Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.CH2TLP Arachis hypogaea HOM05D005988 ORTHO05D007392 4.9e-63 244.2 116 100.0
arahy.Tifrunner.gnm1.ann1.5IUK3V Arachis hypogaea HOM05D005988 ORTHO05D007392 2.6e-48 195.3 138 76.1
arahy.Tifrunner.gnm1.ann1.XY4E2W Arachis hypogaea HOM05D005988 ORTHO05D007392 4.5e-48 194.5 138 74.6
arahy.Tifrunner.gnm1.ann1.NCU5C9 Arachis hypogaea HOM05D005988 ORTHO05D007392 7.2e-46 187.2 89 97.8
Phvul.L002046 Phaseolus vulgaris HOM05D005988 ORTHO05D007392 4.5e-40 167.9 87 87.4
Glyma.05G147302 Glycine max HOM05D005988 ORTHO05D007392 1.7e-39 166.0 87 86.2
Glyma.08G104300 Glycine max HOM05D005988 ORTHO05D007392 1.7e-39 166.0 87 86.2
Ca_18034_v3 Cicer arietinum L. HOM05D005988 ORTHO05D007392 2.9e-39 165.2 86 84.9
Psat0s2314g0040 Pisum sativum HOM05D005988 ORTHO05D007392 8.5e-39 163.7 86 84.9
TPR.G34164 Trifolium pratense HOM05D005988 ORTHO05D007392 8.5e-39 163.7 86 84.9
CANSAT01G3258 Cannabis sativa HOM05D005988 ORTHO05D007392 1.1e-38 163.3 85 85.9
Manes.13G012300 Manihot esculenta HOM05D005988 ORTHO05D007392 2.5e-38 162.2 84 85.7
Lj4g0004056 Lotus japonicus HOM05D005988 ORTHO05D007392 4.2e-38 161.4 86 82.6
PSO017G5437 Papaver somniferum HOM05D005988 ORTHO05D007392 4.2e-38 161.4 84 84.5
Prupe.1G225900 Prunus persica HOM05D005988 ORTHO05D007392 4.2e-38 161.4 99 74.7
RcHm_v2.0_Chr4g0430261 Rosa chinensis HOM05D005988 ORTHO05D007392 5.5e-38 161.0 84 83.3
TPR.G17077 Trifolium pratense HOM05D005988 ORTHO05D007392 5.5e-38 161.0 86 83.7
Hma1.2p1_0065F.1_g035500 Hydrangea macrophylla HOM05D005988 ORTHO05D007392 1.2e-37 159.8 94 78.7
Cfa009369 Carpinus fangiana HOM05D005988 ORTHO05D007392 1.6e-37 159.5 84 84.5
CiPaw.05G109900 Carya illinoinensis HOM05D005988 ORTHO05D007392 1.6e-37 159.5 84 84.5
Haze_12418 Corylus avellana HOM05D005988 ORTHO05D007392 1.6e-37 159.5 84 84.5
Sed0026530 Sechium edule HOM05D005988 ORTHO05D007392 2.1e-37 159.1 84 85.7
Aqoxy3G00796 Aquilegia oxysepala HOM05D005988 ORTHO05D007392 2.7e-37 158.7 84 82.1
Potri.001G055400 Populus trichocarpa HOM05D005988 ORTHO05D007392 2.7e-37 158.7 84 84.5
Lalb_Chr07g0187141 Lupinus albus HOM05D005988 ORTHO05D007392 3.6e-37 158.3 86 80.2
Manes.12G011400 Manihot esculenta HOM05D005988 ORTHO05D007392 3.6e-37 158.3 85 81.2
Sabra01G0040000 Salix brachista HOM05D005988 ORTHO05D007392 3.6e-37 158.3 95 76.8
Nn4g22324 Nelumbo nucifera HOM05D005988 ORTHO05D007392 4.7e-37 157.9 85 82.4
PGR102G1123 Punica granatum HOM05D005988 ORTHO05D007392 4.7e-37 157.9 84 83.3
MELO3C011867.2 Cucumis melo HOM05D005988 ORTHO05D007392 6.1e-37 157.5 87 80.5
Eucgr.B03491 Eucalyptus grandis HOM05D005988 ORTHO05D007392 6.1e-37 157.5 85 82.4
FvH4_4g23770 Fragaria vesca HOM05D005988 ORTHO05D007392 6.1e-37 157.5 83 81.9
FAN07G1208 Fragaria x ananassa HOM05D005988 ORTHO05D007392 6.1e-37 157.5 83 81.9
FAN12G0190 Fragaria x ananassa HOM05D005988 ORTHO05D007392 6.1e-37 157.5 83 81.9
FAN17G2984 Fragaria x ananassa HOM05D005988 ORTHO05D007392 6.1e-37 157.5 83 81.9
Gohir.D02G149200 Gossypium hirsutum HOM05D005988 ORTHO05D007392 6.1e-37 157.5 84 82.1
Gorai.005G167100 Gossypium raimondii HOM05D005988 ORTHO05D007392 6.1e-37 157.5 84 82.1
Medtr8g080630 Medicago truncatula HOM05D005988 ORTHO05D007392 6.1e-37 157.5 86 81.4
ClCG11G013680 Citrullus lanatus HOM05D005988 ORTHO05D007392 7.9e-37 157.1 92 78.3
Gohir.A03G126200 Gossypium hirsutum HOM05D005988 ORTHO05D007392 7.9e-37 157.1 84 82.1
MBI01_g01248_MAGBIO Magnolia biondii HOM05D005988 ORTHO05D007392 7.9e-37 157.1 84 82.1
Sabra03G0126500 Salix brachista HOM05D005988 ORTHO05D007392 7.9e-37 157.1 84 83.3
Lalb_Chr13g0294321 Lupinus albus HOM05D005988 ORTHO05D007392 1.0e-36 156.8 83 85.5
Potri.003G173000 Populus trichocarpa HOM05D005988 ORTHO05D007392 1.0e-36 156.8 84 82.1
Cc11_g16890 Coffea canephora HOM05D005988 ORTHO05D007392 1.8e-36 156.0 84 82.1
Thecc.02G210500 Theobroma cacao HOM05D005988 ORTHO05D007392 2.3e-36 155.6 84 81.0
EL10Ac2g02768 Beta vulgaris HOM05D005988 ORTHO05D007392 3.0e-36 155.2 87 77.0
CsaV3_5G030290 Cucumis sativus L. HOM05D005988 ORTHO05D007392 3.9e-36 154.8 87 77.0
vmacro01331 Vaccinium macrocarpon HOM05D005988 ORTHO05D007392 3.9e-36 154.8 84 79.8
vmacro05591 Vaccinium macrocarpon HOM05D005988 ORTHO05D007392 3.9e-36 154.8 84 79.8
vmacro23425 Vaccinium macrocarpon HOM05D005988 ORTHO05D007392 3.9e-36 154.8 84 79.8
Hund13388 Selenicereus undatus HOM05D005988 ORTHO05D007392 5.1e-36 154.5 87 77.0
Cpa.g.sc43.58 Carica papaya HOM05D005988 ORTHO05D007392 8.8e-36 153.7 85 78.8
DCAR_031202 Daucus carota HOM05D005988 ORTHO05D007392 8.8e-36 153.7 87 77.0
Rhsim04G0162300 Rhododendron simsii HOM05D005988 ORTHO05D007392 1.1e-35 153.3 84 78.6
CDE06G1110 Ceratophyllum demersum HOM05D005988 ORTHO05D007392 1.5e-35 152.9 83 80.7
AUR62022358 Chenopodium quinoa HOM05D005988 ORTHO05D007392 2.6e-35 152.1 92 69.6
COL.COLO4_20400 Corchorus olitorius HOM05D005988 ORTHO05D007392 2.6e-35 152.1 84 78.6
MD16G1119100 Malus domestica HOM05D005988 ORTHO05D007392 2.6e-35 152.1 80 82.5
ECA233G0411 Erigeron canadensis HOM05D005988 ORTHO05D007392 3.3e-35 151.8 85 76.5
GSVIVG01010482001 Vitis vinifera HOM05D005988 ORTHO05D007392 3.3e-35 151.8 85 78.8
AUR62034347 Chenopodium quinoa HOM05D005988 ORTHO05D007392 4.4e-35 151.4 84 75.0
Atru.chr11.2323 Acer truncatum HOM05D005988 ORTHO05D007392 7.4e-35 150.6 85 78.8
Nitab4.5_0005361g0020 Nicotiana tabacum HOM05D005988 ORTHO05D007392 9.7e-35 150.2 84 76.2
CSS0025775 Camellia sinensis var. sinensis HOM05D005988 ORTHO05D007392 1.3e-34 149.8 84 75.0
Nitab4.5_0006506g0010 Nicotiana tabacum HOM05D005988 ORTHO05D007392 1.3e-34 149.8 84 76.2
Rhsim12G0099600 Rhododendron simsii HOM05D005988 ORTHO05D007392 1.3e-34 149.8 84 77.4
FAN22G1192 Fragaria x ananassa HOM05D005988 ORTHO05D007392 1.7e-34 149.4 79 81.0
Ah.10g030080 Amaranthus hybridus HOM05D005988 ORTHO05D007392 2.8e-34 148.7 83 77.1
Sc15g0005560 Simmondsia chinensis HOM05D005988 ORTHO05D007392 3.7e-34 148.3 85 75.3
Sc15g0005760 Simmondsia chinensis HOM05D005988 ORTHO05D007392 3.7e-34 148.3 85 75.3
PGSC0003DMG400017679 Solanum tuberosum HOM05D005988 ORTHO05D007392 4.8e-34 147.9 84 77.4
QL03p052764 Quercus lobata HOM05D005988 ORTHO05D007392 8.2e-34 147.1 85 75.3
ATR0582G290 Amborella trichopoda HOM05D005988 ORTHO05D007392 1.4e-33 146.4 83 73.5
Solyc04g045620.3 Solanum lycopersicum HOM05D005988 ORTHO05D007392 1.4e-33 146.4 83 78.3
Sopen04g017580 Solanum pennellii HOM05D005988 ORTHO05D007392 1.4e-33 146.4 83 78.3
Duzib251G0424 Durio zibethinus HOM05D005988 ORTHO05D007392 1.8e-33 146.0 84 79.8
Aa31sc377G10 Aethionema arabicum HOM05D005988 ORTHO05D007392 2.4e-33 145.6 84 75.0
Duzib251G0426 Durio zibethinus HOM05D005988 ORTHO05D007392 2.4e-33 145.6 84 78.6
HanXRQChr12g0372221 Helianthus annuus HOM05D005988 ORTHO05D007392 2.4e-33 145.6 80 77.5
CARHR059890 Cardamine hirsuta HOM05D005988 ORTHO05D007392 3.1e-33 145.2 84 75.0
THA.LOC109117182 Tarenaya hassleriana HOM05D005988 ORTHO05D007392 3.1e-33 145.2 84 75.0
BcaB03g15204 Brassica carinata HOM05D005988 ORTHO05D007392 5.3e-33 144.4 84 75.0
BcaB05g24271 Brassica carinata HOM05D005988 ORTHO05D007392 5.3e-33 144.4 84 75.0
BcaB05g24277 Brassica carinata HOM05D005988 ORTHO05D007392 5.3e-33 144.4 84 75.0
BcaC08g46168 Brassica carinata HOM05D005988 ORTHO05D007392 5.3e-33 144.4 84 75.0
C06p42910 Brassica napus HOM05D005988 ORTHO05D007392 5.3e-33 144.4 84 75.0
Carub.0002s1364 Capsella rubella HOM05D005988 ORTHO05D007392 5.3e-33 144.4 84 75.0
Thhalv10019308m.g Eutrema salsugineum HOM05D005988 ORTHO05D007392 5.3e-33 144.4 87 72.4
Sp5g22300 Schrenkiella parvula HOM05D005988 ORTHO05D007392 5.3e-33 144.4 87 72.4
AL2G25900 Arabidopsis lyrata HOM05D005988 ORTHO05D007392 7.0e-33 144.1 84 73.8
AT1G67350 Arabidopsis thaliana HOM05D005988 ORTHO05D007392 7.0e-33 144.1 84 73.8
A07p33950 Brassica napus HOM05D005988 ORTHO05D007392 1.2e-32 143.3 84 73.8
BcaC03g14837 Brassica carinata HOM05D005988 ORTHO05D007392 1.5e-32 142.9 84 73.8
A02p14180 Brassica napus HOM05D005988 ORTHO05D007392 1.5e-32 142.9 84 73.8
C02p22980 Brassica napus HOM05D005988 ORTHO05D007392 1.5e-32 142.9 84 73.8
BraA02t06481Z Brassica rapa HOM05D005988 ORTHO05D007392 1.5e-32 142.9 84 73.8
CAN.G875.9 Capsicum annuum HOM05D005988 ORTHO05D007392 3.5e-32 141.7 87 72.4
Nitab4.5_0000060g0090 Nicotiana tabacum HOM05D005988 ORTHO05D007392 3.5e-32 141.7 86 73.3
Peaxi162Scf00038g00014 Petunia axillaris HOM05D005988 ORTHO05D007392 1.7e-31 139.4 87 71.3
MD13G1118900 Malus domestica HOM05D005988 ORTHO05D007392 2.9e-31 138.7 69 87.0
unitig_62.g23652 Utricularia gibba HOM05D005988 ORTHO05D007392 6.5e-31 137.5 87 69.0
Actinidia08072 Actinidia chinensis HOM05D005988 ORTHO05D007392 1.9e-30 136.0 87 69.0
Os03g0685900 Oryza sativa ssp. japonica HOM05D005988 ORTHO05D007392 7.2e-30 134.0 87 66.7
SalBow8G0976 Salvia bowleyana HOM05D005988 ORTHO05D007392 7.2e-30 134.0 87 66.7
Zm00001eb422590 Zea mays HOM05D005988 ORTHO05D007392 3.6e-29 131.7 87 64.4
DCAR_024095 Daucus carota HOM05D005988 ORTHO05D007392 4.7e-29 131.3 78 69.2
HPP92_012485 Vanilla planifolia HOM05D005988 ORTHO05D007392 1.0e-28 130.2 99 63.6
Zm00001eb290200 Zea mays HOM05D005988 ORTHO05D007392 1.4e-28 129.8 83 67.5
Migut.E00018 Erythranthe guttata HOM05D005988 ORTHO05D007392 5.2e-28 127.9 86 65.1
SGA_v2.0_scaffold144G35838 Striga asiatica HOM05D005988 ORTHO05D007392 5.2e-28 127.9 79 68.4
Lalb_Chr23g0278041 Lupinus albus HOM05D005988 ORTHO05D007392 3.3e-27 125.2 87 69.0
Lalb_Chr23g0278031 Lupinus albus HOM05D005988 ORTHO05D007392 5.7e-27 124.4 86 67.4
Lsat_1_v5_gn_7_95720 Lactuca sativa HOM05D005988 ORTHO05D007392 1.3e-26 123.2 71 70.4
TWI75G1041 Tripterygium wilfordii HOM05D005988 ORTHO05D007392 3.7e-26 121.7 85 63.5
TWI18G1296 Tripterygium wilfordii HOM05D005988 ORTHO05D007392 7.0e-25 117.5 85 60.0
CBR_g8533 Chara braunii HOM05D005988 ORTHO05D007392 1.0e-20 103.6 80 52.5
Migut.G00897 Erythranthe guttata HOM05D005988 ORTHO05D007392 2.3e-20 102.4 70 62.9
Migut.O00848 Erythranthe guttata HOM05D005988 ORTHO05D007392 2.3e-20 102.4 70 62.9
Pp3c3_5450 Physcomitrium patens HOM05D005988 ORTHO05D007392 1.5e-19 99.8 87 46.0
Nitab4.5_0001404g0080 Nicotiana tabacum HOM05D005988 ORTHO05D007392 9.1e-17 90.5 55 70.9
Mapoly0011s0010 Marchantia polymorpha HOM05D005988 ORTHO05D007392 5.9e-16 87.8 78 47.4
TAR629G1917 Trochodendron aralioides HOM05D000133 ORTHO05D002928 5.0e-15 84.7 42 83.3
AagrBONN_evm.TU.Sc2ySwM_117.535 Anthoceros agrestis HOM05D005988 ORTHO05D007392 1.1e-14 83.6 76 46.1
SMO356G0160 Selaginella moellendorffii HOM05D005988 ORTHO05D007392 2.5e-14 82.4 80 43.8
BcaB05g24274 Brassica carinata HOM05D005988 ORTHO05D007392 7.0e-09 64.3 95 40.0
arahy.Tifrunner.gnm1.ann1.BFR0IC Arachis hypogaea HOM05D005988 ORTHO05D007392 9.1e-09 63.9 56 55.4
Actinidia30649 Actinidia chinensis HOM05D005988 ORTHO05D007392 3.5e-08 62.0 41 68.3


User provided reference genes

Program Settings