Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.C6FW5S Arachis hypogaea HOM05D006917 ORTHO05D008297 2.9e-120 435.3 223 100.0
arahy.Tifrunner.gnm1.ann1.43ZBCD Arachis hypogaea HOM05D006917 ORTHO05D008297 3.1e-98 362.1 264 73.9
arahy.Tifrunner.gnm1.ann1.RY5XZD Arachis hypogaea HOM05D006917 ORTHO05D008297 7.7e-97 357.5 264 73.1
VMungo1127G0570 Vigna mungo HOM05D006917 ORTHO05D008297 2.2e-67 259.6 258 57.8
Phvul.011G111800 Phaseolus vulgaris HOM05D006917 ORTHO05D008297 2.0e-65 253.1 258 55.4
Glyma.12G107100 Glycine max HOM05D006917 ORTHO05D008297 2.3e-64 249.6 270 55.6
Lalb_Chr03g0029201 Lupinus albus HOM05D006917 ORTHO05D008297 4.7e-62 241.9 247 55.5
Glyma.06G298100 Glycine max HOM05D006917 ORTHO05D008297 4.0e-61 238.8 270 53.7
Lalb_Chr19g0135451 Lupinus albus HOM05D006917 ORTHO05D008297 6.8e-61 238.0 271 51.3
Psat7g195960 Pisum sativum HOM05D006917 ORTHO05D008297 1.2e-60 237.3 272 53.7
Lj3g0010136 Lotus japonicus HOM05D006917 ORTHO05D008297 2.0e-60 236.5 163 71.8
Ca_20697_v3 Cicer arietinum L. HOM05D006917 ORTHO05D008297 6.4e-59 231.5 266 52.6
TPR.G21667 Trifolium pratense HOM05D006917 ORTHO05D008297 4.6e-57 225.3 163 68.1
Medtr4g046023 Medicago truncatula HOM05D006917 ORTHO05D008297 2.3e-56 223.0 162 69.1
TWI36G0541 Tripterygium wilfordii HOM05D006917 ORTHO05D008297 1.1e-53 214.2 160 65.6
Atru.chr6.3069 Acer truncatum HOM05D006917 ORTHO05D008297 3.4e-52 209.1 162 65.4
Potri.013G146900 Populus trichocarpa HOM05D006917 ORTHO05D008297 2.2e-51 206.5 162 64.2
Cpa.g.sc53.106 Carica papaya HOM05D006917 ORTHO05D008297 3.7e-51 205.7 160 64.4
Cfa014546 Carpinus fangiana HOM05D006917 ORTHO05D008297 1.9e-50 203.4 162 64.2
Gohir.A13G056900 Gossypium hirsutum HOM05D006917 ORTHO05D008297 1.9e-50 203.4 162 63.0
Gorai.013G073800 Gossypium raimondii HOM05D006917 ORTHO05D008297 2.4e-50 203.0 162 63.0
COL.COLO4_13687 Corchorus olitorius HOM05D006917 ORTHO05D008297 4.1e-50 202.2 162 63.6
Duzib132G0607 Durio zibethinus HOM05D006917 ORTHO05D008297 5.4e-50 201.8 162 62.3
Eucgr.D00334 Eucalyptus grandis HOM05D006917 ORTHO05D008297 5.4e-50 201.8 162 62.3
Gohir.D13G065000 Gossypium hirsutum HOM05D006917 ORTHO05D008297 9.2e-50 201.1 162 61.7
GSVIVG01030015001 Vitis vinifera HOM05D006917 ORTHO05D008297 2.7e-49 199.5 162 60.5
Prupe.3G231600 Prunus persica HOM05D006917 ORTHO05D008297 6.0e-49 198.4 162 60.5
Manes.13G151300 Manihot esculenta HOM05D006917 ORTHO05D008297 7.8e-49 198.0 162 61.7
Haze_13090 Corylus avellana HOM05D006917 ORTHO05D008297 1.3e-48 197.2 162 62.3
A03p57910 Brassica napus HOM05D006917 ORTHO05D008297 2.3e-48 196.4 162 59.3
BraA03t14855Z Brassica rapa HOM05D006917 ORTHO05D008297 2.3e-48 196.4 162 59.3
CANSAT64G1157 Cannabis sativa HOM05D006917 ORTHO05D008297 5.1e-48 195.3 162 59.9
Thecc.02G172300 Theobroma cacao HOM05D006917 ORTHO05D008297 8.6e-48 194.5 162 61.7
Dinv15489 Davidia involucrata HOM05D006917 ORTHO05D008297 1.5e-47 193.7 162 59.9
MD09G1093800 Malus domestica HOM05D006917 ORTHO05D008297 1.5e-47 193.7 162 58.0
QL08p037351 Quercus lobata HOM05D006917 ORTHO05D008297 1.9e-47 193.4 162 61.1
PGR042G0968 Punica granatum HOM05D006917 ORTHO05D008297 2.5e-47 193.0 160 58.8
AL7G24390 Arabidopsis lyrata HOM05D006917 ORTHO05D008297 7.3e-47 191.4 162 58.6
C07p56030 Brassica napus HOM05D006917 ORTHO05D008297 7.3e-47 191.4 162 58.0
BolC7t46080H Brassica oleracea HOM05D006917 ORTHO05D008297 7.3e-47 191.4 162 58.0
Carub.0007s1255 Capsella rubella HOM05D006917 ORTHO05D008297 7.3e-47 191.4 162 58.0
Cc05_g06310 Coffea canephora HOM05D006917 ORTHO05D008297 7.3e-47 191.4 162 59.3
AT4G28210 Arabidopsis thaliana HOM05D006917 ORTHO05D008297 2.1e-46 189.9 162 58.0
Sabra13G0118400 Salix brachista HOM05D006917 ORTHO05D008297 2.8e-46 189.5 162 59.9
CARHR235920 Cardamine hirsuta HOM05D006917 ORTHO05D008297 6.2e-46 188.3 162 57.4
Sopen10g004420 Solanum pennellii HOM05D006917 ORTHO05D008297 6.2e-46 188.3 162 59.9
CiPaw.03G170000 Carya illinoinensis HOM05D006917 ORTHO05D008297 8.1e-46 188.0 162 59.3
CSS0047204 Camellia sinensis var. sinensis HOM05D006917 ORTHO05D008297 1.4e-45 187.2 162 59.9
Hma1.2p1_0565F.1_g179500 Hydrangea macrophylla HOM05D006917 ORTHO05D008297 1.4e-45 187.2 162 56.8
Thhalv10025608m.g Eutrema salsugineum HOM05D006917 ORTHO05D008297 1.8e-45 186.8 162 56.8
Solyc10g008600.3 Solanum lycopersicum HOM05D006917 ORTHO05D008297 2.3e-45 186.4 162 59.3
CSS0012077 Camellia sinensis var. sinensis HOM05D006917 ORTHO05D008297 3.1e-45 186.0 162 59.3
Nn1g03886 Nelumbo nucifera HOM05D006917 ORTHO05D008297 3.1e-45 186.0 162 58.6
Sp7g26170 Schrenkiella parvula HOM05D006917 ORTHO05D008297 3.1e-45 186.0 162 57.4
Lj8P117T42 Lonicera japonica HOM05D006917 ORTHO05D008297 4.0e-45 185.7 162 56.8
Ciclev10015637m.g Citrus clementina HOM05D006917 ORTHO05D008297 8.9e-45 184.5 162 57.4
RcHm_v2.0_Chr2g0161911 Rosa chinensis HOM05D006917 ORTHO05D008297 1.2e-44 184.1 162 58.0
Aa31LG2G22070 Aethionema arabicum HOM05D006917 ORTHO05D008297 1.5e-44 183.7 162 57.4
BcaNung01588 Brassica carinata HOM05D006917 ORTHO05D008297 1.5e-44 183.7 162 54.3
C01p24650 Brassica napus HOM05D006917 ORTHO05D008297 1.5e-44 183.7 162 54.9
Migut.M00331 Erythranthe guttata HOM05D006917 ORTHO05D008297 1.5e-44 183.7 163 54.6
THA.LOC104807893 Tarenaya hassleriana HOM05D006917 ORTHO05D008297 2.0e-44 183.3 162 57.4
THA.LOC104825523 Tarenaya hassleriana HOM05D006917 ORTHO05D008297 2.0e-44 183.3 162 58.0
Peaxi162Scf00608g00317 Petunia axillaris HOM05D006917 ORTHO05D008297 2.6e-44 183.0 162 59.9
PGSC0003DMG401021671 Solanum tuberosum HOM05D006917 ORTHO05D008297 2.6e-44 183.0 162 57.4
Nitab4.5_0003195g0010 Nicotiana tabacum HOM05D006917 ORTHO05D008297 3.4e-44 182.6 162 58.0
DCAR_009726 Daucus carota HOM05D006917 ORTHO05D008297 4.4e-44 182.2 162 56.2
ClCG01G000980 Citrullus lanatus HOM05D006917 ORTHO05D008297 7.6e-44 181.4 162 55.6
Sed0009072 Sechium edule HOM05D006917 ORTHO05D008297 7.6e-44 181.4 162 57.4
FAN14G5902 Fragaria x ananassa HOM05D006917 ORTHO05D008297 1.3e-43 180.6 160 56.9
FvH4_6g44760 Fragaria vesca HOM05D006917 ORTHO05D008297 1.7e-43 180.3 160 56.9
FAN05G2664 Fragaria x ananassa HOM05D006917 ORTHO05D008297 2.2e-43 179.9 160 56.9
A01p19630 Brassica napus HOM05D006917 ORTHO05D008297 4.9e-43 178.7 162 54.9
SalBow7G0082 Salvia bowleyana HOM05D006917 ORTHO05D008297 6.4e-43 178.3 170 51.2
FAN02G4118 Fragaria x ananassa HOM05D006917 ORTHO05D008297 8.4e-43 177.9 160 55.6
FAN09G3443 Fragaria x ananassa HOM05D006917 ORTHO05D008297 8.4e-43 177.9 160 56.2
ECA246G1823 Erigeron canadensis HOM05D006917 ORTHO05D008297 1.4e-42 177.2 161 54.7
TAR629G2913 Trochodendron aralioides HOM05D006917 ORTHO05D008297 1.4e-42 177.2 162 54.9
AUR62044684 Chenopodium quinoa HOM05D006917 ORTHO05D008297 2.4e-42 176.4 162 53.1
PGSC0003DMG400029584 Solanum tuberosum HOM05D006917 ORTHO05D008297 3.2e-42 176.0 162 54.3
MBI19_g29221_MAGBIO Magnolia biondii HOM05D006917 ORTHO05D008297 5.4e-42 175.3 163 56.4
BraA01t01896Z Brassica rapa HOM05D006917 ORTHO05D008297 1.2e-41 174.1 162 53.7
Lsat_1_v5_gn_3_39800 Lactuca sativa HOM05D006917 ORTHO05D008297 1.2e-41 174.1 162 53.7
SGA_v2.0_scaffold70G23465 Striga asiatica HOM05D006917 ORTHO05D008297 1.6e-41 173.7 162 54.3
BolC1t02415H Brassica oleracea HOM05D006917 ORTHO05D008297 2.1e-41 173.3 157 52.9
Nitab4.5_0000635g0150 Nicotiana tabacum HOM05D006917 ORTHO05D008297 7.8e-41 171.4 152 58.6
Actinidia30487 Actinidia chinensis HOM05D006917 ORTHO05D008297 1.0e-40 171.0 166 53.6
CsaV3_5G001130 Cucumis sativus L. HOM05D006917 ORTHO05D008297 1.0e-40 171.0 162 53.7
MELO3C005833.2 Cucumis melo HOM05D006917 ORTHO05D008297 2.3e-40 169.9 162 52.5
HanXRQChr06g0170991 Helianthus annuus HOM05D006917 ORTHO05D008297 3.9e-40 169.1 162 54.3
EL10Ac9g22343 Beta vulgaris HOM05D006917 ORTHO05D008297 5.1e-40 168.7 162 52.5
AUR62037382 Chenopodium quinoa HOM05D006917 ORTHO05D008297 1.5e-39 167.2 162 52.5
PSO210G6334 Papaver somniferum HOM05D006917 ORTHO05D008297 2.5e-39 166.4 162 54.3
PSO832G2257 Papaver somniferum HOM05D006917 ORTHO05D008297 2.5e-39 166.4 162 54.9
unitig_746.g26713 Utricularia gibba HOM05D006917 ORTHO05D008297 3.3e-39 166.0 163 54.0
Sc21g0002460 Simmondsia chinensis HOM05D006917 ORTHO05D008297 4.3e-39 165.6 162 47.5
Hund08056 Selenicereus undatus HOM05D006917 ORTHO05D008297 9.6e-39 164.5 163 50.9
BcaC09g50505 Brassica carinata HOM05D006917 ORTHO05D008297 1.2e-38 164.1 149 53.0
MSTRG.18638 Avicennia marina HOM05D006917 ORTHO05D008297 1.1e-37 161.0 163 50.9
BcaC06g32638 Brassica carinata HOM05D006917 ORTHO05D008297 1.8e-37 160.2 162 53.7
Ah.04g154320 Amaranthus hybridus HOM05D006917 ORTHO05D008297 3.1e-37 159.5 162 50.0
Aqoxy3G03605 Aquilegia oxysepala HOM05D006917 ORTHO05D008297 4.0e-37 159.1 162 48.8
HPP92_002192 Vanilla planifolia HOM05D006917 ORTHO05D008297 2.2e-35 153.3 163 48.5
ATR0693G234 Amborella trichopoda HOM05D006917 ORTHO05D008297 2.7e-33 146.4 164 47.6
CDE12G0159 Ceratophyllum demersum HOM05D006917 ORTHO05D008297 1.6e-30 137.1 163 42.9
arahy.Tifrunner.gnm1.ann1.29DNDL Arachis hypogaea HOM05D006917 ORTHO05D008297 2.1e-25 120.2 66 89.4
MD17G1083500 Malus domestica HOM05D006917 ORTHO05D008297 3.3e-23 112.8 101 56.4
SEGI_37556 Sequoiadendron giganteum HOM05D006917 ORTHO05D008297 2.9e-11 73.2 168 33.9
SEGI_04255 Sequoiadendron giganteum HOM05D006917 ORTHO05D008297 4.9e-11 72.4 169 33.1


User provided reference genes

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