Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.CCWF18 Arachis hypogaea HOM05D007941 ORTHO05D010050 0.0e+00 1229.2 634 100.0
arahy.Tifrunner.gnm1.ann1.N60BY5 Arachis hypogaea HOM05D007941 ORTHO05D010050 0.0e+00 1129.0 634 92.3
Glyma.17G013700 Glycine max HOM05D007941 ORTHO05D010050 1.9e-209 733.0 688 63.1
Phvul.003G078500 Phaseolus vulgaris HOM05D007941 ORTHO05D010050 3.4e-206 722.2 702 61.1
VMungo1215G2837 Vigna mungo HOM05D007941 ORTHO05D010050 3.0e-202 709.1 686 61.2
Lj4g0020812 Lotus japonicus HOM05D007941 ORTHO05D010050 2.3e-194 682.9 685 59.4
Prupe.4G021200 Prunus persica HOM05D007941 ORTHO05D010050 8.4e-165 584.7 689 51.7
Haze_06797 Corylus avellana HOM05D007941 ORTHO05D010050 5.5e-164 582.0 704 52.4
Cfa000224 Carpinus fangiana HOM05D007941 ORTHO05D010050 9.3e-164 581.3 700 52.4
Ca_21085_v3 Cicer arietinum L. HOM05D007941 ORTHO05D010050 9.3e-164 581.3 650 53.8
TPR.G37125 Trifolium pratense HOM05D007941 ORTHO05D010050 6.7e-162 575.1 781 48.4
Thecc.06G220000 Theobroma cacao HOM05D007941 ORTHO05D010050 1.3e-160 570.9 704 50.4
MD05G1345700 Malus domestica HOM05D007941 ORTHO05D010050 8.2e-160 568.2 702 49.3
Manes.16G007400 Manihot esculenta HOM05D007941 ORTHO05D010050 9.0e-159 564.7 693 49.5
TWI38G0160 Tripterygium wilfordii HOM05D007941 ORTHO05D010050 9.0e-159 564.7 719 49.1
QL05p073215 Quercus lobata HOM05D007941 ORTHO05D010050 2.6e-158 563.1 710 51.4
RcHm_v2.0_Chr5g0003191 Rosa chinensis HOM05D007941 ORTHO05D010050 1.7e-157 560.5 686 50.9
Gorai.011G014100 Gossypium raimondii HOM05D007941 ORTHO05D010050 1.9e-156 557.0 666 49.2
MD10G1321100 Malus domestica HOM05D007941 ORTHO05D010050 1.9e-156 557.0 697 49.1
COL.COLO4_31770 Corchorus olitorius HOM05D007941 ORTHO05D010050 7.1e-156 555.1 680 50.3
FAN25G1443 Fragaria x ananassa HOM05D007941 ORTHO05D010050 7.1e-156 555.1 683 49.9
Potri.004G015401 Populus trichocarpa HOM05D007941 ORTHO05D010050 2.3e-154 550.1 700 49.9
Gohir.D10G012450 Gossypium hirsutum HOM05D007941 ORTHO05D010050 3.9e-154 549.3 671 49.0
Ciclev10017854m.g Citrus clementina HOM05D007941 ORTHO05D010050 1.8e-151 540.4 679 49.5
Gohir.A10G012680 Gossypium hirsutum HOM05D007941 ORTHO05D010050 4.1e-151 539.3 669 48.9
Sabra04G0007600 Salix brachista HOM05D007941 ORTHO05D010050 2.6e-150 536.6 713 46.7
Atru.chr10.2217 Acer truncatum HOM05D007941 ORTHO05D010050 3.4e-150 536.2 708 48.0
FvH4_3g02100 Fragaria vesca HOM05D007941 ORTHO05D010050 6.1e-147 525.4 669 48.6
CANSAT56G1781 Cannabis sativa HOM05D007941 ORTHO05D010050 8.8e-146 521.5 687 48.5
TAR627G0026 Trochodendron aralioides HOM05D007941 ORTHO05D010050 2.4e-143 513.5 721 47.7
Nn1g07127 Nelumbo nucifera HOM05D007941 ORTHO05D010050 1.3e-141 507.7 729 46.0
CsaV3_1G010790 Cucumis sativus L. HOM05D007941 ORTHO05D010050 2.9e-141 506.5 683 46.7
CiPaw.09G091700 Carya illinoinensis HOM05D007941 ORTHO05D010050 1.6e-139 500.7 480 56.9
Cpa.g.sc152.13 Carica papaya HOM05D007941 ORTHO05D010050 3.9e-138 496.1 704 46.4
Cc09_g01710 Coffea canephora HOM05D007941 ORTHO05D010050 1.5e-137 494.2 710 46.5
Actinidia26916 Actinidia chinensis HOM05D007941 ORTHO05D010050 2.0e-134 483.8 687 48.0
Sed0010816 Sechium edule HOM05D007941 ORTHO05D010050 1.0e-133 481.5 677 46.4
PSO832G2769 Papaver somniferum HOM05D007941 ORTHO05D010050 2.5e-132 476.9 689 46.4
ClCG03G004750 Citrullus lanatus HOM05D007941 ORTHO05D010050 3.2e-132 476.5 679 45.2
Lj1C1230T3 Lonicera japonica HOM05D007941 ORTHO05D010050 2.6e-129 466.8 534 51.1
MELO3C002458.2 Cucumis melo HOM05D007941 ORTHO05D010050 1.7e-125 454.1 691 44.0
PGR004G0641 Punica granatum HOM05D007941 ORTHO05D010050 2.8e-120 436.8 655 45.6
Dinv13890 Davidia involucrata HOM05D007941 ORTHO05D010050 9.1e-119 431.8 619 47.7
Nitab4.5_0012670g0020 Nicotiana tabacum HOM05D007941 ORTHO05D010050 5.9e-118 429.1 627 45.6
Solyc03g031660.1 Solanum lycopersicum HOM05D007941 ORTHO05D010050 8.5e-117 425.2 667 43.0
Medtr4g132080 Medicago truncatula HOM05D007941 ORTHO05D010050 2.5e-116 423.7 442 57.2
Sopen03g005520 Solanum pennellii HOM05D007941 ORTHO05D010050 9.4e-116 421.8 668 43.4
Nitab4.5_0007864g0050 Nicotiana tabacum HOM05D007941 ORTHO05D010050 1.9e-108 397.5 615 44.4
Nn1g03523 Nelumbo nucifera HOM05D007941 ORTHO05D010050 5.5e-108 396.0 370 55.9
AUR62012706 Chenopodium quinoa HOM05D007941 ORTHO05D010050 1.2e-107 394.8 535 46.4
CiPaw.09G091500 Carya illinoinensis HOM05D007941 ORTHO05D010050 8.3e-104 382.1 270 72.2
CDE05G3547 Ceratophyllum demersum HOM05D007941 ORTHO05D010050 3.5e-102 376.7 422 52.6
GSVIVG01012729001 Vitis vinifera HOM05D007941 ORTHO05D010050 4.6e-102 376.3 282 69.1
FAN21G2241 Fragaria x ananassa HOM05D007941 ORTHO05D010050 3.9e-101 373.2 345 58.0
Peaxi162Scf00502g00214 Petunia axillaris HOM05D007941 ORTHO05D010050 8.6e-101 372.1 681 39.9
Hma1.2p1_0749F.1_g212520 Hydrangea macrophylla HOM05D007941 ORTHO05D010050 5.6e-100 369.4 207 84.5
Hma1.2p1_0749F.1_g212543 Hydrangea macrophylla HOM05D007941 ORTHO05D010050 5.6e-100 369.4 207 84.5
Mapoly0124s0009 Marchantia polymorpha HOM05D007941 ORTHO05D010050 8.9e-98 362.1 461 46.9
EL10Ac8g20054 Beta vulgaris HOM05D007941 ORTHO05D010050 4.1e-95 353.2 589 42.3
Pp3c25_7620 Physcomitrium patens HOM05D007941 ORTHO05D010050 1.1e-90 338.6 610 39.5
Glyma.07G260250 Glycine max HOM05D007941 ORTHO05D010050 4.6e-70 270.0 362 47.5
MBI02_g07163_MAGBIO Magnolia biondii HOM05D007941 ORTHO05D010050 4.5e-49 200.3 285 44.6
SEGI_08485 Sequoiadendron giganteum HOM05D007941 ORTHO05D010050 2.2e-40 171.4 309 41.7
AUR62021948 Chenopodium quinoa HOM05D007941 ORTHO05D010050 2.9e-32 144.4 226 44.2
SEGI_17062 Sequoiadendron giganteum HOM05D007941 ORTHO05D010050 2.5e-28 131.3 70 81.4
Dinv20049 Davidia involucrata HOM05D007941 ORTHO05D010050 7.7e-25 119.8 202 40.6
AUR62021949 Chenopodium quinoa HOM05D007941 ORTHO05D010050 5.0e-24 117.1 266 36.8
Medtr4g132090 Medicago truncatula HOM05D007941 ORTHO05D010050 2.1e-22 111.7 136 50.7
SEGI_18097 Sequoiadendron giganteum HOM05D007941 ORTHO05D010050 1.4e-21 109.0 155 46.5
ATR0794G095 Amborella trichopoda HOM05D007941 ORTHO05D010050 2.8e-19 101.3 87 63.2
ATR0794G083 Amborella trichopoda HOM05D007941 ORTHO05D010050 4.8e-19 100.5 141 46.1
FAN21G0178 Fragaria x ananassa HOM05D007941 ORTHO05D010050 4.1e-18 97.4 120 53.3
Dinv20048 Davidia involucrata HOM05D007941 ORTHO05D010050 1.6e-17 95.5 112 57.1
Nn1g03524 Nelumbo nucifera HOM05D007941 ORTHO05D010050 1.6e-09 68.9 111 50.5


User provided reference genes

Program Settings