Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.0NMX6V Arachis hypogaea HOM05D006475 ORTHO05D007969 4.5e-75 285.4 271 100.0
arahy.Tifrunner.gnm1.ann1.CC5QNU Arachis hypogaea HOM05D006475 ORTHO05D007969 4.5e-75 285.4 271 100.0
arahy.Tifrunner.gnm1.ann1.Y3VSY6 Arachis hypogaea HOM05D006475 ORTHO05D007969 1.7e-58 230.3 252 83.3
arahy.Tifrunner.gnm1.ann1.17PB5S Arachis hypogaea HOM05D006475 ORTHO05D007969 6.8e-55 218.4 245 89.4
arahy.Tifrunner.gnm1.ann1.X7UPX8 Arachis hypogaea HOM05D006475 ORTHO05D007969 7.8e-51 204.9 282 83.7
arahy.Tifrunner.gnm1.ann1.SLXS5Y Arachis hypogaea HOM05D006475 ORTHO05D007969 3.8e-50 202.6 186 97.3
Lalb_Chr05g0215421 Lupinus albus HOM05D006475 ORTHO05D007969 5.4e-44 182.2 274 67.9
arahy.Tifrunner.gnm1.ann1.79230D Arachis hypogaea HOM05D006475 ORTHO05D007969 9.2e-44 181.4 245 73.5
Glyma.01G149900 Glycine max HOM05D006475 ORTHO05D007969 3.9e-42 176.0 260 68.8
Phvul.002G128300 Phaseolus vulgaris HOM05D006475 ORTHO05D007969 3.6e-40 169.5 264 67.4
Ca_25099_v3 Cicer arietinum L. HOM05D006475 ORTHO05D007969 1.8e-39 167.2 270 67.4
VMungo1215G2540 Vigna mungo HOM05D006475 ORTHO05D007969 1.2e-38 164.5 260 66.5
Medtr5g026800 Medicago truncatula HOM05D006475 ORTHO05D007969 1.9e-36 157.1 278 62.9
Glyma.09G214000 Glycine max HOM05D006475 ORTHO05D007969 3.2e-36 156.4 260 66.9
TPR.G17268 Trifolium pratense HOM05D006475 ORTHO05D007969 5.4e-36 155.6 269 73.2
Cfa012603 Carpinus fangiana HOM05D006475 ORTHO05D007969 5.1e-34 149.1 260 63.8
CiPaw.12G072000 Carya illinoinensis HOM05D006475 ORTHO05D007969 4.3e-33 146.0 259 62.9
Sabra03G0070600 Salix brachista HOM05D006475 ORTHO05D007969 4.4e-30 136.0 247 62.8
Manes.17G003100 Manihot esculenta HOM05D006475 ORTHO05D007969 1.3e-29 134.4 263 60.5
Haze_08058 Corylus avellana HOM05D006475 ORTHO05D007969 2.2e-29 133.7 272 59.6
Haze_08048 Corylus avellana HOM05D006475 ORTHO05D007969 8.3e-29 131.7 280 58.2
Potri.003G103400 Populus trichocarpa HOM05D006475 ORTHO05D007969 3.2e-28 129.8 247 61.9
Psat2g142320 Pisum sativum HOM05D006475 ORTHO05D007969 4.1e-28 129.4 184 77.7
Hma1.2p1_0544F.1_g175570 Hydrangea macrophylla HOM05D006475 ORTHO05D007969 7.1e-28 128.6 266 64.7
Potri.001G130500 Populus trichocarpa HOM05D006475 ORTHO05D007969 1.2e-27 127.9 262 59.2
Actinidia14740 Actinidia chinensis HOM05D006475 ORTHO05D007969 2.1e-27 127.1 258 61.6
BcaC09g51436 Brassica carinata HOM05D006475 ORTHO05D007969 2.7e-27 126.7 264 58.3
BolC1t01287H Brassica oleracea HOM05D006475 ORTHO05D007969 2.7e-27 126.7 264 58.3
PGR031G1524 Punica granatum HOM05D006475 ORTHO05D007969 7.8e-27 125.2 266 59.8
C01p13140 Brassica napus HOM05D006475 ORTHO05D007969 1.0e-26 124.8 80 76.2
Nitab4.5_0006541g0010 Nicotiana tabacum HOM05D006475 ORTHO05D007969 1.0e-26 124.8 261 58.6
Prupe.5G019900 Prunus persica HOM05D006475 ORTHO05D007969 1.0e-26 124.8 265 59.6
RcHm_v2.0_Chr7g0213461 Rosa chinensis HOM05D006475 ORTHO05D007969 1.3e-26 124.4 262 59.9
AL7G34940 Arabidopsis lyrata HOM05D006475 ORTHO05D007969 2.3e-26 123.6 274 58.0
A01p11110 Brassica napus HOM05D006475 ORTHO05D007969 2.3e-26 123.6 264 58.0
BraA01t01057Z Brassica rapa HOM05D006475 ORTHO05D007969 2.3e-26 123.6 264 58.0
Actinidia18163 Actinidia chinensis HOM05D006475 ORTHO05D007969 5.1e-26 122.5 262 61.8
Sp7g17850 Schrenkiella parvula HOM05D006475 ORTHO05D007969 5.1e-26 122.5 263 58.9
Eucgr.D02591 Eucalyptus grandis HOM05D006475 ORTHO05D007969 8.6e-26 121.7 264 61.4
CARHR226020 Cardamine hirsuta HOM05D006475 ORTHO05D007969 1.5e-25 120.9 263 57.4
Sopen08g001530 Solanum pennellii HOM05D006475 ORTHO05D007969 2.5e-25 120.2 261 57.9
Thecc.01G139200 Theobroma cacao HOM05D006475 ORTHO05D007969 2.5e-25 120.2 255 60.0
Lj8A334T74 Lonicera japonica HOM05D006475 ORTHO05D007969 3.3e-25 119.8 249 61.0
Nn3g19252 Nelumbo nucifera HOM05D006475 ORTHO05D007969 3.3e-25 119.8 261 58.2
Aa31LG6G1840 Aethionema arabicum HOM05D006475 ORTHO05D007969 5.6e-25 119.0 253 60.1
BcaNung04008 Brassica carinata HOM05D006475 ORTHO05D007969 9.5e-25 118.2 192 71.9
Thhalv10026017m.g Eutrema salsugineum HOM05D006475 ORTHO05D007969 1.2e-24 117.9 264 56.8
Lj2g0004034 Lotus japonicus HOM05D006475 ORTHO05D007969 1.2e-24 117.9 279 57.7
Cpa.g.sc137.18 Carica papaya HOM05D006475 ORTHO05D007969 1.6e-24 117.5 254 59.1
Nitab4.5_0001175g0100 Nicotiana tabacum HOM05D006475 ORTHO05D007969 2.1e-24 117.1 261 58.2
PGSC0003DMG400018460 Solanum tuberosum HOM05D006475 ORTHO05D007969 2.1e-24 117.1 261 61.7
TWI23G0232 Tripterygium wilfordii HOM05D006475 ORTHO05D007969 2.1e-24 117.1 249 61.4
SGA_v2.0_scaffold144G35881 Striga asiatica HOM05D006475 ORTHO05D007969 2.8e-24 116.7 73 76.7
Aqoxy7G00886 Aquilegia oxysepala HOM05D006475 ORTHO05D007969 3.6e-24 116.3 80 75.0
Carub.0007s2200 Capsella rubella HOM05D006475 ORTHO05D007969 4.7e-24 115.9 251 59.0
FAN13G3229 Fragaria x ananassa HOM05D006475 ORTHO05D007969 1.4e-23 114.4 248 61.3
Migut.E01351 Erythranthe guttata HOM05D006475 ORTHO05D007969 1.8e-23 114.0 80 68.8
Lsat_1_v5_gn_6_15221 Lactuca sativa HOM05D006475 ORTHO05D007969 1.8e-23 114.0 257 58.4
EL10Ac5g11923 Beta vulgaris HOM05D006475 ORTHO05D007969 2.4e-23 113.6 254 68.9
HanXRQChr08g0226771 Helianthus annuus HOM05D006475 ORTHO05D007969 2.4e-23 113.6 78 69.2
AT4G19150 Arabidopsis thaliana HOM05D006475 ORTHO05D007969 3.1e-23 113.2 178 75.3
MSTRG.1769 Avicennia marina HOM05D006475 ORTHO05D007969 4.0e-23 112.8 261 57.9
AUR62007413 Chenopodium quinoa HOM05D006475 ORTHO05D007969 4.0e-23 112.8 251 57.8
SalBow8G0939 Salvia bowleyana HOM05D006475 ORTHO05D007969 4.0e-23 112.8 258 57.4
CSS0010448 Camellia sinensis var. sinensis HOM05D006475 ORTHO05D007969 5.2e-23 112.5 263 58.2
Gohir.A05G381700 Gossypium hirsutum HOM05D006475 ORTHO05D007969 5.2e-23 112.5 71 74.6
Peaxi162Scf00045g00636 Petunia axillaris HOM05D006475 ORTHO05D007969 5.2e-23 112.5 267 56.6
FvH4_5g24000 Fragaria vesca HOM05D006475 ORTHO05D007969 6.8e-23 112.1 260 58.5
Gorai.012G037900 Gossypium raimondii HOM05D006475 ORTHO05D007969 6.8e-23 112.1 71 74.6
GSVIVG01022797001 Vitis vinifera HOM05D006475 ORTHO05D007969 6.8e-23 112.1 81 67.9
FAN08G1612 Fragaria x ananassa HOM05D006475 ORTHO05D007969 8.9e-23 111.7 248 60.5
FAN18G1960 Fragaria x ananassa HOM05D006475 ORTHO05D007969 8.9e-23 111.7 260 58.5
Rhsim07G0139200 Rhododendron simsii HOM05D006475 ORTHO05D007969 1.5e-22 110.9 258 57.4
DCAR_028235 Daucus carota HOM05D006475 ORTHO05D007969 2.0e-22 110.5 252 58.3
Gohir.D04G033600 Gossypium hirsutum HOM05D006475 ORTHO05D007969 2.0e-22 110.5 71 74.6
PSO675G8107 Papaver somniferum HOM05D006475 ORTHO05D007969 2.0e-22 110.5 184 75.0
Hund11101 Selenicereus undatus HOM05D006475 ORTHO05D007969 2.0e-22 110.5 268 55.2
FAN04G1597 Fragaria x ananassa HOM05D006475 ORTHO05D007969 2.6e-22 110.2 261 58.2
THA.LOC104812889 Tarenaya hassleriana HOM05D006475 ORTHO05D007969 2.6e-22 110.2 256 57.0
AUR62027319 Chenopodium quinoa HOM05D006475 ORTHO05D007969 4.4e-22 109.4 253 56.5
unitig_0.g2207 Utricularia gibba HOM05D006475 ORTHO05D007969 9.9e-22 108.2 201 69.7
Ah.12g056010 Amaranthus hybridus HOM05D006475 ORTHO05D007969 1.7e-21 107.5 259 55.6
CDE11G0189 Ceratophyllum demersum HOM05D006475 ORTHO05D007969 2.2e-21 107.1 262 55.7
CAN.G320.16 Capsicum annuum HOM05D006475 ORTHO05D007969 2.9e-21 106.7 265 56.6
Solyc08g005520.3 Solanum lycopersicum HOM05D006475 ORTHO05D007969 3.8e-21 106.3 271 55.4
Ciclev10005760m.g Citrus clementina HOM05D006475 ORTHO05D007969 4.9e-21 105.9 254 58.7
Dinv28010 Davidia involucrata HOM05D006475 ORTHO05D007969 4.9e-21 105.9 70 70.0
CANSAT21G0913 Cannabis sativa HOM05D006475 ORTHO05D007969 6.4e-21 105.5 186 71.0
ECA233G2922 Erigeron canadensis HOM05D006475 ORTHO05D007969 8.4e-21 105.1 82 65.9
Duzib187G1769 Durio zibethinus HOM05D006475 ORTHO05D007969 1.1e-20 104.8 249 57.0
Gohir.D03G018700 Gossypium hirsutum HOM05D006475 ORTHO05D007969 1.1e-20 104.8 71 70.4
Cc08_g05010 Coffea canephora HOM05D006475 ORTHO05D007969 1.9e-20 104.0 250 43.6
HPP92_021118 Vanilla planifolia HOM05D006475 ORTHO05D007969 4.2e-20 102.8 193 65.8
PSO717G0136 Papaver somniferum HOM05D006475 ORTHO05D007969 7.1e-20 102.1 262 54.2
vmacro17427 Vaccinium macrocarpon HOM05D006475 ORTHO05D007969 6.0e-19 99.0 101 52.5
Os10g0580700 Oryza sativa ssp. japonica HOM05D006475 ORTHO05D007969 1.7e-18 97.4 67 70.1
AagrBONN_evm.TU.Sc2ySwM_228.4166 Anthoceros agrestis HOM05D006475 ORTHO05D007969 2.5e-17 93.6 77 57.1
Zm00001eb025510 Zea mays HOM05D006475 ORTHO05D007969 7.3e-17 92.0 252 57.5
C03p81780 Brassica napus HOM05D006475 ORTHO05D007969 1.1e-15 88.2 68 64.7
Mapoly0051s0035 Marchantia polymorpha HOM05D006475 ORTHO05D007969 4.0e-15 86.3 67 61.2
BolC3t20450H Brassica oleracea HOM05D006475 ORTHO05D007969 9.0e-15 85.1 68 63.2
SEGI_07236 Sequoiadendron giganteum HOM05D006475 ORTHO05D007969 2.0e-14 84.0 72 56.9
QL08p050707 Quercus lobata HOM05D006475 ORTHO05D007969 9.9e-14 81.6 217 59.0
CsaV3_3G040920 Cucumis sativus L. HOM05D006475 ORTHO05D007969 1.9e-12 77.4 278 56.5
ClCG10G015530 Citrullus lanatus HOM05D000058 ORTHO05D000077 4.2e-12 76.3 63 60.3
Sed0010053 Sechium edule HOM05D006475 ORTHO05D007969 7.3e-09 65.5 265 61.1
Pp3c7_14210 Physcomitrium patens HOM05D006475 ORTHO05D007969 2.1e-08 63.9 51 52.9
CBR_g41202 Chara braunii HOM05D006475 ORTHO05D007969 2.4e-07 60.5 44 61.4
Nitab4.5_0000532g0060 Nicotiana tabacum HOM05D006475 ORTHO05D007969 2.4e-07 60.5 33 81.8
FAN18G4370 Fragaria x ananassa HOM05D006475 ORTHO05D007969 5.3e-07 59.3 214 57.5
QL08p050705 Quercus lobata HOM05D006475 ORTHO05D007969 1.5e-06 57.8 54 64.8
Oeu042209.2 Olea europaea HOM05D006475 ORTHO05D007969 2.0e-06 57.4 391 37.3
TAR375G0514 Trochodendron aralioides HOM05D006475 ORTHO05D007969 2.0e-06 57.4 214 56.5
Glyma.10G238000 Glycine max HOM05D001854 ORTHO05D001800 4.5e-06 56.2 65 49.2
ClCG01G005510 Citrullus lanatus HOM05D001854 ORTHO05D001800 7.6e-06 55.5 65 49.2
MELO3C005379.2 Cucumis melo HOM05D001854 ORTHO05D001800 7.6e-06 55.5 65 49.2
CsaV3_5G005740 Cucumis sativus L. HOM05D001854 ORTHO05D001800 7.6e-06 55.5 65 49.2
Manes.14G027900 Manihot esculenta HOM05D001854 ORTHO05D001800 7.6e-06 55.5 65 49.2
Nitab4.5_0001175g0110 Nicotiana tabacum HOM05D006475 ORTHO05D007969 7.6e-06 55.5 214 27.6
Ca_10787_v3 Cicer arietinum L. HOM05D001854 ORTHO05D001800 9.9e-06 55.1 65 47.7
Prupe.2G291800 Prunus persica HOM05D001854 ORTHO05D001800 9.9e-06 55.1 65 47.7


User provided reference genes

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