Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.C7KMBV Arachis hypogaea HOM05D004293 ORTHO05D005044 1.4e-171 606.3 337 100.0
arahy.Tifrunner.gnm1.ann1.IMH851 Arachis hypogaea HOM05D004293 ORTHO05D005044 6.3e-50 202.2 116 88.8
arahy.Tifrunner.gnm1.ann1.KUDP7J Arachis hypogaea HOM05D004293 ORTHO05D005044 5.3e-49 199.1 113 88.5
arahy.Tifrunner.gnm1.ann1.D196G9 Arachis hypogaea HOM05D004293 ORTHO05D005044 1.2e-48 198.0 113 87.6
TPR.G12384 Trifolium pratense HOM05D004293 ORTHO05D005044 2.2e-42 177.2 107 83.2
Lj1g0022848 Lotus japonicus HOM05D004293 ORTHO05D005044 2.8e-42 176.8 113 79.6
Glyma.14G073100 Glycine max HOM05D004293 ORTHO05D005044 4.8e-42 176.0 113 78.8
Glyma.17G251900 Glycine max HOM05D004293 ORTHO05D005044 4.8e-42 176.0 113 78.8
Psat5g016560 Pisum sativum HOM05D004293 ORTHO05D005044 4.8e-42 176.0 113 77.9
Medtr3g112040 Medicago truncatula HOM05D004293 ORTHO05D005044 1.1e-41 174.9 107 81.3
Glyma.04G030600 Glycine max HOM05D004293 ORTHO05D005044 4.1e-41 172.9 113 77.0
VMungo1309G1848 Vigna mungo HOM05D004293 ORTHO05D005044 5.3e-41 172.6 113 77.0
Phvul.001G013100 Phaseolus vulgaris HOM05D004293 ORTHO05D005044 9.0e-41 171.8 109 80.7
arahy.Tifrunner.gnm1.ann1.0FN7J8 Arachis hypogaea HOM05D004293 ORTHO05D005044 2.6e-40 170.2 113 76.1
arahy.Tifrunner.gnm1.ann1.5L5Q4S Arachis hypogaea HOM05D004293 ORTHO05D005044 2.6e-40 170.2 113 76.1
Ca_15502_v3 Cicer arietinum L. HOM05D004293 ORTHO05D005044 3.4e-40 169.9 107 78.5
Lalb_Chr22g0354691 Lupinus albus HOM05D004293 ORTHO05D005044 3.4e-40 169.9 110 80.9
Phvul.009G059500 Phaseolus vulgaris HOM05D004293 ORTHO05D005044 4.5e-40 169.5 113 75.2
Lj5g0013851 Lotus japonicus HOM05D004293 ORTHO05D005044 5.9e-40 169.1 113 76.1
Nitab4.5_0003265g0120 Nicotiana tabacum HOM05D004293 ORTHO05D005044 5.9e-40 169.1 113 75.2
Nitab4.5_0008031g0020 Nicotiana tabacum HOM05D004293 ORTHO05D005044 5.9e-40 169.1 113 75.2
Ca_13360_v3 Cicer arietinum L. HOM05D004293 ORTHO05D005044 7.7e-40 168.7 107 81.3
CAN.G1226.41 Capsicum annuum HOM05D004293 ORTHO05D005044 1.7e-39 167.5 113 75.2
Haze_17937 Corylus avellana HOM05D004293 ORTHO05D005044 2.9e-39 166.8 113 74.3
PGSC0003DMG400003693 Solanum tuberosum HOM05D004293 ORTHO05D005044 5.0e-39 166.0 113 74.3
VMungo0647G0812 Vigna mungo HOM05D004293 ORTHO05D005044 5.0e-39 166.0 112 76.8
Peaxi162Scf00140g00021 Petunia axillaris HOM05D004293 ORTHO05D005044 6.5e-39 165.6 113 73.5
Sopen04g034170 Solanum pennellii HOM05D004293 ORTHO05D005044 8.5e-39 165.2 113 74.3
Cfa018181 Carpinus fangiana HOM05D004293 ORTHO05D005044 1.1e-38 164.9 113 73.5
CiPaw.15G081500 Carya illinoinensis HOM05D004293 ORTHO05D005044 1.4e-38 164.5 113 72.6
Dinv39438 Davidia involucrata HOM05D004293 ORTHO05D005044 1.4e-38 164.5 113 72.6
FAN20G0470 Fragaria x ananassa HOM05D004293 ORTHO05D005044 1.4e-38 164.5 116 71.6
RcHm_v2.0_Chr6g0301341 Rosa chinensis HOM05D004293 ORTHO05D005044 1.4e-38 164.5 116 71.6
Solyc04g080580.3 Solanum lycopersicum HOM05D004293 ORTHO05D005044 2.5e-38 163.7 113 73.5
Manes.18G022600 Manihot esculenta HOM05D004293 ORTHO05D005044 3.2e-38 163.3 111 72.1
Actinidia29816 Actinidia chinensis HOM05D004293 ORTHO05D005044 5.5e-38 162.5 113 70.8
Dinv36104 Davidia involucrata HOM05D004293 ORTHO05D005044 9.4e-38 161.8 113 70.8
TWI36G0587 Tripterygium wilfordii HOM05D004293 ORTHO05D005044 1.2e-37 161.4 113 72.6
Duzib093G2062 Durio zibethinus HOM05D004293 ORTHO05D005044 1.6e-37 161.0 113 70.8
Thecc.08G030000 Theobroma cacao HOM05D004293 ORTHO05D005044 1.6e-37 161.0 113 70.8
unitig_37.g12996 Utricularia gibba HOM05D004293 ORTHO05D005044 2.1e-37 160.6 113 71.7
Eucgr.F01882 Eucalyptus grandis HOM05D004293 ORTHO05D005044 2.7e-37 160.2 113 72.6
FvH4_2g39580 Fragaria vesca HOM05D004293 ORTHO05D005044 2.7e-37 160.2 116 69.8
FAN27G1442 Fragaria x ananassa HOM05D004293 ORTHO05D005044 2.7e-37 160.2 116 69.8
MD15G1024500 Malus domestica HOM05D004293 ORTHO05D005044 2.7e-37 160.2 116 70.7
Oeu002826.1 Olea europaea HOM05D004293 ORTHO05D005044 2.7e-37 160.2 113 71.7
QL02p009229 Quercus lobata HOM05D004293 ORTHO05D005044 2.7e-37 160.2 113 69.0
Duzib041G0612 Durio zibethinus HOM05D004293 ORTHO05D005044 3.6e-37 159.8 113 69.0
PGR031G3321 Punica granatum HOM05D004293 ORTHO05D005044 3.6e-37 159.8 113 71.7
Nn5g29655 Nelumbo nucifera HOM05D004293 ORTHO05D005044 4.6e-37 159.5 113 69.9
Potri.005G229100 Populus trichocarpa HOM05D004293 ORTHO05D005044 4.6e-37 159.5 113 71.7
vmacro04534 Vaccinium macrocarpon HOM05D004293 ORTHO05D005044 6.1e-37 159.1 113 69.9
CiPaw.16G060300 Carya illinoinensis HOM05D004293 ORTHO05D005044 7.9e-37 158.7 113 71.7
Prupe.1G376800 Prunus persica HOM05D004293 ORTHO05D005044 7.9e-37 158.7 116 69.8
COL.COLO4_26281 Corchorus olitorius HOM05D004293 ORTHO05D005044 1.0e-36 158.3 111 70.3
Rhsim07G0240800 Rhododendron simsii HOM05D004293 ORTHO05D005044 1.0e-36 158.3 113 69.9
RhsimUnG0051700 Rhododendron simsii HOM05D004293 ORTHO05D005044 1.0e-36 158.3 113 69.9
Ciclev10001409m.g Citrus clementina HOM05D004293 ORTHO05D005044 1.4e-36 157.9 113 69.0
FAN15G0341 Fragaria x ananassa HOM05D004293 ORTHO05D005044 1.4e-36 157.9 116 69.0
Gohir.D05G260400 Gossypium hirsutum HOM05D004293 ORTHO05D005044 1.8e-36 157.5 113 69.9
Gorai.009G272300 Gossypium raimondii HOM05D004293 ORTHO05D005044 1.8e-36 157.5 113 69.9
SGA_v2.0_scaffold11G05816 Striga asiatica HOM05D004293 ORTHO05D005044 1.8e-36 157.5 115 70.4
Sc15g0003400 Simmondsia chinensis HOM05D004293 ORTHO05D005044 3.0e-36 156.8 113 69.0
TAR376G0140 Trochodendron aralioides HOM05D004293 ORTHO05D005044 3.0e-36 156.8 113 68.1
CANSAT25G3633 Cannabis sativa HOM05D004293 ORTHO05D005044 5.1e-36 156.0 113 69.0
Sabra05G0177000 Salix brachista HOM05D004293 ORTHO05D005044 5.1e-36 156.0 113 69.9
Carub.0001s1914 Capsella rubella HOM05D004293 ORTHO05D005044 6.7e-36 155.6 113 71.7
Dinv40005 Davidia involucrata HOM05D004293 ORTHO05D005044 6.7e-36 155.6 113 64.6
Manes.05G157500 Manihot esculenta HOM05D004293 ORTHO05D005044 8.8e-36 155.2 106 73.6
Sp1g17440 Schrenkiella parvula HOM05D004293 ORTHO05D005044 8.8e-36 155.2 113 69.9
Cpa.g.sc800.2 Carica papaya HOM05D004293 ORTHO05D005044 1.1e-35 154.8 107 73.8
Potri.002G034000 Populus trichocarpa HOM05D004293 ORTHO05D005044 1.1e-35 154.8 113 69.9
Sabra02G0027300 Salix brachista HOM05D004293 ORTHO05D005044 1.1e-35 154.8 113 68.1
THA.LOC104811379 Tarenaya hassleriana HOM05D004293 ORTHO05D005044 1.5e-35 154.5 113 68.1
BcaC05g25831 Brassica carinata HOM05D004293 ORTHO05D005044 2.0e-35 154.1 113 69.9
A06p15760 Brassica napus HOM05D004293 ORTHO05D005044 2.0e-35 154.1 113 69.9
C05p18070 Brassica napus HOM05D004293 ORTHO05D005044 2.0e-35 154.1 113 69.9
BolC5t30515H Brassica oleracea HOM05D004293 ORTHO05D005044 2.0e-35 154.1 113 69.9
BraA06t24685Z Brassica rapa HOM05D004293 ORTHO05D005044 2.0e-35 154.1 113 69.9
CSS0016695 Camellia sinensis var. sinensis HOM05D004293 ORTHO05D005044 2.0e-35 154.1 113 69.0
MELO3C010959.2 Cucumis melo HOM05D004293 ORTHO05D005044 2.0e-35 154.1 113 66.4
MD08G1029000 Malus domestica HOM05D004293 ORTHO05D005044 2.0e-35 154.1 116 67.2
Migut.C00751 Erythranthe guttata HOM05D004293 ORTHO05D005044 2.5e-35 153.7 113 68.1
Gohir.A05G192700 Gossypium hirsutum HOM05D004293 ORTHO05D005044 2.5e-35 153.7 113 66.4
MSTRG.25186 Avicennia marina HOM05D004293 ORTHO05D005044 3.3e-35 153.3 113 67.3
BcaB07g31976 Brassica carinata HOM05D004293 ORTHO05D005044 3.3e-35 153.3 113 69.0
Sed0017600 Sechium edule HOM05D004293 ORTHO05D005044 3.3e-35 153.3 113 68.1
AT1G19600 Arabidopsis thaliana HOM05D004293 ORTHO05D005044 4.3e-35 152.9 107 74.8
AL1G32320 Arabidopsis lyrata HOM05D004293 ORTHO05D005044 5.7e-35 152.5 113 69.9
Gohir.A05G258700 Gossypium hirsutum HOM05D004293 ORTHO05D005044 5.7e-35 152.5 113 68.1
Gohir.D05G195900 Gossypium hirsutum HOM05D004293 ORTHO05D005044 5.7e-35 152.5 113 66.4
TAR628G1187 Trochodendron aralioides HOM05D004293 ORTHO05D005044 5.7e-35 152.5 113 65.5
MSTRG.1266 Avicennia marina HOM05D004293 ORTHO05D005044 7.4e-35 152.1 109 71.6
Thhalv10008038m.g Eutrema salsugineum HOM05D004293 ORTHO05D005044 7.4e-35 152.1 113 69.0
arahy.Tifrunner.gnm1.ann1.CV7JLA Arachis hypogaea HOM05D004293 ORTHO05D005044 1.3e-34 151.4 230 46.1
arahy.Tifrunner.gnm1.ann1.K82YC3 Arachis hypogaea HOM05D004293 ORTHO05D005044 1.3e-34 151.4 229 46.7
CsaV3_2G028890 Cucumis sativus L. HOM05D004293 ORTHO05D005044 1.3e-34 151.4 113 64.6
CARHR020140 Cardamine hirsuta HOM05D004293 ORTHO05D005044 1.7e-34 151.0 111 71.2
Lsat_1_v5_gn_5_27761 Lactuca sativa HOM05D004293 ORTHO05D005044 1.7e-34 151.0 113 67.3
Oeu063615.3 Olea europaea HOM05D004293 ORTHO05D005044 1.7e-34 151.0 107 73.8
Gorai.009G200800 Gossypium raimondii HOM05D004293 ORTHO05D005044 2.8e-34 150.2 113 66.4
MBI10_g06734_MAGBIO Magnolia biondii HOM05D004293 ORTHO05D005044 3.7e-34 149.8 113 65.5
GSVIVG01009736001 Vitis vinifera HOM05D004293 ORTHO05D005044 3.7e-34 149.8 107 69.2
Aa31LG7G4220 Aethionema arabicum HOM05D004293 ORTHO05D005044 4.8e-34 149.4 107 72.9
ECA246G0240 Erigeron canadensis HOM05D004293 ORTHO05D005044 4.8e-34 149.4 113 66.4
Atru.chr13.442 Acer truncatum HOM05D004293 ORTHO05D005044 6.3e-34 149.1 106 68.9
GSVIVG01024614001 Vitis vinifera HOM05D004293 ORTHO05D005044 6.3e-34 149.1 113 62.8
DCAR_013830 Daucus carota HOM05D004293 ORTHO05D005044 1.1e-33 148.3 113 65.5
HanXRQChr05g0151741 Helianthus annuus HOM05D004293 ORTHO05D005044 1.1e-33 148.3 111 66.7
Cc10_g02630 Coffea canephora HOM05D004293 ORTHO05D005044 1.8e-33 147.5 115 68.7
CDE02G3095 Ceratophyllum demersum HOM05D004293 ORTHO05D005044 5.3e-33 146.0 113 65.5
Sed0003816 Sechium edule HOM05D004293 ORTHO05D005044 9.1e-33 145.2 113 63.7
DCAR_025956 Daucus carota HOM05D004293 ORTHO05D005044 1.5e-32 144.4 115 64.3
Aqoxy6G01151 Aquilegia oxysepala HOM05D004293 ORTHO05D005044 3.4e-32 143.3 113 61.9
CSS0029393 Camellia sinensis var. sinensis HOM05D004293 ORTHO05D005044 5.9e-32 142.5 107 67.3
ATR0568G055 Amborella trichopoda HOM05D004293 ORTHO05D005044 7.7e-32 142.1 113 62.8
PSO210G1862 Papaver somniferum HOM05D004293 ORTHO05D005044 1.7e-31 141.0 107 65.4
AUR62007593 Chenopodium quinoa HOM05D000025 ORTHO05D005044 2.9e-31 140.2 109 63.3
AUR62004081 Chenopodium quinoa HOM05D004293 ORTHO05D005044 8.5e-31 138.7 109 62.4
arahy.Tifrunner.gnm1.ann1.GKM7KP Arachis hypogaea HOM05D004293 ORTHO05D005044 1.1e-30 138.3 79 88.6
PSO170G4681 Papaver somniferum HOM05D004293 ORTHO05D005044 1.1e-30 138.3 107 64.5
Os01g0105900 Oryza sativa ssp. japonica HOM05D004293 ORTHO05D005044 4.2e-30 136.3 107 67.3
Hund16444 Selenicereus undatus HOM05D004293 ORTHO05D005044 4.2e-30 136.3 106 63.2
Hund13994 Selenicereus undatus HOM05D004293 ORTHO05D005044 2.1e-29 134.0 109 56.9
EL10Ac6g15533 Beta vulgaris HOM05D004293 ORTHO05D005044 2.7e-29 133.7 109 60.6
Zm00001eb126820 Zea mays HOM05D004293 ORTHO05D005044 1.4e-28 131.3 113 59.3
ClCG08G014870 Citrullus lanatus HOM05D004293 ORTHO05D005044 1.5e-27 127.9 155 45.2
SEGI_26481 Sequoiadendron giganteum HOM05D004293 ORTHO05D005044 3.3e-27 126.7 114 55.3
arahy.Tifrunner.gnm1.ann1.0W95S5 Arachis hypogaea HOM05D004293 ORTHO05D005044 3.1e-25 120.2 70 84.3
Pp3c18_21330 Physcomitrium patens HOM05D004293 ORTHO05D005044 5.3e-25 119.4 114 51.8
Glyma.09G161200 Glycine max HOM05D004293 ORTHO05D005044 9.1e-25 118.6 87 65.5
Atru.chr3.818 Acer truncatum HOM05D004293 ORTHO05D005044 1.6e-24 117.9 120 52.5
Atru.chr3.817 Acer truncatum HOM05D004293 ORTHO05D005044 2.0e-24 117.5 109 55.0
Pp3c21_3850 Physcomitrium patens HOM05D004293 ORTHO05D005044 2.6e-24 117.1 114 50.9
Actinidia38000 Actinidia chinensis HOM05D004293 ORTHO05D005044 7.7e-24 115.5 87 64.4
CDE06G2583 Ceratophyllum demersum HOM05D004293 ORTHO05D005044 3.8e-23 113.2 84 65.5
SMO119G0092 Selaginella moellendorffii HOM05D004293 ORTHO05D005044 3.8e-23 113.2 108 53.7
Mapoly0012s0094 Marchantia polymorpha HOM05D004293 ORTHO05D005044 4.2e-22 109.8 110 53.6
GSVIVG01006581001 Vitis vinifera HOM05D004293 ORTHO05D005044 6.7e-20 102.4 70 67.1
arahy.Tifrunner.gnm1.ann1.PQF71L Arachis hypogaea HOM05D004293 ORTHO05D007850 5.7e-19 99.4 56 89.3
Ah.03g141070 Amaranthus hybridus HOM05D004293 ORTHO05D005044 3.1e-17 93.6 70 64.3
AagrBONN_evm.TU.Sc2ySwM_368.426 Anthoceros agrestis HOM05D004293 ORTHO05D005044 1.2e-16 91.7 113 44.2
BcaB07g31974 Brassica carinata HOM05D004293 ORTHO05D005044 1.2e-16 91.7 113 48.7
GSVIVG01019088001 Vitis vinifera HOM05D000084 ORTHO05D013654 2.7e-16 90.5 63 66.7
arahy.Tifrunner.gnm1.ann1.WY0JR2 Arachis hypogaea HOM05D005693 ORTHO05D015958 4.5e-16 89.7 183 43.2
Peaxi162Scf00552g00045 Petunia axillaris HOM05D004293 ORTHO05D005044 1.1e-14 85.1 88 54.5
MCO11G065 Micromonas commoda HOM05D004293 ORTHO05D005044 1.5e-14 84.7 114 43.9
arahy.Tifrunner.gnm1.ann1.BT3C4B Arachis hypogaea HOM05D000237 ORTHO05D005044 2.5e-14 84.0 199 37.7
arahy.Tifrunner.gnm1.ann1.WKA37H Arachis hypogaea HOM05D004293 ORTHO05D005044 1.6e-13 81.3 210 36.2
GSVIVG01021492001 Vitis vinifera HOM05D000084 ORTHO05D013654 2.1e-13 80.9 56 66.1
arahy.Tifrunner.gnm1.ann1.P0ETKP Arachis hypogaea HOM05D004293 ORTHO05D004688 2.7e-13 80.5 51 72.5
arahy.Tifrunner.gnm1.ann1.4DL9G8 Arachis hypogaea HOM05D004293 ORTHO05D005044 6.1e-13 79.3 40 95.0
arahy.Tifrunner.gnm1.ann1.GXR4QA Arachis hypogaea HOM05D003988 ORTHO05D004688 1.4e-12 78.2 44 79.5
MCO08G314 Micromonas commoda HOM05D004293 ORTHO05D005044 2.0e-11 74.3 102 39.2
MCO09G728 Micromonas commoda HOM05D004293 ORTHO05D005044 4.4e-11 73.2 115 40.9
HPP92_000286 Vanilla planifolia HOM05D004293 ORTHO05D005044 5.7e-11 72.8 113 41.6
arahy.Tifrunner.gnm1.ann1.WTH6WV Arachis hypogaea HOM05D004293 ORTHO05D005044 2.4e-09 67.4 36 88.9
arahy.Tifrunner.gnm1.ann1.H04EJ4 Arachis hypogaea HOM05D001194 ORTHO05D005044 5.4e-09 66.2 31 100.0
arahy.Tifrunner.gnm1.ann1.N6716C Arachis hypogaea HOM05D004293 ORTHO05D085933 9.1e-09 65.5 71 54.9
Cre01.g039850 Chlamydomonas reinhardtii HOM05D005997 ORTHO05D005044 3.5e-08 63.5 133 30.8
arahy.Tifrunner.gnm1.ann1.H5S4YV Arachis hypogaea HOM05D004293 ORTHO05D005044 1.0e-07 62.0 74 52.7
Cre07.g331800 Chlamydomonas reinhardtii HOM05D004293 ORTHO05D005044 2.2e-07 60.8 114 34.2
arahy.Tifrunner.gnm1.ann1.WS32QH Arachis hypogaea HOM05D000637 ORTHO05D082268 5.0e-07 59.7 72 48.6
arahy.Tifrunner.gnm1.ann1.FTMH30 Arachis hypogaea HOM05D001891 ORTHO05D005832 9.5e-06 55.5 40 77.5
BolC9t58686H Brassica oleracea HOM05D004635 ORTHO05D005899 9.5e-06 55.5 37 75.7


User provided reference genes

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