06G130800 Theobroma cacao HOM05D008031 ORTHO05D010063 2.8e-14 82.8 173 39.3
PGR102G3014 Punica granatum HOM05D008031 ORTHO05D010063 3.6e-14 82.4 175 37.7
QL05p000882 Quercus lobata HOM05D008031 ORTHO05D010063 4.8e-14 82.0 171 40.4
QL05p001111 Quercus lobata HOM05D008031 ORTHO05D010063 4.8e-14 82.0 171 40.4
Gohir.D10G051032 Gossypium hirsutum HOM05D001728 ORTHO05D004321 1.8e-13 80.1 175 41.1
Hma1.2p1_0090F.1_g045750 Hydrangea macrophylla HOM05D008031 ORTHO05D010063 3.1e-13 79.3 160 40.6
Hma1.2p1_2628F.1_g325675 Hydrangea macrophylla HOM05D008031 ORTHO05D010063 3.1e-13 79.3 160 40.6
Gorai.011G054900 Gossypium raimondii HOM05D001728 ORTHO05D004321 5.3e-13 78.6 175 40.6
FAN05G2192 Fragaria x ananassa HOM05D008031 ORTHO05D010063 6.9e-13 78.2 148 41.2
Gohir.A10G048037 Gossypium hirsutum HOM05D001728 ORTHO05D004321 6.9e-13 78.2 175 40.6
Oeu053417.1 Olea europaea HOM05D008031 ORTHO05D010063 6.9e-13 78.2 172 37.8
TAR626G1534 Trochodendron aralioides HOM05D008031 ORTHO05D010063 9.0e-13 77.8 171 37.4
FAN02G3240 Fragaria x ananassa HOM05D008031 ORTHO05D010063 1.2e-12 77.4 171 38.6
Actinidia24421 Actinidia chinensis HOM05D001728 ORTHO05D004321 2.0e-12 76.6 174 39.1
Prupe.3G030600 Prunus persica HOM05D008031 ORTHO05D010063 1.3e-11 73.9 172 36.0
Migut.I01137 Erythranthe guttata HOM05D008031 ORTHO05D010063 1.7e-11 73.6 174 39.7
MBI19_g32875_MAGBIO Magnolia biondii HOM05D008031 ORTHO05D010063 2.2e-11 73.2 179 38.5
Rhsim08G0245200 Rhododendron simsii HOM05D008031 ORTHO05D010063 2.2e-11 73.2 167 38.9
RcHm_v2.0_Chr2g0148091 Rosa chinensis HOM05D008031 ORTHO05D010063 2.2e-11 73.2 171 37.4
FvH4_6g35970 Fragaria vesca HOM05D008031 ORTHO05D010063 4.9e-11 72.0 171 38.0
FAN09G4453 Fragaria x ananassa HOM05D008031 ORTHO05D010063 4.9e-11 72.0 171 38.0
FAN14G4753 Fragaria x ananassa HOM05D008031 ORTHO05D010063 4.9e-11 72.0 171 38.0
SGA_v2.0_scaffold71G23934 Striga asiatica HOM05D008031 ORTHO05D010063 1.1e-10 70.9 159 38.4
Duzib235G0155 Durio zibethinus HOM05D008031 ORTHO05D010063 4.2e-10 68.9 144 39.6
Peaxi162Scf00038g02327 Petunia axillaris HOM05D008031 ORTHO05D010063 4.2e-10 68.9 177 36.2
Ah.08g217400 Amaranthus hybridus HOM05D008031 ORTHO05D010063 7.1e-10 68.2 171 37.4
Eucgr.J02592 Eucalyptus grandis HOM05D008031 ORTHO05D010063 7.1e-10 68.2 174 37.4
Solyc03g123670.3 Solanum lycopersicum HOM05D008031 ORTHO05D010063 7.1e-10 68.2 177 37.9
CSS0025062 Camellia sinensis var. sinensis HOM05D001728 ORTHO05D004321 1.2e-09 67.4 175 33.1
MD09G1172200 Malus domestica HOM05D008031 ORTHO05D010063 2.1e-09 66.6 158 36.1
Oeu006417.1 Olea europaea HOM05D005099 ORTHO05D006087 2.1e-09 66.6 170 34.1
Sopen03g041440 Solanum pennellii HOM05D008031 ORTHO05D010063 2.7e-09 66.2 177 36.7
Eucgr.I02164 Eucalyptus grandis HOM05D008031 ORTHO05D010063 6.0e-09 65.1 166 32.5
Aqoxy7G04192 Aquilegia oxysepala HOM05D008031 ORTHO05D010063 1.3e-08 63.9 151 36.4
PGSC0003DMG400009151 Solanum tuberosum HOM05D008031 ORTHO05D010063 1.8e-08 63.5 177 35.6
MD17G1154700 Malus domestica HOM05D008031 ORTHO05D010063 3.0e-08 62.8 158 36.1
Dinv20378 Davidia involucrata HOM05D001728 ORTHO05D004321 2.5e-07 59.7 111 44.1
Rhsim02G0007200 Rhododendron simsii HOM05D005099 ORTHO05D006087 5.6e-07 58.5 171 31.6
Duzib212G0134 Durio zibethinus HOM05D005099 ORTHO05D006087 9.6e-07 57.8 186 33.3
Manes.15G010800 Manihot esculenta HOM05D005099 ORTHO05D006087 1.6e-06 57.0 174 31.6
Oeu015468.1 Olea europaea HOM05D008031 ORTHO05D010063 1.6e-06 57.0 155 34.8
CsaV3_6G023860 Cucumis sativus L. HOM05D005099 ORTHO05D006087 3.7e-06 55.8 184 31.0
Duzib151G0929 Durio zibethinus HOM05D005099 ORTHO05D006087 3.7e-06 55.8 185 32.4
Nitab4.5_0006966g0010 Nicotiana tabacum HOM05D008031 ORTHO05D010063 4.8e-06 55.5 178 33.1
Hma1.2p1_0804F.1_g221070 Hydrangea macrophylla HOM05D005099 ORTHO05D006087 8.1e-06 54.7 179 32.4
Sabra08G0151700 Salix brachista HOM05D005099 ORTHO05D006087 8.1e-06 54.7 178 30.9


User provided reference genes

Program Settings