Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.C7681Z Arachis hypogaea HOM05D006672 ORTHO05D007769 9.9e-71 270.0 136 100.0
arahy.Tifrunner.gnm1.ann1.QF27IC Arachis hypogaea HOM05D006672 ORTHO05D007769 3.5e-60 235.0 133 91.0
arahy.Tifrunner.gnm1.ann1.HW7XL7 Arachis hypogaea HOM05D006672 ORTHO05D007769 4.3e-58 228.0 130 89.2
arahy.Tifrunner.gnm1.ann1.ZTP7X5 Arachis hypogaea HOM05D006672 ORTHO05D007769 4.2e-53 211.5 124 85.5
arahy.Tifrunner.gnm1.ann1.N61AC9 Arachis hypogaea HOM05D006672 ORTHO05D007769 1.0e-51 206.8 132 82.6
arahy.Tifrunner.gnm1.ann1.MVJ1PZ Arachis hypogaea HOM05D006672 ORTHO05D007769 2.5e-50 202.2 123 83.7
arahy.Tifrunner.gnm1.ann1.07RGV5 Arachis hypogaea HOM05D006672 ORTHO05D007769 2.0e-47 192.6 130 79.2
arahy.Tifrunner.gnm1.ann1.XTGM9Z Arachis hypogaea HOM05D006672 ORTHO05D007769 2.6e-47 192.2 119 85.7
arahy.Tifrunner.gnm1.ann1.DAY3RM Arachis hypogaea HOM05D006672 ORTHO05D007769 1.7e-46 189.5 133 75.2
arahy.Tifrunner.gnm1.ann1.HQ5KA8 Arachis hypogaea HOM05D006672 ORTHO05D007769 1.9e-37 159.5 97 80.4
arahy.Tifrunner.gnm1.ann1.K72DJ3 Arachis hypogaea HOM05D006672 ORTHO05D007769 1.6e-36 156.4 96 81.2
Glyma.08G205200 Glycine max HOM05D006672 ORTHO05D007769 5.3e-32 141.4 133 60.2
Phvul.010G149100 Phaseolus vulgaris HOM05D006672 ORTHO05D007769 3.0e-27 125.6 135 57.8
CiPaw.02G149600 Carya illinoinensis HOM05D006672 ORTHO05D007769 2.5e-26 122.5 135 54.1
VMungo0331G0342 Vigna mungo HOM05D006672 ORTHO05D007769 3.3e-26 122.1 113 59.3
Cfa009362 Carpinus fangiana HOM05D006672 ORTHO05D007769 5.3e-24 114.8 136 50.0
Lalb_Chr25g0279941 Lupinus albus HOM05D006672 ORTHO05D007769 2.0e-23 112.8 124 57.3
Lj3g0012066 Lotus japonicus HOM05D006672 ORTHO05D007769 2.9e-22 109.0 133 55.6
Haze_12408 Corylus avellana HOM05D006672 ORTHO05D007769 5.0e-22 108.2 128 51.6
TWI75G0771 Tripterygium wilfordii HOM05D006672 ORTHO05D007769 5.0e-22 108.2 131 49.6
FvH4_6g31600 Fragaria vesca HOM05D006672 ORTHO05D007769 6.5e-22 107.8 128 54.7
Potri.003G053500 Populus trichocarpa HOM05D006672 ORTHO05D007769 8.5e-22 107.5 149 49.7
Cc04_g03140 Coffea canephora HOM05D006672 ORTHO05D007769 1.9e-21 106.3 129 51.9
Ca_20375_v3 Cicer arietinum L. HOM05D006672 ORTHO05D007769 3.2e-21 105.5 96 61.5
RcHm_v2.0_Chr2g0138661 Rosa chinensis HOM05D006672 ORTHO05D007769 7.2e-21 104.4 133 53.4
FAN09G1670 Fragaria x ananassa HOM05D006672 ORTHO05D007769 1.2e-20 103.6 128 53.9
Manes.04G128475 Manihot esculenta HOM05D006672 ORTHO05D007769 1.2e-20 103.6 135 48.9
AUR62011637 Chenopodium quinoa HOM05D006672 ORTHO05D007769 1.6e-20 103.2 136 48.5
TWI12G1441 Tripterygium wilfordii HOM05D006672 ORTHO05D007769 2.1e-20 102.8 126 50.8
TPR.G17666 Trifolium pratense HOM05D006672 ORTHO05D007769 4.6e-20 101.7 116 56.9
Sabra03G0029900 Salix brachista HOM05D006672 ORTHO05D007769 7.9e-20 100.9 137 48.2
FAN14G5379 Fragaria x ananassa HOM05D006672 ORTHO05D007769 1.4e-19 100.1 126 52.4
Lsat_1_v5_gn_5_130661 Lactuca sativa HOM05D006672 ORTHO05D007769 1.8e-19 99.8 133 48.9
DCAR_026329 Daucus carota HOM05D006672 ORTHO05D007769 2.3e-19 99.4 116 50.0
Atru.chr1.3318 Acer truncatum HOM05D006672 ORTHO05D007769 3.0e-19 99.0 130 48.5
Lsat_1_v5_gn_5_130760 Lactuca sativa HOM05D006672 ORTHO05D007769 3.0e-19 99.0 129 47.3
Nitab4.5_0008314g0010 Nicotiana tabacum HOM05D006672 ORTHO05D007769 3.0e-19 99.0 130 51.5
MD17G1192500 Malus domestica HOM05D006672 ORTHO05D007769 6.7e-19 97.8 114 53.5
Ah.01g021520 Amaranthus hybridus HOM05D006672 ORTHO05D007769 1.1e-18 97.1 139 44.6
Dinv30493 Davidia involucrata HOM05D006672 ORTHO05D007769 1.5e-18 96.7 136 46.3
Psat7g250280 Pisum sativum HOM05D006672 ORTHO05D007769 1.5e-18 96.7 93 61.3
FAN05G5736 Fragaria x ananassa HOM05D006672 ORTHO05D007769 1.9e-18 96.3 128 50.0
DCAR_022631 Daucus carota HOM05D006672 ORTHO05D007769 2.5e-18 95.9 123 48.0
Medtr0206s0010 Medicago truncatula HOM05D006672 ORTHO05D007769 3.3e-18 95.5 106 56.6
AUR62016468 Chenopodium quinoa HOM05D006672 ORTHO05D007769 4.3e-18 95.1 134 47.8
Prupe.3G068600 Prunus persica HOM05D006672 ORTHO05D007769 4.3e-18 95.1 114 54.4
HanXRQChr10g0313401 Helianthus annuus HOM05D006672 ORTHO05D007769 1.7e-17 93.2 133 46.6
QL05p022164 Quercus lobata HOM05D006672 ORTHO05D007769 1.7e-17 93.2 119 53.8
EL10Ac9g22019 Beta vulgaris HOM05D000202 ORTHO05D000117 2.8e-17 92.4 125 46.4
Ciclev10026595m.g Citrus clementina HOM05D006672 ORTHO05D007769 2.8e-17 92.4 108 51.9
Lsat_1_v5_gn_2_34400 Lactuca sativa HOM05D008424 ORTHO05D007769 2.8e-17 92.4 133 47.4
Nitab4.5_0001315g0240 Nicotiana tabacum HOM05D006672 ORTHO05D007769 8.2e-17 90.9 130 49.2
Gohir.D05G130600 Gossypium hirsutum HOM05D006672 ORTHO05D007769 1.4e-16 90.1 136 44.9
Gorai.009G134300 Gossypium raimondii HOM05D006672 ORTHO05D007769 1.4e-16 90.1 136 44.9
Rhsim12G0199700 Rhododendron simsii HOM05D006672 ORTHO05D007769 1.4e-16 90.1 108 54.6
THA.LOC104800426 Tarenaya hassleriana HOM05D006672 ORTHO05D007769 2.4e-16 89.4 127 43.3
Actinidia24746 Actinidia chinensis HOM05D006672 ORTHO05D007769 3.1e-16 89.0 137 48.2
ECA234G2073 Erigeron canadensis HOM05D006672 ORTHO05D007769 3.1e-16 89.0 134 47.0
MBI04_g22016_MAGBIO Magnolia biondii HOM05D006672 ORTHO05D007769 6.9e-16 87.8 149 43.0
Sp1g13550 Schrenkiella parvula HOM05D006672 ORTHO05D007769 6.9e-16 87.8 130 47.7
Medtr4g012950 Medicago truncatula HOM05D006672 ORTHO05D007769 9.1e-16 87.4 106 53.8
BcaC05g25452 Brassica carinata HOM05D006672 ORTHO05D007769 2.6e-15 85.9 125 48.0
C05p13360 Brassica napus HOM05D006672 ORTHO05D007769 2.6e-15 85.9 125 48.0
BolC5t30073H Brassica oleracea HOM05D006672 ORTHO05D007769 3.4e-15 85.5 127 47.2
CANSAT56G0062 Cannabis sativa HOM05D006672 ORTHO05D007769 4.5e-15 85.1 121 47.1
Gohir.A05G131200 Gossypium hirsutum HOM05D006672 ORTHO05D007769 5.9e-15 84.7 136 43.4
Sopen03g039560 Solanum pennellii HOM05D006672 ORTHO05D007769 5.9e-15 84.7 124 45.2
PGSC0003DMG400040414 Solanum tuberosum HOM05D006672 ORTHO05D007769 5.9e-15 84.7 126 46.8
TAR636G2852 Trochodendron aralioides HOM05D006672 ORTHO05D007769 5.9e-15 84.7 137 42.3
A06p11230 Brassica napus HOM05D006672 ORTHO05D007769 7.7e-15 84.3 123 48.0
BcaC05g25464 Brassica carinata HOM05D006672 ORTHO05D007769 1.0e-14 84.0 114 47.4
BraA06t24303Z Brassica rapa HOM05D006672 ORTHO05D007769 1.7e-14 83.2 123 47.2
COL.COLO4_30405 Corchorus olitorius HOM05D006672 ORTHO05D007769 1.7e-14 83.2 129 43.4
Hma1.2p1_2022F.1_g311340 Hydrangea macrophylla HOM05D006672 ORTHO05D007769 1.7e-14 83.2 117 46.2
Oeu040367.1 Olea europaea HOM05D006672 ORTHO05D007769 1.7e-14 83.2 116 47.4
BcaC05g25462 Brassica carinata HOM05D006672 ORTHO05D007769 2.2e-14 82.8 73 58.9
AL1G27320 Arabidopsis lyrata HOM05D006672 ORTHO05D007769 2.9e-14 82.4 129 43.4
Migut.D01021 Erythranthe guttata HOM05D006672 ORTHO05D007769 2.9e-14 82.4 137 46.0
MSTRG.22671 Avicennia marina HOM05D006672 ORTHO05D007769 5.0e-14 81.6 132 43.9
SalBow1G8254 Salvia bowleyana HOM05D000380 ORTHO05D000561 5.0e-14 81.6 131 43.5
Actinidia08988 Actinidia chinensis HOM05D000726 ORTHO05D007769 6.5e-14 81.3 124 46.0
Carub.0001s1499 Capsella rubella HOM05D006672 ORTHO05D007769 6.5e-14 81.3 125 45.6
Solyc03g120740.1 Solanum lycopersicum HOM05D006672 ORTHO05D007769 6.5e-14 81.3 124 45.2
Thecc.06G091100 Theobroma cacao HOM05D006672 ORTHO05D007769 8.5e-14 80.9 141 41.1
Thhalv10008936m.g Eutrema salsugineum HOM05D006672 ORTHO05D007769 1.1e-13 80.5 143 42.7
AT1G15230 Arabidopsis thaliana HOM05D006672 ORTHO05D007769 1.4e-13 80.1 128 43.0
ClCG07G013120 Citrullus lanatus HOM05D006672 ORTHO05D007769 1.9e-13 79.7 138 39.1
SGA_v2.0_scaffold4G02004 Striga asiatica HOM05D006672 ORTHO05D007769 1.9e-13 79.7 130 46.9
Sc15g0001280 Simmondsia chinensis HOM05D006672 ORTHO05D007769 3.2e-13 79.0 128 39.1
Duzib160G0370 Durio zibethinus HOM05D000726 ORTHO05D007769 4.2e-13 78.6 140 40.0
Duzib235G0275 Durio zibethinus HOM05D006672 ORTHO05D007769 4.2e-13 78.6 63 65.1
MELO3C012968.2 Cucumis melo HOM05D006672 ORTHO05D007769 9.4e-13 77.4 129 44.2
CARHR015760 Cardamine hirsuta HOM05D006672 ORTHO05D007769 2.1e-12 76.3 126 45.2
Peaxi162Scf00015g00013 Petunia axillaris HOM05D006672 ORTHO05D007769 2.7e-12 75.9 98 49.0
Aa31LG7G40 Aethionema arabicum HOM05D006672 ORTHO05D007769 4.7e-12 75.1 135 43.0
unitig_899.g14774 Utricularia gibba HOM05D006672 ORTHO05D007769 1.0e-11 73.9 129 43.4
BcaB03g13070 Brassica carinata HOM05D005761 ORTHO05D007286 1.4e-11 73.6 145 40.0
CSS0000508 Camellia sinensis var. sinensis HOM05D006672 ORTHO05D007769 3.9e-11 72.0 132 43.2
CSS0037944 Camellia sinensis var. sinensis HOM05D006672 ORTHO05D007769 3.9e-11 72.0 133 42.1
Sed0005168 Sechium edule HOM05D006672 ORTHO05D007769 3.9e-11 72.0 115 41.7
Lsat_1_v5_gn_5_130640 Lactuca sativa HOM05D006672 ORTHO05D007769 1.1e-10 70.5 67 56.7
PSO782G0352 Papaver somniferum HOM05D006672 ORTHO05D007769 5.7e-10 68.2 137 38.0
vmacro16964 Vaccinium macrocarpon HOM05D006672 ORTHO05D007769 1.3e-09 67.0 145 40.0
CsaV3_3G025030 Cucumis sativus L. HOM05D006672 ORTHO05D007769 2.2e-09 66.2 140 38.6
Aqoxy7G01641 Aquilegia oxysepala HOM05D006672 ORTHO05D007769 2.8e-09 65.9 93 43.0
SEGI_22972 Sequoiadendron giganteum HOM05D006672 ORTHO05D007769 8.2e-09 64.3 126 42.9
PSO832G0654 Papaver somniferum HOM05D006672 ORTHO05D007769 4.1e-08 62.0 128 37.5
Sc12g0009390 Simmondsia chinensis HOM05D006672 ORTHO05D007769 1.2e-07 60.5 83 49.4
Nn8g39154 Nelumbo nucifera HOM05D006672 ORTHO05D007769 1.5e-07 60.1 116 39.7
PGR102G0682 Punica granatum HOM05D006672 ORTHO05D007769 1.5e-07 60.1 118 37.3
Rhsim06G0080600 Rhododendron simsii HOM05D006672 ORTHO05D007769 1.5e-07 60.1 68 48.5
SMO364G0119 Selaginella moellendorffii HOM05D006672 ORTHO05D007769 2.0e-07 59.7 138 39.1
HPP92_005483 Vanilla planifolia HOM05D006672 ORTHO05D007769 2.6e-07 59.3 62 56.5
Zm00001eb098380 Zea mays HOM05D006672 ORTHO05D007769 1.7e-06 56.6 112 42.0
SGA_v2.0_scaffold5G02564 Striga asiatica HOM05D000085 ORTHO05D000274 5.0e-06 55.1 123 37.4


User provided reference genes

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