Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.C8UBJW Arachis hypogaea HOM05D007542 ORTHO05D009519 5.9e-84 314.3 176 100.0
arahy.Tifrunner.gnm1.ann1.T42YYR Arachis hypogaea HOM05D007542 ORTHO05D009519 2.7e-81 305.4 176 97.2
Phvul.006G046800 Phaseolus vulgaris HOM05D007542 ORTHO05D009519 4.6e-36 155.2 186 59.1
Lalb_Chr04g0248281 Lupinus albus HOM05D007542 ORTHO05D009519 7.8e-36 154.5 178 58.4
Medtr5g093430 Medicago truncatula HOM05D007542 ORTHO05D009519 7.8e-36 154.5 187 54.5
Glyma.18G092800 Glycine max HOM05D007542 ORTHO05D009519 1.3e-35 153.7 186 57.5
LjContig00272g0021523 Lotus japonicus HOM05D007542 ORTHO05D009519 3.0e-35 152.5 189 56.1
Glyma.08G319700 Glycine max HOM05D007542 ORTHO05D009519 3.3e-34 149.1 186 56.5
TPR.G17892 Trifolium pratense HOM05D007542 ORTHO05D009519 3.6e-33 145.6 185 51.9
Phvul.008G269700 Phaseolus vulgaris HOM05D007542 ORTHO05D009519 4.7e-33 145.2 180 55.6
Medtr5g093440 Medicago truncatula HOM05D007542 ORTHO05D009519 1.2e-31 140.6 188 49.5
TPR.G1179 Trifolium pratense HOM05D007542 ORTHO05D009519 1.5e-31 140.2 189 49.7
Lj6g0015208 Lotus japonicus HOM05D007542 ORTHO05D009519 5.8e-31 138.3 182 52.2
Psat2g012360 Pisum sativum HOM05D007542 ORTHO05D009519 9.9e-31 137.5 182 51.6
Glyma.14G021700 Glycine max HOM05D007542 ORTHO05D009519 2.2e-30 136.3 188 50.0
VMungo0647G1207 Vigna mungo HOM05D007542 ORTHO05D009519 3.8e-30 135.6 186 52.7
Ca_06340_v3 Cicer arietinum L. HOM05D007542 ORTHO05D009519 8.4e-30 134.4 179 50.3
Psat2g012400 Pisum sativum HOM05D007542 ORTHO05D009519 4.1e-29 132.1 185 50.3
Ca_25812_v3 Cicer arietinum L. HOM05D007542 ORTHO05D009519 7.1e-29 131.3 185 51.4
Duzib170G0581 Durio zibethinus HOM05D007542 ORTHO05D009519 1.2e-25 120.6 182 48.4
arahy.Tifrunner.gnm1.ann1.ENS6UV Arachis hypogaea HOM05D007542 ORTHO05D009519 3.6e-25 119.0 173 49.1
Gohir.D01G069700 Gossypium hirsutum HOM05D007542 ORTHO05D009519 4.7e-25 118.6 181 44.2
Gorai.002G092100 Gossypium raimondii HOM05D007542 ORTHO05D009519 4.7e-25 118.6 181 43.6
TAR643G0006 Trochodendron aralioides HOM05D007542 ORTHO05D009519 8.1e-25 117.9 185 47.0
Lj6g0001233 Lotus japonicus HOM05D007542 ORTHO05D009519 1.1e-24 117.5 236 42.8
Manes.03G133100 Manihot esculenta HOM05D007542 ORTHO05D009519 1.1e-24 117.5 189 47.1
Hma1.2p1_1332F.1_g276050 Hydrangea macrophylla HOM05D007542 ORTHO05D009519 2.4e-24 116.3 184 45.7
Cpa.g.sc12.265 Carica papaya HOM05D007542 ORTHO05D009519 1.2e-23 114.0 183 47.0
VMungo0540G1120 Vigna mungo HOM05D007542 ORTHO05D009519 3.4e-23 112.5 175 48.0
Potri.011G087000 Populus trichocarpa HOM05D007542 ORTHO05D009519 4.4e-23 112.1 191 42.9
Thecc.07G031100 Theobroma cacao HOM05D007542 ORTHO05D009519 4.4e-23 112.1 181 45.3
Dinv40786 Davidia involucrata HOM05D007542 ORTHO05D009519 1.3e-22 110.5 173 43.9
Ciclev10009585m.g Citrus clementina HOM05D007542 ORTHO05D009519 2.2e-22 109.8 185 47.6
Medtr3g053160 Medicago truncatula HOM05D007542 ORTHO05D009519 2.2e-22 109.8 181 42.5
Nn1g03444 Nelumbo nucifera HOM05D007542 ORTHO05D009519 2.2e-22 109.8 200 41.0
GSVIVG01037700001 Vitis vinifera HOM05D007542 ORTHO05D009519 2.2e-22 109.8 191 46.1
Dinv22244 Davidia involucrata HOM05D007542 ORTHO05D009519 3.8e-22 109.0 184 46.2
Sabra11G0071000 Salix brachista HOM05D007542 ORTHO05D009519 3.8e-22 109.0 188 43.6
CSS0027066 Camellia sinensis var. sinensis HOM05D007542 ORTHO05D009519 4.9e-22 108.6 182 46.2
Cfa020302 Carpinus fangiana HOM05D007542 ORTHO05D009519 4.9e-22 108.6 183 46.4
TWI38G0725 Tripterygium wilfordii HOM05D007542 ORTHO05D009519 6.4e-22 108.2 190 46.3
QL08p006891 Quercus lobata HOM05D007542 ORTHO05D009519 2.4e-21 106.3 194 43.3
MELO3C014190.2 Cucumis melo HOM05D007542 ORTHO05D009519 7.1e-21 104.8 183 43.7
FAN21G0453 Fragaria x ananassa HOM05D007542 ORTHO05D009519 1.2e-20 104.0 206 38.8
FAN16G3720 Fragaria x ananassa HOM05D007542 ORTHO05D009519 1.6e-20 103.6 206 38.3
RcHm_v2.0_Chr5g0040991 Rosa chinensis HOM05D007542 ORTHO05D009519 1.6e-20 103.6 201 41.3
Eucgr.F00716 Eucalyptus grandis HOM05D007542 ORTHO05D009519 2.1e-20 103.2 201 42.3
COL.COLO4_09703 Corchorus olitorius HOM05D007542 ORTHO05D009519 2.7e-20 102.8 193 39.9
CsaV3_3G004930 Cucumis sativus L. HOM05D007542 ORTHO05D009519 6.0e-20 101.7 183 42.6
FvH4_3g23270 Fragaria vesca HOM05D007542 ORTHO05D009519 6.0e-20 101.7 207 38.6
Prupe.4G220300 Prunus persica HOM05D007542 ORTHO05D009519 1.0e-19 100.9 196 43.4
TAR626G0917 Trochodendron aralioides HOM05D007542 ORTHO05D009519 3.0e-19 99.4 177 44.1
Rhsim06G0222000 Rhododendron simsii HOM05D007542 ORTHO05D009519 3.9e-19 99.0 169 42.0
Atru.chr2.3499 Acer truncatum HOM05D007542 ORTHO05D009519 6.6e-19 98.2 216 40.7
Actinidia05075 Actinidia chinensis HOM05D007542 ORTHO05D009519 8.7e-19 97.8 160 46.2
FAN25G0364 Fragaria x ananassa HOM05D007542 ORTHO05D009519 8.7e-19 97.8 197 41.1
FAN25G1685 Fragaria x ananassa HOM05D007542 ORTHO05D009519 8.7e-19 97.8 197 41.1
FAN11G1962 Fragaria x ananassa HOM05D007542 ORTHO05D009519 7.3e-18 94.7 197 38.6
Nitab4.5_0000328g0130 Nicotiana tabacum HOM05D007542 ORTHO05D009519 7.3e-18 94.7 178 44.9
Cc05_g14120 Coffea canephora HOM05D007542 ORTHO05D009519 1.3e-17 94.0 197 38.6
Prupe.4G220200 Prunus persica HOM05D007542 ORTHO05D009519 1.6e-17 93.6 194 43.8
DCAR_016720 Daucus carota HOM05D007542 ORTHO05D009519 6.2e-17 91.7 204 39.7
CAN.G492.20 Capsicum annuum HOM05D007542 ORTHO05D009519 1.1e-16 90.9 207 40.1
Sc16g0005830 Simmondsia chinensis HOM05D007542 ORTHO05D009519 1.8e-16 90.1 174 37.4
Sopen07g033030 Solanum pennellii HOM05D007542 ORTHO05D009519 1.2e-15 87.4 171 39.2
MSTRG.6947 Avicennia marina HOM05D007542 ORTHO05D009519 1.5e-15 87.0 175 40.6
MBI10_g09179_MAGBIO Magnolia biondii HOM05D007542 ORTHO05D009519 2.0e-15 86.7 177 42.4
MD03G1195800 Malus domestica HOM05D007542 ORTHO05D009519 2.6e-15 86.3 202 39.6
MD11G1212200 Malus domestica HOM05D007542 ORTHO05D009519 3.4e-15 85.9 199 41.7
PGSC0003DMG400014384 Solanum tuberosum HOM05D007542 ORTHO05D009519 3.4e-15 85.9 210 37.1
Oeu008012.1 Olea europaea HOM05D007542 ORTHO05D009519 4.5e-15 85.5 168 37.5
CiPaw.11G192900 Carya illinoinensis HOM05D007542 ORTHO05D009519 1.3e-14 84.0 195 39.5
TAR624G0015 Trochodendron aralioides HOM05D007542 ORTHO05D009519 1.3e-14 84.0 173 42.8
PSO541G2394 Papaver somniferum HOM05D007542 ORTHO05D009519 3.8e-14 82.4 220 35.0
MSTRG.12988 Avicennia marina HOM05D007542 ORTHO05D009519 8.4e-14 81.3 172 38.4
Nitab4.5_0002826g0080 Nicotiana tabacum HOM05D007542 ORTHO05D009519 8.4e-14 81.3 184 40.2
Aqoxy1G03049 Aquilegia oxysepala HOM05D007542 ORTHO05D009519 1.4e-13 80.5 191 37.7
CAN.G337.69 Capsicum annuum HOM05D007542 ORTHO05D009519 1.4e-13 80.5 171 39.8
Nn1g07236 Nelumbo nucifera HOM05D007542 ORTHO05D009519 1.9e-13 80.1 195 34.9
Oeu026398.1 Olea europaea HOM05D007542 ORTHO05D009519 2.4e-13 79.7 186 34.4
PGSC0003DMG400022335 Solanum tuberosum HOM05D007542 ORTHO05D009519 3.2e-13 79.3 156 37.8
Sc03g0008420 Simmondsia chinensis HOM05D007542 ORTHO05D009519 5.4e-13 78.6 175 39.4
Hma1.2p1_3935F.1_g338010 Hydrangea macrophylla HOM05D007542 ORTHO05D009519 6.0e-12 75.1 67 64.2
Migut.H01805 Erythranthe guttata HOM05D007542 ORTHO05D009519 1.3e-11 73.9 167 36.5
Solyc10g006150.3 Solanum lycopersicum HOM05D007542 ORTHO05D009519 3.9e-11 72.4 209 34.9
Peaxi162Scf00235g00059 Petunia axillaris HOM05D007542 ORTHO05D009519 5.1e-11 72.0 148 37.2
Lj1P878T38 Lonicera japonica HOM05D007542 ORTHO05D009519 4.3e-10 68.9 74 56.8
Manes.15G067900 Manihot esculenta HOM05D007542 ORTHO05D009519 2.1e-09 66.6 63 65.1
Nitab4.5_0004829g0120 Nicotiana tabacum HOM05D007542 ORTHO05D009519 2.1e-09 66.6 157 35.7
Gohir.A01G083201 Gossypium hirsutum HOM05D007542 ORTHO05D009519 4.0e-08 62.4 81 49.4
ATR0772G056 Amborella trichopoda HOM05D007542 ORTHO05D009519 8.4e-06 54.7 63 41.3
Aqoxy1G03452 Aquilegia oxysepala HOM05D007542 ORTHO05D009519 8.4e-06 54.7 139 35.3
EL10Ac4g07752 Beta vulgaris HOM05D007542 ORTHO05D009519 8.4e-06 54.7 193 31.6


User provided reference genes

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