Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.C8HW3T Arachis hypogaea HOM05D007442 ORTHO05D009284 3.6e-64 248.1 122 100.0
arahy.Tifrunner.gnm1.ann1.8YE7LP Arachis hypogaea HOM05D007442 ORTHO05D009284 1.0e-63 246.5 122 99.2
Glyma.02G308900 Glycine max HOM05D007442 ORTHO05D009284 2.9e-45 185.3 122 80.3
Phvul.008G289000 Phaseolus vulgaris HOM05D007442 ORTHO05D009284 9.2e-44 180.3 122 78.7
LjContig00081g0000923 Lotus japonicus HOM05D007442 ORTHO05D009284 1.2e-43 179.9 122 78.7
VMungo0647G0872 Vigna mungo HOM05D007442 ORTHO05D009284 1.6e-43 179.5 123 78.9
GSVIVG01030083001 Vitis vinifera HOM05D007442 ORTHO05D009284 5.8e-38 161.0 122 71.3
ClCG02G009230 Citrullus lanatus HOM05D007442 ORTHO05D009284 3.7e-37 158.3 123 69.1
Dinv21296 Davidia involucrata HOM05D007442 ORTHO05D009284 3.7e-37 158.3 122 68.0
TPR.G35906 Trifolium pratense HOM05D007442 ORTHO05D009284 1.9e-36 156.0 123 71.5
FvH4_6g40630 Fragaria vesca HOM05D007442 ORTHO05D009284 2.4e-36 155.6 123 68.3
FAN02G0623 Fragaria x ananassa HOM05D007442 ORTHO05D009284 2.4e-36 155.6 123 68.3
FAN09G1668 Fragaria x ananassa HOM05D007442 ORTHO05D009284 2.4e-36 155.6 123 68.3
FAN14G4407 Fragaria x ananassa HOM05D007442 ORTHO05D009284 2.4e-36 155.6 123 68.3
Glyma.14G004000 Glycine max HOM05D007442 ORTHO05D009284 2.4e-36 155.6 122 71.3
FAN05G2406 Fragaria x ananassa HOM05D007442 ORTHO05D009284 3.2e-36 155.2 123 68.3
Dinv26606 Davidia involucrata HOM05D007442 ORTHO05D009284 4.1e-36 154.8 122 69.7
CsaV3_6G009590 Cucumis sativus L. HOM05D007442 ORTHO05D009284 5.4e-36 154.5 125 68.8
Nn1g07499 Nelumbo nucifera HOM05D007442 ORTHO05D009284 9.2e-36 153.7 108 73.1
CiPaw.03G281600 Carya illinoinensis HOM05D007442 ORTHO05D009284 1.2e-35 153.3 125 68.0
MD17G1116900 Malus domestica HOM05D007442 ORTHO05D009284 1.2e-35 153.3 127 67.7
CANSAT80G0988 Cannabis sativa HOM05D007442 ORTHO05D009284 2.1e-35 152.5 122 67.2
Prupe.3G197600 Prunus persica HOM05D007442 ORTHO05D009284 2.1e-35 152.5 124 68.5
Actinidia35204 Actinidia chinensis HOM05D007442 ORTHO05D009284 2.7e-35 152.1 122 67.2
Gohir.D07G198200 Gossypium hirsutum HOM05D007442 ORTHO05D009284 4.6e-35 151.4 122 67.2
Gorai.001G221800 Gossypium raimondii HOM05D007442 ORTHO05D009284 4.6e-35 151.4 122 67.2
RcHm_v2.0_Chr2g0156001 Rosa chinensis HOM05D007442 ORTHO05D009284 4.6e-35 151.4 123 69.1
Gohir.A07G191900 Gossypium hirsutum HOM05D007442 ORTHO05D009284 6.0e-35 151.0 122 67.2
Lalb_Chr04g0247091 Lupinus albus HOM05D007442 ORTHO05D009284 1.7e-34 149.4 126 67.5
Medtr5g098530 Medicago truncatula HOM05D007442 ORTHO05D009284 1.7e-34 149.4 121 68.6
Potri.014G167300 Populus trichocarpa HOM05D007442 ORTHO05D009284 2.3e-34 149.1 123 67.5
BcaC06g35915 Brassica carinata HOM05D007442 ORTHO05D009284 3.9e-34 148.3 129 64.3
BolC7t41415H Brassica oleracea HOM05D007442 ORTHO05D009284 3.9e-34 148.3 129 64.3
Cfa014227 Carpinus fangiana HOM05D007442 ORTHO05D009284 6.6e-34 147.5 121 66.1
Sabra14G0127300 Salix brachista HOM05D007442 ORTHO05D009284 6.6e-34 147.5 122 64.8
Thhalv10002726m.g Eutrema salsugineum HOM05D007442 ORTHO05D009284 8.6e-34 147.1 129 64.3
SGA_v2.0_scaffold49G18406 Striga asiatica HOM05D007442 ORTHO05D009284 8.6e-34 147.1 87 82.8
Duzib138G0628 Durio zibethinus HOM05D007442 ORTHO05D009284 1.1e-33 146.7 122 66.4
Sed0005163 Sechium edule HOM05D007442 ORTHO05D009284 1.1e-33 146.7 127 64.6
PGR083G2291 Punica granatum HOM05D007442 ORTHO05D009284 1.9e-33 146.0 134 64.9
Thecc.01G195900 Theobroma cacao HOM05D007442 ORTHO05D009284 1.9e-33 146.0 122 67.2
Sc06g0009910 Simmondsia chinensis HOM05D007442 ORTHO05D009284 2.5e-33 145.6 115 70.4
C07p09770 Brassica napus HOM05D007442 ORTHO05D009284 5.6e-33 144.4 129 63.6
CSS0032520 Camellia sinensis var. sinensis HOM05D007442 ORTHO05D009284 5.6e-33 144.4 122 64.8
Haze_12630 Corylus avellana HOM05D007442 ORTHO05D009284 5.6e-33 144.4 118 68.6
Manes.12G065601 Manihot esculenta HOM05D007442 ORTHO05D009284 5.6e-33 144.4 125 66.4
BcaB06g26827 Brassica carinata HOM05D007442 ORTHO05D009284 7.3e-33 144.1 125 62.4
Eucgr.H00878 Eucalyptus grandis HOM05D007442 ORTHO05D009284 7.3e-33 144.1 111 68.5
QL04p068504 Quercus lobata HOM05D007442 ORTHO05D009284 7.3e-33 144.1 122 66.4
THA.LOC104826628 Tarenaya hassleriana HOM05D007442 ORTHO05D009284 7.3e-33 144.1 124 65.3
BraA07t28440Z Brassica rapa HOM05D007442 ORTHO05D009284 1.2e-32 143.3 125 64.0
TWI18G1416 Tripterygium wilfordii HOM05D007442 ORTHO05D009284 1.2e-32 143.3 123 64.2
Sed0010901 Sechium edule HOM05D007442 ORTHO05D009284 1.6e-32 142.9 122 63.9
C05p43360 Brassica napus HOM05D007442 ORTHO05D009284 3.6e-32 141.7 125 64.0
Sp3g23760 Schrenkiella parvula HOM05D007442 ORTHO05D009284 6.2e-32 141.0 104 72.1
AL3G42820 Arabidopsis lyrata HOM05D007442 ORTHO05D009284 8.1e-32 140.6 104 72.1
AT4G13500 Arabidopsis thaliana HOM05D007442 ORTHO05D009284 8.1e-32 140.6 102 71.6
Carub.0003s2673 Capsella rubella HOM05D007442 ORTHO05D009284 8.1e-32 140.6 78 85.9
Cc00_g11580 Coffea canephora HOM05D007442 ORTHO05D009284 8.1e-32 140.6 126 63.5
Duzib211G0040 Durio zibethinus HOM05D007442 ORTHO05D009284 1.1e-31 140.2 126 63.5
Lj8A135T99 Lonicera japonica HOM05D007442 ORTHO05D009284 3.1e-31 138.7 127 61.4
MSTRG.12248 Avicennia marina HOM05D007442 ORTHO05D009284 4.0e-31 138.3 120 64.2
EL10Ac9g22680 Beta vulgaris HOM05D007442 ORTHO05D009284 4.0e-31 138.3 119 59.7
TWI36G1704 Tripterygium wilfordii HOM05D007442 ORTHO05D009284 4.0e-31 138.3 125 65.6
Aa31LG5G16680 Aethionema arabicum HOM05D001040 ORTHO05D002795 5.2e-31 137.9 131 61.8
Oeu064352.1 Olea europaea HOM05D007442 ORTHO05D009284 5.2e-31 137.9 122 61.5
Lsat_1_v5_gn_7_96821 Lactuca sativa HOM05D007442 ORTHO05D009284 1.2e-30 136.7 129 60.5
HanXRQChr11g0329011 Helianthus annuus HOM05D007442 ORTHO05D009284 3.4e-30 135.2 105 67.6
PGSC0003DMG400018833 Solanum tuberosum HOM05D007442 ORTHO05D009284 5.8e-30 134.4 103 67.0
Psat2g002440 Pisum sativum HOM05D007442 ORTHO05D009284 9.9e-30 133.7 73 86.3
PSO210G6456 Papaver somniferum HOM05D007442 ORTHO05D009284 1.3e-29 133.3 125 61.6
Ciclev10017197m.g Citrus clementina HOM05D007442 ORTHO05D009284 1.7e-29 132.9 125 60.8
PSO302G0215 Papaver somniferum HOM05D007442 ORTHO05D009284 2.2e-29 132.5 125 60.8
ECA236G2600 Erigeron canadensis HOM05D007442 ORTHO05D009284 4.9e-29 131.3 125 59.2
Sopen05g019430 Solanum pennellii HOM05D007442 ORTHO05D009284 4.9e-29 131.3 77 79.2
Os03g0595300 Oryza sativa ssp. japonica HOM05D007442 ORTHO05D009284 6.4e-29 131.0 78 80.8
Peaxi162Scf00147g01918 Petunia axillaris HOM05D007442 ORTHO05D009284 8.4e-29 130.6 125 57.6
Solyc05g024430.3 Solanum lycopersicum HOM05D007442 ORTHO05D009284 1.4e-28 129.8 77 79.2
Zm00001eb049770 Zea mays HOM05D007442 ORTHO05D009284 1.4e-28 129.8 78 83.3
MD09G1126600 Malus domestica HOM05D007442 ORTHO05D009284 1.9e-28 129.4 74 86.5
Nitab4.5_0000006g0670 Nicotiana tabacum HOM05D007442 ORTHO05D009284 1.9e-28 129.4 125 59.2
TAR629G1602 Trochodendron aralioides HOM05D007442 ORTHO05D009284 3.2e-28 128.6 67 89.6
Nitab4.5_0002154g0020 Nicotiana tabacum HOM05D007442 ORTHO05D009284 4.2e-28 128.3 125 58.4
DCAR_021093 Daucus carota HOM05D007442 ORTHO05D009284 5.4e-28 127.9 123 56.1
unitig_62.g23255 Utricularia gibba HOM05D007442 ORTHO05D009284 5.4e-28 127.9 126 58.7
Atru.BG.34.p Acer truncatum HOM05D007442 ORTHO05D009284 6.0e-27 124.4 69 84.1
vmacro09481 Vaccinium macrocarpon HOM05D007442 ORTHO05D009284 1.3e-26 123.2 154 46.8
Migut.H01284 Erythranthe guttata HOM05D007442 ORTHO05D009284 8.7e-26 120.6 102 60.8
SEGI_21691 Sequoiadendron giganteum HOM05D007442 ORTHO05D009284 1.1e-25 120.2 115 56.5
CDE04G1945 Ceratophyllum demersum HOM05D007442 ORTHO05D009284 8.1e-24 114.0 72 77.8
Mapoly0072s0101 Marchantia polymorpha HOM05D007442 ORTHO05D009284 1.7e-21 106.3 71 66.2
SMO364G0127 Selaginella moellendorffii HOM05D007442 ORTHO05D009284 3.8e-21 105.1 70 67.1
MBI16_g07768_MAGBIO Magnolia biondii HOM05D007442 ORTHO05D009284 1.4e-20 103.2 48 97.9
CARHR103090 Cardamine hirsuta HOM05D007442 ORTHO05D009284 4.2e-20 101.7 49 93.9
Rhsim04G0028000 Rhododendron simsii HOM05D000264 ORTHO05D009284 8.1e-16 87.4 58 69.0
Pp3c21_15030 Physcomitrium patens HOM05D007442 ORTHO05D009284 4.0e-15 85.1 70 55.7
AagrBONN_evm.TU.Sc2ySwM_368.44 Anthoceros agrestis HOM05D007442 ORTHO05D009284 2.6e-14 82.4 52 67.3
Cre03.g151200 Chlamydomonas reinhardtii HOM05D007442 ORTHO05D009284 7.9e-11 70.9 78 47.4
MELO3C025961.2 Cucumis melo HOM05D007442 ORTHO05D009284 1.5e-06 56.6 80 48.8


User provided reference genes

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