Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.CGGZ98 Arachis hypogaea HOM05D007425 ORTHO05D009334 9.5e-108 393.7 219 100.0
Glyma.01G237800 Glycine max HOM05D007425 ORTHO05D009334 3.2e-31 139.4 171 56.1
Psat2g124560 Pisum sativum HOM05D007425 ORTHO05D009334 5.5e-31 138.7 127 70.1
LjContig00408g0025154 Lotus japonicus HOM05D007425 ORTHO05D009334 6.1e-30 135.2 110 66.4
Hma1.2p1_0275F.1_g110893 Hydrangea macrophylla HOM05D007425 ORTHO05D009334 1.3e-27 127.5 84 76.2
Hma1.2p1_0275F.1_g110900 Hydrangea macrophylla HOM05D007425 ORTHO05D009334 1.3e-27 127.5 84 76.2
VMungo1215G1239 Vigna mungo HOM05D007425 ORTHO05D009334 2.2e-27 126.7 159 54.7
Phvul.002G045100 Phaseolus vulgaris HOM05D007425 ORTHO05D009334 2.8e-27 126.3 173 53.2
Medtr5g038520 Medicago truncatula HOM05D007425 ORTHO05D009334 1.8e-26 123.6 160 56.2
TAR636G0682 Trochodendron aralioides HOM05D007425 ORTHO05D009334 3.1e-26 122.9 84 73.8
Potri.008G153400 Populus trichocarpa HOM05D007425 ORTHO05D009334 9.1e-26 121.3 175 48.6
Cfa015652 Carpinus fangiana HOM05D007425 ORTHO05D009334 3.5e-25 119.4 136 53.7
Dinv13997 Davidia involucrata HOM05D001000 ORTHO05D002976 1.3e-24 117.5 87 71.3
Gorai.006G239600 Gossypium raimondii HOM05D007425 ORTHO05D009334 1.3e-24 117.5 135 51.9
PGSC0003DMG400032277 Solanum tuberosum HOM05D007425 ORTHO05D009334 2.9e-24 116.3 82 75.6
CiPaw.01G166700 Carya illinoinensis HOM05D007425 ORTHO05D009334 3.8e-24 115.9 177 44.1
Ca_04746_v3 Cicer arietinum L. HOM05D007425 ORTHO05D009334 3.8e-24 115.9 76 76.3
Haze_00892 Corylus avellana HOM05D007425 ORTHO05D009334 5.0e-24 115.5 157 47.8
Lj3P734T17 Lonicera japonica HOM05D007425 ORTHO05D009334 5.0e-24 115.5 167 43.1
Lalb_Chr05g0211001 Lupinus albus HOM05D007425 ORTHO05D009334 5.0e-24 115.5 149 55.0
Gohir.D09G218600 Gossypium hirsutum HOM05D007425 ORTHO05D009334 1.1e-23 114.4 135 51.1
QL06p002223 Quercus lobata HOM05D007425 ORTHO05D009334 1.1e-23 114.4 83 71.1
CANSAT78G0262 Cannabis sativa HOM05D007425 ORTHO05D009334 1.5e-23 114.0 149 48.3
Nitab4.5_0004258g0010 Nicotiana tabacum HOM05D007425 ORTHO05D009334 1.5e-23 114.0 82 74.4
Sabra08G0117000 Salix brachista HOM05D007425 ORTHO05D009334 1.9e-23 113.6 179 46.9
Gohir.A09G216200 Gossypium hirsutum HOM05D007425 ORTHO05D009334 3.2e-23 112.8 135 51.1
Sopen09g030940 Solanum pennellii HOM05D007425 ORTHO05D009334 4.2e-23 112.5 169 45.0
Nn4g26476 Nelumbo nucifera HOM05D007425 ORTHO05D009334 7.2e-23 111.7 87 65.5
Thecc.04G232500 Theobroma cacao HOM05D007425 ORTHO05D009334 7.2e-23 111.7 84 71.4
CSS0011351 Camellia sinensis var. sinensis HOM05D007425 ORTHO05D009334 1.2e-22 110.9 82 69.5
RcHm_v2.0_Chr7g0190521 Rosa chinensis HOM05D007425 ORTHO05D009334 1.2e-22 110.9 82 73.2
HanXRQChr08g0229221 Helianthus annuus HOM05D007425 ORTHO05D009334 1.6e-22 110.5 79 70.9
Rhsim04G0201800 Rhododendron simsii HOM05D007425 ORTHO05D009334 1.6e-22 110.5 150 46.0
BcaC09g50166 Brassica carinata HOM05D007425 ORTHO05D009334 3.6e-22 109.4 111 56.8
C01p28260 Brassica napus HOM05D007425 ORTHO05D009334 3.6e-22 109.4 111 56.8
BolC1t02755H Brassica oleracea HOM05D007425 ORTHO05D009334 3.6e-22 109.4 111 56.8
Cc03_g03840 Coffea canephora HOM05D007425 ORTHO05D009334 4.7e-22 109.0 171 43.3
SGA_v2.0_scaffold39G15229 Striga asiatica HOM05D007425 ORTHO05D009334 6.1e-22 108.6 151 49.7
CAN.G490.15 Capsicum annuum HOM05D007425 ORTHO05D009334 8.0e-22 108.2 74 78.4
Atru.chr4.2458 Acer truncatum HOM05D007425 ORTHO05D009334 1.0e-21 107.8 83 67.5
Duzib151G0901 Durio zibethinus HOM05D007425 ORTHO05D009334 1.0e-21 107.8 84 71.4
BraA01t02180Z Brassica rapa HOM05D007425 ORTHO05D009334 1.4e-21 107.5 155 46.5
MD13G1193800 Malus domestica HOM05D007425 ORTHO05D009334 1.8e-21 107.1 121 52.9
Duzib212G0056 Durio zibethinus HOM05D007425 ORTHO05D009334 2.3e-21 106.7 171 45.6
PGR142G3696 Punica granatum HOM05D007425 ORTHO05D009334 2.3e-21 106.7 156 45.5
CARHR221470 Cardamine hirsuta HOM05D007425 ORTHO05D009334 3.0e-21 106.3 87 64.4
FAN13G1551 Fragaria x ananassa HOM05D007425 ORTHO05D009334 3.0e-21 106.3 171 43.9
Aa31LG9G2430 Aethionema arabicum HOM05D007425 ORTHO05D009334 4.0e-21 105.9 87 63.2
AL7G40980 Arabidopsis lyrata HOM05D007425 ORTHO05D009334 4.0e-21 105.9 87 64.4
BcaNung00324 Brassica carinata HOM05D007425 ORTHO05D009334 4.0e-21 105.9 156 45.5
MELO3C006532.2 Cucumis melo HOM05D007425 ORTHO05D009334 4.0e-21 105.9 82 72.0
Prupe.1G014400 Prunus persica HOM05D007425 ORTHO05D009334 4.0e-21 105.9 84 66.7
Sed0000110 Sechium edule HOM05D007425 ORTHO05D009334 6.8e-21 105.1 124 54.8
MSTRG.24738 Avicennia marina HOM05D007425 ORTHO05D009334 8.8e-21 104.8 79 69.6
DCAR_002385 Daucus carota HOM05D007425 ORTHO05D009334 8.8e-21 104.8 168 44.6
Oeu031224.1 Olea europaea HOM05D007425 ORTHO05D009334 8.8e-21 104.8 150 45.3
Oeu031227.1 Olea europaea HOM05D007425 ORTHO05D009334 8.8e-21 104.8 150 45.3
Oeu031228.1 Olea europaea HOM05D007425 ORTHO05D009334 8.8e-21 104.8 150 45.3
THA.LOC104822268 Tarenaya hassleriana HOM05D007425 ORTHO05D009334 8.8e-21 104.8 89 62.9
CsaV3_3G013300 Cucumis sativus L. HOM05D007425 ORTHO05D009334 1.2e-20 104.4 82 72.0
MBI16_g00841_MAGBIO Magnolia biondii HOM05D007425 ORTHO05D009334 1.5e-20 104.0 70 77.1
MD16G1194500 Malus domestica HOM05D007425 ORTHO05D009334 1.5e-20 104.0 84 66.7
SalBow3G4464 Salvia bowleyana HOM05D007425 ORTHO05D009334 1.5e-20 104.0 82 68.3
Sed0025719 Sechium edule HOM05D007425 ORTHO05D009334 1.5e-20 104.0 182 42.9
Cpa.g.sc9.287 Carica papaya HOM05D007425 ORTHO05D009334 2.0e-20 103.6 139 46.0
Thhalv10026366m.g Eutrema salsugineum HOM05D007425 ORTHO05D009334 2.6e-20 103.2 88 62.5
PSO017G2433 Papaver somniferum HOM05D007425 ORTHO05D009334 2.6e-20 103.2 87 63.2
PSO170G1990 Papaver somniferum HOM05D007425 ORTHO05D009334 2.6e-20 103.2 86 64.0
COL.COLO4_21483 Corchorus olitorius HOM05D007425 ORTHO05D009334 4.4e-20 102.4 170 48.2
Eucgr.B01085 Eucalyptus grandis HOM05D007425 ORTHO05D009334 5.7e-20 102.1 79 67.1
Aqoxy7G02632 Aquilegia oxysepala HOM05D007425 ORTHO05D009334 9.8e-20 101.3 65 75.4
Carub.0007s2724 Capsella rubella HOM05D007425 ORTHO05D009334 9.8e-20 101.3 151 46.4
CDE04G2079 Ceratophyllum demersum HOM05D007425 ORTHO05D009334 1.3e-19 100.9 65 72.3
Manes.03G178200 Manihot esculenta HOM05D007425 ORTHO05D009334 1.3e-19 100.9 136 50.7
THA.LOC104803027 Tarenaya hassleriana HOM05D007425 ORTHO05D009334 1.3e-19 100.9 143 44.8
Ah.14g089400 Amaranthus hybridus HOM05D007425 ORTHO05D009334 1.7e-19 100.5 82 67.1
Lsat_1_v5_gn_9_18440 Lactuca sativa HOM05D007425 ORTHO05D009334 1.7e-19 100.5 79 68.4
AT4G14870 Arabidopsis thaliana HOM05D007425 ORTHO05D009334 2.2e-19 100.1 151 48.3
Eucgr.L02493 Eucalyptus grandis HOM05D007425 ORTHO05D009334 2.2e-19 100.1 162 43.2
ECA247G1832 Erigeron canadensis HOM05D007425 ORTHO05D009334 2.8e-19 99.8 86 61.6
FAN04G2988 Fragaria x ananassa HOM05D007425 ORTHO05D009334 2.8e-19 99.8 166 42.8
TAR636G0596 Trochodendron aralioides HOM05D007425 ORTHO05D009334 2.8e-19 99.8 67 74.6
ATR0626G045 Amborella trichopoda HOM05D007425 ORTHO05D009334 6.3e-19 98.6 62 75.8
Eucgr.L01274 Eucalyptus grandis HOM05D007425 ORTHO05D009334 8.3e-19 98.2 162 42.6
Sp7g13010 Schrenkiella parvula HOM05D007425 ORTHO05D009334 8.3e-19 98.2 201 39.8
EL10Ac3g06446 Beta vulgaris HOM05D007425 ORTHO05D009334 1.1e-18 97.8 82 64.6
Zm00001eb375110 Zea mays HOM05D007425 ORTHO05D009334 1.1e-18 97.8 86 60.5
AUR62033636 Chenopodium quinoa HOM05D007425 ORTHO05D009334 1.4e-18 97.4 130 47.7
Ciclev10006055m.g Citrus clementina HOM05D007425 ORTHO05D009334 1.4e-18 97.4 73 69.9
HPP92_010419 Vanilla planifolia HOM05D007425 ORTHO05D009334 1.4e-18 97.4 86 61.6
Migut.G00341 Erythranthe guttata HOM05D007425 ORTHO05D009334 1.8e-18 97.1 172 40.1
FvH4_5g07900 Fragaria vesca HOM05D007425 ORTHO05D009334 1.8e-18 97.1 165 42.4
FAN18G2754 Fragaria x ananassa HOM05D007425 ORTHO05D009334 2.4e-18 96.7 184 40.8
Nitab4.5_0000043g0080 Nicotiana tabacum HOM05D007425 ORTHO05D009334 3.1e-18 96.3 176 45.5
unitig_32.g10818 Utricularia gibba HOM05D007425 ORTHO05D009334 4.1e-18 95.9 108 50.9
Sc13g0004450 Simmondsia chinensis HOM05D007425 ORTHO05D009334 2.7e-17 93.2 83 61.4
SEGI_06187 Sequoiadendron giganteum HOM05D007425 ORTHO05D009334 1.5e-15 87.4 77 57.1
SGA_v2.0_scaffold52G19002 Striga asiatica HOM05D006387 ORTHO05D008533 7.2e-15 85.1 70 67.1
Os04g0306750 Oryza sativa ssp. japonica HOM05D007425 ORTHO05D009334 2.8e-14 83.2 59 67.8
Pp3c2_27330 Physcomitrium patens HOM05D007425 ORTHO05D009334 2.3e-13 80.1 78 52.6
Mapoly0070s0085 Marchantia polymorpha HOM05D007425 ORTHO05D009334 3.7e-11 72.8 88 46.6
SMO358G0357 Selaginella moellendorffii HOM05D013303 ORTHO05D015288 1.1e-10 71.2 102 45.1
Os08g0399050 Oryza sativa ssp. japonica HOM05D007425 ORTHO05D009334 4.5e-09 65.9 75 53.3
CBR_g18894 Chara braunii HOM05D007425 ORTHO05D009334 5.0e-08 62.4 54 53.7
AUR62034746 Chenopodium quinoa HOM05D007425 ORTHO05D009334 3.6e-06 56.2 105 39.0


User provided reference genes

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