Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.C4SSGW Arachis hypogaea HOM05D000071 ORTHO05D038918 2.0e-33 145.2 74 100.0
Prupe.2G166300 Prunus persica HOM05D000071 ORTHO05D000029 3.7e-11 71.2 61 55.7
Cfa016333 Carpinus fangiana HOM05D000071 ORTHO05D000029 1.1e-10 69.7 53 62.3
Prupe.2G172300 Prunus persica HOM05D000071 ORTHO05D000029 2.4e-10 68.6 52 59.6
Dinv34740 Davidia involucrata HOM05D000071 ORTHO05D000029 4.0e-10 67.8 58 56.9
Glyma.16G175000 Glycine max HOM05D000071 ORTHO05D000029 4.0e-10 67.8 57 52.6
Gohir.A11G293941 Gossypium hirsutum HOM05D000071 ORTHO05D000029 2.6e-09 65.1 50 58.0
Cfa016335 Carpinus fangiana HOM05D000071 ORTHO05D000029 4.5e-09 64.3 51 58.8
Cfa000855 Carpinus fangiana HOM05D000071 ORTHO05D000029 1.3e-08 62.8 53 58.5
Sabra15G0019100 Salix brachista HOM05D000071 ORTHO05D000029 1.3e-08 62.8 56 57.1
TPR.G24557 Trifolium pratense HOM05D000071 ORTHO05D000029 1.3e-08 62.8 58 53.4
Prupe.2G168700 Prunus persica HOM05D000071 ORTHO05D000029 1.7e-08 62.4 53 52.8
arahy.Tifrunner.gnm1.ann1.DZKS62 Arachis hypogaea HOM05D000071 ORTHO05D000029 2.9e-08 61.6 58 46.6
Haze_21507 Corylus avellana HOM05D000071 ORTHO05D000029 2.9e-08 61.6 52 51.9
Gohir.A09G181250 Gossypium hirsutum HOM05D000071 ORTHO05D000029 2.9e-08 61.6 68 48.5
Peaxi162Scf00983g00033 Petunia axillaris HOM05D000071 ORTHO05D000029 2.9e-08 61.6 55 52.7
Haze_00084 Corylus avellana HOM05D000071 ORTHO05D000029 3.8e-08 61.2 54 53.7
Oeu056468.1 Olea europaea HOM05D000071 ORTHO05D000029 3.8e-08 61.2 57 56.1
CSS0022360 Camellia sinensis var. sinensis HOM05D000071 ORTHO05D000029 4.9e-08 60.8 50 50.0
CSS0041362 Camellia sinensis var. sinensis HOM05D000071 ORTHO05D000029 8.4e-08 60.1 50 54.0
Medtr0087s0070 Medicago truncatula HOM05D000071 ORTHO05D000029 1.1e-07 59.7 59 49.2
CANSAT11G2454 Cannabis sativa HOM05D000071 ORTHO05D000029 1.9e-07 58.9 62 46.8
Gohir.A07G088901 Gossypium hirsutum HOM05D000071 ORTHO05D000029 1.9e-07 58.9 42 59.5
Os01g0603800 Oryza sativa ssp. japonica HOM05D000071 ORTHO05D000029 1.9e-07 58.9 63 38.1
Cfa019643 Carpinus fangiana HOM05D000071 ORTHO05D000029 2.5e-07 58.5 54 50.0
Ciclev10010471m.g Citrus clementina HOM05D000071 ORTHO05D000029 3.2e-07 58.2 63 44.4
Haze_21508 Corylus avellana HOM05D000071 ORTHO05D000029 3.2e-07 58.2 54 50.0
Glyma.16G187200 Glycine max HOM05D000071 ORTHO05D000029 3.2e-07 58.2 55 52.7
Ciclev10010405m.g Citrus clementina HOM05D000071 ORTHO05D000029 5.5e-07 57.4 62 45.2
Gorai.007G335800 Gossypium raimondii HOM05D000071 ORTHO05D000029 5.5e-07 57.4 53 47.2
Peaxi162Scf00989g00001 Petunia axillaris HOM05D000071 ORTHO05D038918 7.1e-07 57.0 53 47.2
Dinv07779 Davidia involucrata HOM05D000071 ORTHO05D000029 9.3e-07 56.6 55 45.5
Duzib106G0548 Durio zibethinus HOM05D000071 ORTHO05D000029 1.2e-06 56.2 51 47.1
Rhsim02G0186000 Rhododendron simsii HOM05D000071 ORTHO05D000029 1.2e-06 56.2 66 40.9
Prupe.4G265000 Prunus persica HOM05D000071 ORTHO05D000029 1.6e-06 55.8 49 49.0
ATR0827G180 Amborella trichopoda HOM05D010684 ORTHO05D012438 2.1e-06 55.5 53 47.2
COL.COLO4_09595 Corchorus olitorius HOM05D000071 ORTHO05D000029 2.1e-06 55.5 56 46.4
Prupe.1G067000 Prunus persica HOM05D000071 ORTHO05D000029 2.1e-06 55.5 46 54.3
AUR62021180 Chenopodium quinoa HOM05D000071 ORTHO05D000029 2.7e-06 55.1 54 48.1
Gorai.007G280700 Gossypium raimondii HOM05D000071 ORTHO05D000029 3.5e-06 54.7 54 48.1
Rhsim03G0183200 Rhododendron simsii HOM05D000071 ORTHO05D000029 3.5e-06 54.7 63 46.0
Ah.07g207120 Amaranthus hybridus HOM05D000071 ORTHO05D000029 4.6e-06 54.3 60 40.0
Gorai.007G338300 Gossypium raimondii HOM05D000071 ORTHO05D000029 4.6e-06 54.3 48 50.0
RcHm_v2.0_Chr7g0206911 Rosa chinensis HOM05D000071 ORTHO05D000029 4.6e-06 54.3 46 56.5
FvH4_7g26564 Fragaria vesca HOM05D000071 ORTHO05D000029 6.0e-06 53.9 58 43.1
CSS0040636 Camellia sinensis var. sinensis HOM05D000071 ORTHO05D000029 7.9e-06 53.5 51 43.1
ClCG04G000560 Citrullus lanatus HOM05D000029 ORTHO05D008567 7.9e-06 53.5 56 44.6
Zm00001eb261230 Zea mays HOM05D000071 ORTHO05D000029 7.9e-06 53.5 55 41.8


User provided reference genes

Program Settings