Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.CHS32V Arachis hypogaea HOM05D000015 ORTHO05D085546 4.0e-30 134.0 64 100.0
arahy.Tifrunner.gnm1.ann1.B0SKQG Arachis hypogaea HOM05D000980 ORTHO05D000649 7.8e-10 66.6 34 91.2
arahy.Tifrunner.gnm1.ann1.HV5BK9 Arachis hypogaea HOM05D000015 ORTHO05D003512 7.8e-10 66.6 34 91.2
TPR.G33756 Trifolium pratense HOM05D000015 ORTHO05D003512 2.5e-08 61.6 34 79.4
Ca_25040_v3 Cicer arietinum L. HOM05D000015 ORTHO05D003512 5.6e-08 60.5 34 79.4
Glyma.01G155900 Glycine max HOM05D000015 ORTHO05D003512 5.6e-08 60.5 34 79.4
Glyma.11G088900 Glycine max HOM05D000015 ORTHO05D003512 5.6e-08 60.5 34 79.4
Lalb_Chr16g0380251 Lupinus albus HOM05D000015 ORTHO05D003512 9.5e-08 59.7 35 74.3
Medtr5g025010 Medicago truncatula HOM05D000015 ORTHO05D003512 9.5e-08 59.7 34 76.5
Psat2g147120 Pisum sativum HOM05D000015 ORTHO05D003512 1.6e-07 58.9 34 76.5
Lj2g0014625 Lotus japonicus HOM05D000015 ORTHO05D003512 3.6e-07 57.8 34 73.5
TPR.G14277 Trifolium pratense HOM05D000015 ORTHO05D003512 3.6e-07 57.8 35 77.1
Thecc.01G000900 Theobroma cacao HOM05D000015 ORTHO05D003512 4.7e-07 57.4 35 80.0
Medtr8g072440 Medicago truncatula HOM05D000015 ORTHO05D003512 6.2e-07 57.0 34 76.5
Ca_22441_v3 Cicer arietinum L. HOM05D000015 ORTHO05D003512 8.1e-07 56.6 34 79.4
Ca_22448_v3 Cicer arietinum L. HOM05D000015 ORTHO05D003512 8.1e-07 56.6 34 79.4
arahy.Tifrunner.gnm1.ann1.KJ02D9 Arachis hypogaea HOM05D000015 ORTHO05D003512 1.1e-06 56.2 37 70.3
arahy.Tifrunner.gnm1.ann1.RG5V6R Arachis hypogaea HOM05D000015 ORTHO05D003512 1.1e-06 56.2 37 70.3
Cfa007120 Carpinus fangiana HOM05D000015 ORTHO05D003512 1.1e-06 56.2 34 70.6
Haze_03649 Corylus avellana HOM05D000015 ORTHO05D003512 1.1e-06 56.2 34 70.6
RcHm_v2.0_Chr2g0096651 Rosa chinensis HOM05D000015 ORTHO05D003512 1.1e-06 56.2 34 70.6
Glyma.09G195100 Glycine max HOM05D000015 ORTHO05D003512 1.4e-06 55.8 34 73.5
Phvul.003G279300 Phaseolus vulgaris HOM05D000015 ORTHO05D003512 1.4e-06 55.8 34 73.5
VMungo1215G1965 Vigna mungo HOM05D000015 ORTHO05D003512 1.8e-06 55.5 34 73.5
Lalb_Chr05g0215001 Lupinus albus HOM05D000015 ORTHO05D003512 2.3e-06 55.1 34 70.6
MD15G1226700 Malus domestica HOM05D000015 ORTHO05D003512 2.3e-06 55.1 34 70.6
Manes.01G158500 Manihot esculenta HOM05D000015 ORTHO05D003512 2.3e-06 55.1 34 73.5
Nn6g31588 Nelumbo nucifera HOM05D000015 ORTHO05D003512 2.3e-06 55.1 34 73.5
Ciclev10024941m.g Citrus clementina HOM05D000015 ORTHO05D003512 4.0e-06 54.3 34 70.6
Lsat_1_v5_gn_2_72921 Lactuca sativa HOM05D000015 ORTHO05D003512 4.0e-06 54.3 34 70.6
Phvul.002G119700 Phaseolus vulgaris HOM05D000015 ORTHO05D003512 4.0e-06 54.3 34 67.6
Potri.011G146300 Populus trichocarpa HOM05D000015 ORTHO05D003512 4.0e-06 54.3 34 70.6
Sabra11G0131200 Salix brachista HOM05D000015 ORTHO05D003512 4.0e-06 54.3 34 70.6
VMungo0251G1346 Vigna mungo HOM05D000015 ORTHO05D003512 4.0e-06 54.3 34 70.6
CiPaw.03G212100 Carya illinoinensis HOM05D000015 ORTHO05D003512 5.2e-06 53.9 34 70.6
HanXRQChr14g0443741 Helianthus annuus HOM05D000015 ORTHO05D003512 5.2e-06 53.9 34 67.6
Potri.001G455800 Populus trichocarpa HOM05D000015 ORTHO05D003512 5.2e-06 53.9 34 67.6
ECA238G2143 Erigeron canadensis HOM05D000015 ORTHO05D003512 6.8e-06 53.5 33 72.7
FAN19G2626 Fragaria x ananassa HOM05D000015 ORTHO05D003512 6.8e-06 53.5 34 70.6
FAN23G0183 Fragaria x ananassa HOM05D000015 ORTHO05D003512 6.8e-06 53.5 34 70.6
FAN23G0680 Fragaria x ananassa HOM05D000015 ORTHO05D003512 6.8e-06 53.5 34 70.6
FAN26G2046 Fragaria x ananassa HOM05D000015 ORTHO05D003512 6.8e-06 53.5 34 70.6
FAN28G0786 Fragaria x ananassa HOM05D000015 ORTHO05D003512 6.8e-06 53.5 34 70.6
Glyma.16G116000 Glycine max HOM05D000015 ORTHO05D003512 6.8e-06 53.5 34 67.6
Psat0s3372g0040 Pisum sativum HOM05D000015 ORTHO05D003512 6.8e-06 53.5 35 71.4
Sabra16G0308400 Salix brachista HOM05D000015 ORTHO05D003512 6.8e-06 53.5 34 67.6
HanXRQChr15g0486421 Helianthus annuus HOM05D000015 ORTHO05D003512 8.9e-06 53.1 34 70.6
Lalb_Chr09g0334471 Lupinus albus HOM05D000015 ORTHO05D003512 8.9e-06 53.1 33 75.8
PGR102G0565 Punica granatum HOM05D000015 ORTHO05D003512 8.9e-06 53.1 34 67.6


User provided reference genes

Program Settings