Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.CH9KSW Arachis hypogaea HOM05D006816 ORTHO05D008666 2.5e-246 855.1 465 100.0
arahy.Tifrunner.gnm1.ann1.2HFS1Z Arachis hypogaea HOM05D006816 ORTHO05D008666 2.3e-244 848.6 465 97.4
Lalb_Chr07g0185401 Lupinus albus HOM05D006816 ORTHO05D008666 6.2e-165 584.7 404 77.7
Phvul.002G259600 Phaseolus vulgaris HOM05D006816 ORTHO05D008666 1.2e-160 570.5 437 71.9
Glyma.05G174600 Glycine max HOM05D006816 ORTHO05D008666 3.0e-159 565.8 436 71.8
VMungo0251G0196 Vigna mungo HOM05D006816 ORTHO05D008666 1.8e-156 556.6 435 71.7
Ca_17778_v3 Cicer arietinum L. HOM05D006816 ORTHO05D008666 1.4e-153 547.0 378 76.5
TPR.G6183 Trifolium pratense HOM05D006816 ORTHO05D008666 7.1e-153 544.7 422 69.4
Medtr8g089810 Medicago truncatula HOM05D006816 ORTHO05D008666 3.0e-151 539.3 377 74.3
Lj4g0008868 Lotus japonicus HOM05D006816 ORTHO05D008666 1.3e-149 533.9 417 70.3
Psat7g059360 Pisum sativum HOM05D006816 ORTHO05D008666 1.6e-141 506.9 417 69.3
TAR622G0126 Trochodendron aralioides HOM05D006816 ORTHO05D008666 1.0e-122 444.5 433 58.9
Ciclev10030964m.g Citrus clementina HOM05D006816 ORTHO05D008666 7.4e-118 428.3 447 57.5
QL03p057598 Quercus lobata HOM05D006816 ORTHO05D008666 1.6e-117 427.2 431 57.8
Nn4g22582 Nelumbo nucifera HOM05D006816 ORTHO05D008666 9.0e-116 421.4 375 61.6
Dinv15216 Davidia involucrata HOM05D006816 ORTHO05D008666 5.9e-115 418.7 429 59.4
GSVIVG01000542001 Vitis vinifera HOM05D006816 ORTHO05D008666 1.0e-114 417.9 471 55.4
Thecc.02G261900 Theobroma cacao HOM05D006816 ORTHO05D008666 3.2e-113 412.9 440 57.5
Actinidia01356 Actinidia chinensis HOM05D006816 ORTHO05D008666 9.4e-113 411.4 423 57.9
CSS0008455 Camellia sinensis var. sinensis HOM05D006816 ORTHO05D008666 6.1e-112 408.7 377 59.7
CANSAT01G2021 Cannabis sativa HOM05D006816 ORTHO05D008666 2.3e-111 406.8 404 58.2
FvH4_4g25720 Fragaria vesca HOM05D006816 ORTHO05D008666 1.1e-110 404.4 418 58.1
PGR119G0117 Punica granatum HOM05D006816 ORTHO05D008666 2.0e-110 403.7 378 62.7
Gohir.D02G158100 Gossypium hirsutum HOM05D006816 ORTHO05D008666 2.2e-109 400.2 385 62.1
Gorai.005G177300 Gossypium raimondii HOM05D006816 ORTHO05D008666 2.2e-109 400.2 385 62.1
COL.COLO4_23463 Corchorus olitorius HOM05D006816 ORTHO05D008666 2.8e-109 399.8 409 57.9
CiPaw.05G180700 Carya illinoinensis HOM05D006816 ORTHO05D008666 3.7e-109 399.4 364 63.2
DCAR_031163 Daucus carota HOM05D006816 ORTHO05D008666 4.8e-109 399.1 371 59.8
Lj3C1059T10 Lonicera japonica HOM05D006816 ORTHO05D008666 4.8e-109 399.1 414 58.2
Atru.chr11.2152 Acer truncatum HOM05D006816 ORTHO05D008666 2.4e-108 396.7 380 60.3
MD13G1099700 Malus domestica HOM05D006816 ORTHO05D008666 2.4e-108 396.7 435 55.2
TWI36G0164 Tripterygium wilfordii HOM05D006816 ORTHO05D008666 2.4e-108 396.7 422 55.9
Gohir.A03G133700 Gossypium hirsutum HOM05D006816 ORTHO05D008666 2.6e-107 393.3 388 60.8
FAN17G1412 Fragaria x ananassa HOM05D006816 ORTHO05D008666 3.4e-107 392.9 382 60.7
Cpa.g.sc33.36 Carica papaya HOM05D006816 ORTHO05D008666 1.0e-106 391.3 371 59.8
AUR62024254 Chenopodium quinoa HOM05D006816 ORTHO05D008666 2.2e-106 390.2 376 58.0
PSO063G6228 Papaver somniferum HOM05D006816 ORTHO05D008666 2.2e-106 390.2 411 54.3
Haze_12261 Corylus avellana HOM05D006816 ORTHO05D008666 3.8e-106 389.4 488 50.8
Eucgr.H02486 Eucalyptus grandis HOM05D006816 ORTHO05D008666 5.0e-106 389.0 399 57.1
PSO754G0080 Papaver somniferum HOM05D006816 ORTHO05D008666 1.9e-105 387.1 411 53.8
EL10Ac6g13857 Beta vulgaris HOM05D006816 ORTHO05D008666 3.2e-105 386.3 429 55.2
FAN12G1622 Fragaria x ananassa HOM05D006816 ORTHO05D008666 5.5e-105 385.6 382 59.9
Sabra10G0021100 Salix brachista HOM05D006816 ORTHO05D008666 9.4e-105 384.8 419 56.3
FAN22G0176 Fragaria x ananassa HOM05D006816 ORTHO05D008666 1.6e-104 384.0 424 55.7
Potri.010G047500 Populus trichocarpa HOM05D006816 ORTHO05D008666 1.6e-104 384.0 373 59.8
Nitab4.5_0000524g0100 Nicotiana tabacum HOM05D006816 ORTHO05D008666 2.1e-104 383.6 377 62.1
RcHm_v2.0_Chr4g0433151 Rosa chinensis HOM05D006816 ORTHO05D008666 2.1e-104 383.6 413 55.7
Ah.02g130220 Amaranthus hybridus HOM05D006816 ORTHO05D008666 3.6e-104 382.9 445 52.1
HanXRQChr17g0569531 Helianthus annuus HOM05D006816 ORTHO05D008666 6.7e-103 378.6 373 59.0
Hund06034 Selenicereus undatus HOM05D006816 ORTHO05D008666 1.5e-102 377.5 418 52.9
Lsat_1_v5_gn_4_4020 Lactuca sativa HOM05D006816 ORTHO05D008666 2.0e-102 377.1 430 51.9
CsaV3_5G031010 Cucumis sativus L. HOM05D006816 ORTHO05D008666 3.3e-102 376.3 442 52.9
Nitab4.5_0006963g0030 Nicotiana tabacum HOM05D006816 ORTHO05D008666 4.4e-102 375.9 408 57.8
CARHR060480 Cardamine hirsuta HOM05D006816 ORTHO05D008666 3.7e-101 372.9 406 55.9
Manes.13G022900 Manihot esculenta HOM05D006816 ORTHO05D008666 8.2e-101 371.7 383 58.0
ECA234G3219 Erigeron canadensis HOM05D006816 ORTHO05D008666 1.1e-100 371.3 363 58.7
AT1G67840 Arabidopsis thaliana HOM05D006816 ORTHO05D008666 1.4e-100 370.9 440 52.3
BcaC08g46032 Brassica carinata HOM05D006816 ORTHO05D008666 1.4e-100 370.9 381 58.5
Aqoxy5G03738 Aquilegia oxysepala HOM05D006816 ORTHO05D008666 1.8e-100 370.5 360 56.7
C06p38240 Brassica napus HOM05D006816 ORTHO05D008666 2.4e-100 370.2 379 58.8
PGSC0003DMG400018598 Solanum tuberosum HOM05D006816 ORTHO05D008666 3.1e-100 369.8 408 58.1
Carub.0002s1430 Capsella rubella HOM05D006816 ORTHO05D008666 4.1e-100 369.4 379 58.3
Prupe.1G246300 Prunus persica HOM05D006816 ORTHO05D008666 7.0e-100 368.6 438 51.1
BolC6t38923H Brassica oleracea HOM05D006816 ORTHO05D008666 1.2e-99 367.9 381 58.3
Sopen05g008580 Solanum pennellii HOM05D006816 ORTHO05D008666 2.0e-99 367.1 408 54.9
AL2G26590 Arabidopsis lyrata HOM05D006816 ORTHO05D008666 3.5e-99 366.3 377 58.1
FAN07G2231 Fragaria x ananassa HOM05D006816 ORTHO05D008666 4.5e-99 365.9 432 54.2
Thhalv10018280m.g Eutrema salsugineum HOM05D006816 ORTHO05D008666 7.7e-99 365.2 381 58.0
MELO3C011940.2 Cucumis melo HOM05D006816 ORTHO05D008666 1.0e-98 364.8 455 51.6
Aa31sc755G30 Aethionema arabicum HOM05D006816 ORTHO05D008666 1.7e-98 364.0 380 59.5
Sed0004203 Sechium edule HOM05D006816 ORTHO05D008666 2.2e-98 363.6 397 54.4
BraA07t30858Z Brassica rapa HOM05D006816 ORTHO05D008666 5.0e-98 362.5 382 58.4
Solyc05g013670.3 Solanum lycopersicum HOM05D006816 ORTHO05D008666 5.0e-98 362.5 408 54.4
Sp5g22850 Schrenkiella parvula HOM05D006816 ORTHO05D008666 6.5e-98 362.1 381 57.7
Oeu057544.1 Olea europaea HOM05D006816 ORTHO05D008666 8.5e-98 361.7 448 51.8
Duzib251G0886 Durio zibethinus HOM05D006816 ORTHO05D008666 1.5e-97 360.9 385 59.0
ClCG05G025840 Citrullus lanatus HOM05D006816 ORTHO05D008666 1.9e-97 360.5 422 52.4
BcaB03g15378 Brassica carinata HOM05D006816 ORTHO05D008666 2.5e-97 360.1 382 58.4
A07p32350 Brassica napus HOM05D006816 ORTHO05D008666 3.2e-97 359.8 380 58.2
Migut.K00611 Erythranthe guttata HOM05D006816 ORTHO05D008666 5.5e-97 359.0 372 57.3
THA.LOC104825556 Tarenaya hassleriana HOM05D006816 ORTHO05D008666 3.6e-96 356.3 366 56.0
vmacro01121 Vaccinium macrocarpon HOM05D006816 ORTHO05D008666 4.4e-94 349.4 442 50.5
SalBow2G0630 Salvia bowleyana HOM05D006816 ORTHO05D008666 1.7e-93 347.4 389 53.5
Peaxi162Scf00128g00318 Petunia axillaris HOM05D006816 ORTHO05D008666 4.5e-91 339.3 375 55.7
Cc11_g15850 Coffea canephora HOM05D006816 ORTHO05D008666 5.0e-90 335.9 376 55.3
ATR0824G245 Amborella trichopoda HOM05D006816 ORTHO05D008666 5.2e-87 325.9 431 47.6
unitig_699.g19932 Utricularia gibba HOM05D006816 ORTHO05D008666 1.8e-84 317.4 381 50.9
Os12g0292900 Oryza sativa ssp. japonica HOM05D006816 ORTHO05D008666 1.2e-83 314.7 379 49.9
AUR62005487 Chenopodium quinoa HOM05D006816 ORTHO05D008666 5.9e-83 312.4 453 45.5
Zm00001eb319330 Zea mays HOM05D006816 ORTHO05D008666 1.2e-80 304.7 383 51.4
Sc11g0000930 Simmondsia chinensis HOM05D006816 ORTHO05D008666 8.6e-74 282.0 301 54.5
CAN.G436.5 Capsicum annuum HOM05D006816 ORTHO05D008666 7.5e-70 268.9 304 54.3
SGA_v2.0_scaffold100G29566 Striga asiatica HOM05D006816 ORTHO05D008666 4.1e-68 263.1 340 47.1
CDE02G3152 Ceratophyllum demersum HOM05D006816 ORTHO05D008666 1.2e-64 251.5 373 43.7
SEGI_18687 Sequoiadendron giganteum HOM05D006816 ORTHO05D008666 1.5e-62 244.6 375 40.0
MBI17_g43191_MAGBIO Magnolia biondii HOM05D006816 ORTHO05D008666 2.2e-61 240.7 284 52.1
Psat3g153160 Pisum sativum HOM05D006816 ORTHO05D008517 2.7e-51 207.2 237 53.6
Psat3g153200 Pisum sativum HOM05D006816 ORTHO05D008666 1.1e-47 195.3 135 77.8
Mapoly0088s0066 Marchantia polymorpha HOM05D006816 ORTHO05D008666 8.4e-45 185.7 392 34.7
Psat2g121560 Pisum sativum HOM05D006816 ORTHO05D008666 2.4e-39 167.5 116 78.4
Psat4g077560 Pisum sativum HOM05D006816 ORTHO05D008666 4.2e-36 156.8 98 84.7
Pp3c11_24610 Physcomitrium patens HOM05D006816 ORTHO05D008666 2.1e-32 144.4 373 33.5
HPP92_023364 Vanilla planifolia HOM05D006816 ORTHO05D008666 4.8e-32 143.3 150 54.0
CBR_g52389 Chara braunii HOM05D006816 ORTHO05D008666 6.9e-31 139.4 333 31.8
HPP92_023363 Vanilla planifolia HOM05D006816 ORTHO05D008666 1.9e-28 131.3 131 53.4
COL.COLO4_35805 Corchorus olitorius HOM05D006816 ORTHO05D008666 3.3e-25 120.6 101 63.4
Glyma.08G131775 Glycine max HOM05D006816 ORTHO05D008666 2.6e-22 110.9 85 65.9
Actinidia08129 Actinidia chinensis HOM05D006816 ORTHO05D008666 1.8e-18 98.2 80 65.0
FvH4_4g35670 Fragaria vesca HOM05D006816 ORTHO05D008666 2.5e-12 77.8 89 48.3
FAN22G1065 Fragaria x ananassa HOM05D000247 ORTHO05D000288 2.7e-11 74.3 111 42.3


User provided reference genes

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