Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.C76MJD Arachis hypogaea HOM05D000819 ORTHO05D000661 6.1e-42 173.7 87 100.0
arahy.Tifrunner.gnm1.ann1.GLQ651 Arachis hypogaea HOM05D000819 ORTHO05D000661 3.0e-36 154.8 79 94.9
Lalb_Chr21g0318921 Lupinus albus HOM05D000819 ORTHO05D000661 1.2e-24 116.3 77 72.7
Psat1g075600 Pisum sativum HOM05D000819 ORTHO05D000661 8.3e-23 110.2 77 71.4
Lj2g0001531 Lotus japonicus HOM05D000819 ORTHO05D000661 1.4e-22 109.4 79 70.9
Medtr6g011530 Medicago truncatula HOM05D000819 ORTHO05D000661 5.4e-22 107.5 77 70.1
TPR.G4283 Trifolium pratense HOM05D000819 ORTHO05D000661 7.8e-21 103.6 77 67.5
Lalb_Chr06g0175451 Lupinus albus HOM05D000819 ORTHO05D000661 1.0e-20 103.2 77 68.8
Lalb_Chr02g0159581 Lupinus albus HOM05D000819 ORTHO05D000661 3.9e-20 101.3 77 67.5
ClCG10G014900 Citrullus lanatus HOM05D000819 ORTHO05D000661 4.3e-19 97.8 79 59.5
MELO3C009886.2 Cucumis melo HOM05D000819 ORTHO05D000661 2.8e-18 95.1 80 58.8
CANSAT64G1572 Cannabis sativa HOM05D000819 ORTHO05D000661 4.7e-18 94.4 79 60.8
Sed0006296 Sechium edule HOM05D000819 ORTHO05D000661 1.8e-17 92.4 79 62.0
Ca_04271_v3 Cicer arietinum L. HOM05D000819 ORTHO05D000661 2.6e-16 88.6 77 63.6
Glyma.13G064300 Glycine max HOM05D000819 ORTHO05D000661 5.8e-16 87.4 77 59.7
Glyma.19G020500 Glycine max HOM05D000819 ORTHO05D000661 5.8e-16 87.4 77 59.7
CsaV3_3G041620 Cucumis sativus L. HOM05D000819 ORTHO05D000661 4.9e-15 84.3 79 50.6
Dinv33732 Davidia involucrata HOM05D000819 ORTHO05D000661 6.4e-15 84.0 79 58.2
GSVIVG01011353001 Vitis vinifera HOM05D000819 ORTHO05D000661 3.2e-14 81.6 81 53.1
Haze_14569 Corylus avellana HOM05D000819 ORTHO05D000661 4.2e-14 81.3 78 57.7
Lj1g0017770 Lotus japonicus HOM05D000819 ORTHO05D000661 7.1e-14 80.5 76 55.3
Actinidia17535 Actinidia chinensis HOM05D000819 ORTHO05D000661 1.2e-13 79.7 77 54.5
Cfa007520 Carpinus fangiana HOM05D000819 ORTHO05D000661 2.1e-13 79.0 79 55.7
TPR.G4274 Trifolium pratense HOM05D000819 ORTHO05D000661 2.1e-13 79.0 76 56.6
VMungo0464G0731 Vigna mungo HOM05D000819 ORTHO05D000661 1.0e-12 76.6 77 50.6
Medtr7g009710 Medicago truncatula HOM05D000819 ORTHO05D000661 1.3e-12 76.3 77 51.9
Dinv06521 Davidia involucrata HOM05D000819 ORTHO05D000661 1.7e-12 75.9 76 55.3
Hma1.2p1_0449F.1_g155180 Hydrangea macrophylla HOM05D000819 ORTHO05D000661 1.7e-12 75.9 79 48.1
Actinidia02704 Actinidia chinensis HOM05D000819 ORTHO05D000661 5.1e-12 74.3 77 51.9
QL02p080838 Quercus lobata HOM05D000819 ORTHO05D000661 1.1e-11 73.2 80 48.8
Manes.17G023000 Manihot esculenta HOM05D000819 ORTHO05D000661 1.5e-11 72.8 92 43.5
Sabra04G0087900 Salix brachista HOM05D000819 ORTHO05D000661 1.5e-11 72.8 88 47.7
Phvul.004G026900 Phaseolus vulgaris HOM05D000819 ORTHO05D000661 1.9e-11 72.4 77 48.1
Psat3g196280 Pisum sativum HOM05D000819 ORTHO05D000661 2.5e-11 72.0 76 47.4
vmacro18207 Vaccinium macrocarpon HOM05D000819 ORTHO05D000661 3.3e-11 71.6 79 46.8
Rhsim08G0066700 Rhododendron simsii HOM05D000819 ORTHO05D000661 4.3e-11 71.2 76 51.3
Sc11g0006950 Simmondsia chinensis HOM05D000819 ORTHO05D000661 4.3e-11 71.2 82 45.1
Cpa.g.sc14.34 Carica papaya HOM05D000819 ORTHO05D000661 1.6e-10 69.3 100 38.0
Duzib187G0832 Durio zibethinus HOM05D000819 ORTHO05D000661 3.6e-10 68.2 99 41.4
Prupe.3G270900 Prunus persica HOM05D000819 ORTHO05D000661 3.6e-10 68.2 80 48.8
THA.LOC104808022 Tarenaya hassleriana HOM05D000819 ORTHO05D000661 3.6e-10 68.2 100 39.0
CiPaw.03G029200 Carya illinoinensis HOM05D000819 ORTHO05D000661 8.1e-10 67.0 81 49.4
Duzib264G0269 Durio zibethinus HOM05D000819 ORTHO05D000661 1.1e-09 66.6 98 40.8
TWI34G1635 Tripterygium wilfordii HOM05D000819 ORTHO05D000661 1.1e-09 66.6 90 37.8
Ciclev10011964m.g Citrus clementina HOM05D000819 ORTHO05D000661 2.4e-09 65.5 92 40.2
MD09G1048100 Malus domestica HOM05D000819 ORTHO05D000661 2.4e-09 65.5 78 51.3
Eucgr.I01926 Eucalyptus grandis HOM05D000819 ORTHO05D000661 4.0e-09 64.7 78 39.7
RcHm_v2.0_Chr2g0169021 Rosa chinensis HOM05D000819 ORTHO05D000661 4.0e-09 64.7 80 46.2
THA.LOC104823929 Tarenaya hassleriana HOM05D000819 ORTHO05D000661 4.0e-09 64.7 95 38.9
Aqoxy3G03292 Aquilegia oxysepala HOM05D000819 ORTHO05D000661 6.9e-09 63.9 73 42.5
MSTRG.3222 Avicennia marina HOM05D000819 ORTHO05D000661 9.0e-09 63.5 77 46.8
FAN09G2768 Fragaria x ananassa HOM05D000819 ORTHO05D000661 1.2e-08 63.2 79 43.0
MBI01_g12900_MAGBIO Magnolia biondii HOM05D000819 ORTHO05D000661 1.2e-08 63.2 83 42.2
Ah.12g065410 Amaranthus hybridus HOM05D000819 ORTHO05D000661 2.0e-08 62.4 79 39.2
PGR142G1254 Punica granatum HOM05D000819 ORTHO05D000661 2.0e-08 62.4 77 40.3
CAN.G206.125 Capsicum annuum HOM05D000819 ORTHO05D000661 2.6e-08 62.0 79 43.0
arahy.Tifrunner.gnm1.ann1.JDLK3J Arachis hypogaea HOM05D000819 ORTHO05D000661 3.4e-08 61.6 82 45.1
arahy.Tifrunner.gnm1.ann1.K2R76V Arachis hypogaea HOM05D000819 ORTHO05D000661 3.4e-08 61.6 82 45.1
CSS0006175 Camellia sinensis var. sinensis HOM05D000819 ORTHO05D000661 3.4e-08 61.6 77 42.9
CSS0043029 Camellia sinensis var. sinensis HOM05D000819 ORTHO05D000661 3.4e-08 61.6 77 42.9
Manes.15G179300 Manihot esculenta HOM05D000819 ORTHO05D000661 4.4e-08 61.2 92 37.0
Thecc.04G076200 Theobroma cacao HOM05D000819 ORTHO05D000661 4.4e-08 61.2 100 38.0
FAN14G4477 Fragaria x ananassa HOM05D000819 ORTHO05D000661 1.3e-07 59.7 79 43.0
TAR622G0842 Trochodendron aralioides HOM05D000819 ORTHO05D000661 1.3e-07 59.7 80 41.2
Gohir.A05G363700 Gossypium hirsutum HOM05D000819 ORTHO05D000661 1.7e-07 59.3 94 38.3
TWI60G0359 Tripterygium wilfordii HOM05D000819 ORTHO05D000661 1.7e-07 59.3 90 36.7
FAN02G0842 Fragaria x ananassa HOM05D000819 ORTHO05D000661 2.2e-07 58.9 79 43.0
FvH4_6g49150 Fragaria vesca HOM05D000819 ORTHO05D000661 2.9e-07 58.5 79 41.8
Nitab4.5_0009739g0050 Nicotiana tabacum HOM05D000819 ORTHO05D000661 3.8e-07 58.2 79 39.2
AUR62031629 Chenopodium quinoa HOM05D000819 ORTHO05D000661 4.9e-07 57.8 79 40.5
Nitab4.5_0000564g0230 Nicotiana tabacum HOM05D000819 ORTHO05D000661 4.9e-07 57.8 79 39.2
ATR1120G010 Amborella trichopoda HOM05D000819 ORTHO05D000661 6.4e-07 57.4 74 43.2
Cc07_g03100 Coffea canephora HOM05D000819 ORTHO05D000661 6.4e-07 57.4 79 40.5
Potri.004G129400 Populus trichocarpa HOM05D000819 ORTHO05D000661 8.4e-07 57.0 90 40.0
TAR374G1014 Trochodendron aralioides HOM05D000819 ORTHO05D000661 8.4e-07 57.0 82 39.0
Peaxi162Scf00129g00430 Petunia axillaris HOM05D000819 ORTHO05D000661 1.1e-06 56.6 80 38.8
FAN05G4462 Fragaria x ananassa HOM05D000819 ORTHO05D000661 1.4e-06 56.2 80 40.0
Glyma.18G256400 Glycine max HOM05D000819 ORTHO05D000661 1.9e-06 55.8 83 38.6
PGSC0003DMG400001313 Solanum tuberosum HOM05D000819 ORTHO05D000661 1.9e-06 55.8 79 36.7
BcaB06g27389 Brassica carinata HOM05D000819 ORTHO05D000661 2.4e-06 55.5 92 35.9
TWI32G0641 Tripterygium wilfordii HOM05D000819 ORTHO05D000661 2.4e-06 55.5 91 34.1
TWI32G1302 Tripterygium wilfordii HOM05D000819 ORTHO05D000661 2.4e-06 55.5 91 34.1
Gohir.D04G051000 Gossypium hirsutum HOM05D000819 ORTHO05D000661 3.2e-06 55.1 94 36.2
Gorai.012G056600 Gossypium raimondii HOM05D000819 ORTHO05D000661 3.2e-06 55.1 94 36.2
AUR62038864 Chenopodium quinoa HOM05D000819 ORTHO05D000661 4.2e-06 54.7 79 39.2
Solyc02g087740.3 Solanum lycopersicum HOM05D000819 ORTHO05D000661 4.2e-06 54.7 79 36.7
Sopen11g010330 Solanum pennellii HOM05D000819 ORTHO05D000661 4.2e-06 54.7 79 36.7
Zm00001eb297330 Zea mays HOM05D000819 ORTHO05D000661 5.4e-06 54.3 57 47.4
Atru.chr8.2688 Acer truncatum HOM05D000819 ORTHO05D000661 7.1e-06 53.9 91 36.3
Thhalv10027872m.g Eutrema salsugineum HOM05D000819 ORTHO05D000661 7.1e-06 53.9 95 33.7
MSTRG.23956 Avicennia marina HOM05D000819 ORTHO05D000661 9.3e-06 53.5 52 48.1
A04p12640 Brassica napus HOM05D000819 ORTHO05D000661 9.3e-06 53.5 88 35.2
BraA04t16921Z Brassica rapa HOM05D000819 ORTHO05D000661 9.3e-06 53.5 88 35.2
CAN.G685.4 Capsicum annuum HOM05D000819 ORTHO05D000661 9.3e-06 53.5 82 35.4
DCAR_006721 Daucus carota HOM05D000819 ORTHO05D000661 9.3e-06 53.5 77 36.4


User provided reference genes

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