Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.C4PR70 Arachis hypogaea HOM05D007631 ORTHO05D009566 3.4e-155 551.6 272 100.0
Glyma.11G102300 Glycine max HOM05D007631 ORTHO05D009566 4.8e-85 318.5 275 64.0
Lj3g0001232 Lotus japonicus HOM05D007631 ORTHO05D009566 2.7e-83 312.8 277 61.4
Lalb_Chr03g0024841 Lupinus albus HOM05D007631 ORTHO05D009566 3.2e-81 305.8 273 61.5
VMungo1127G1566 Vigna mungo HOM05D007631 ORTHO05D009566 3.6e-80 302.4 275 61.5
Medtr4g074590 Medicago truncatula HOM05D007631 ORTHO05D009566 1.1e-73 280.8 277 57.8
TPR.G32328 Trifolium pratense HOM05D007631 ORTHO05D009566 6.8e-71 271.6 280 56.1
Ca_03026_v3 Cicer arietinum L. HOM05D007631 ORTHO05D009566 1.2e-70 270.8 279 55.9
Psat7g173560 Pisum sativum HOM05D007631 ORTHO05D009566 8.9e-63 244.6 273 52.4
Phvul.011G031300 Phaseolus vulgaris HOM05D007631 ORTHO05D009566 6.4e-61 238.4 277 52.3
arahy.Tifrunner.gnm1.ann1.GZ47R7 Arachis hypogaea HOM05D007631 ORTHO05D009566 1.8e-60 236.9 119 99.2
FAN12G2650 Fragaria x ananassa HOM05D007631 ORTHO05D009566 3.3e-57 226.1 270 49.6
Ciclev10032529m.g Citrus clementina HOM05D007631 ORTHO05D009566 2.8e-56 223.0 272 47.8
Manes.04G066700 Manihot esculenta HOM05D007631 ORTHO05D009566 3.1e-55 219.5 274 50.4
CiPaw.09G164100 Carya illinoinensis HOM05D007631 ORTHO05D009566 5.2e-55 218.8 274 49.6
Gohir.A03G110300 Gossypium hirsutum HOM05D007631 ORTHO05D009566 2.6e-54 216.5 273 49.1
FAN07G2143 Fragaria x ananassa HOM05D007631 ORTHO05D009566 4.4e-54 215.7 280 47.5
Duzib268G1119 Durio zibethinus HOM05D007631 ORTHO05D009566 5.8e-54 215.3 279 48.4
Potri.005G094700 Populus trichocarpa HOM05D007631 ORTHO05D009566 2.2e-53 213.4 271 49.8
TWI53G1419 Tripterygium wilfordii HOM05D007631 ORTHO05D009566 3.7e-53 212.6 272 49.3
ClCG10G011860 Citrullus lanatus HOM05D007631 ORTHO05D009566 1.2e-51 207.6 216 52.8
Gohir.D02G134900 Gossypium hirsutum HOM05D007631 ORTHO05D009566 1.6e-51 207.2 273 46.9
Nn4g24939 Nelumbo nucifera HOM05D007631 ORTHO05D009566 7.8e-51 204.9 270 46.7
CANSAT64G0359 Cannabis sativa HOM05D007631 ORTHO05D009566 1.0e-50 204.5 219 50.7
MELO3C024033.2 Cucumis melo HOM05D007631 ORTHO05D009566 1.7e-50 203.8 224 51.3
CsaV3_3G031500 Cucumis sativus L. HOM05D007631 ORTHO05D009566 1.5e-49 200.7 231 50.2
CsaV3_3G032520 Cucumis sativus L. HOM05D007631 ORTHO05D009566 1.5e-49 200.7 274 46.0
Eucgr.J00853 Eucalyptus grandis HOM05D007631 ORTHO05D009566 1.5e-49 200.7 211 51.7
Sp3g17810 Schrenkiella parvula HOM05D007631 ORTHO05D009566 4.0e-47 192.6 274 44.5
FAN17G2236 Fragaria x ananassa HOM05D007631 ORTHO05D009566 4.4e-46 189.1 233 45.5
Aa31LG8G6570 Aethionema arabicum HOM05D007631 ORTHO05D009566 1.7e-45 187.2 229 47.6
PGR119G1778 Punica granatum HOM05D007631 ORTHO05D009566 2.9e-45 186.4 219 47.0
Thhalv10021444m.g Eutrema salsugineum HOM05D007631 ORTHO05D009566 4.9e-45 185.7 250 43.6
AT3G19800 Arabidopsis thaliana HOM05D007631 ORTHO05D009566 6.4e-45 185.3 265 44.2
Lsat_1_v5_gn_3_33601 Lactuca sativa HOM05D007631 ORTHO05D009566 6.4e-45 185.3 243 44.0
A01p34940 Brassica napus HOM05D007631 ORTHO05D009566 1.1e-44 184.5 209 48.8
BraA01t03577Z Brassica rapa HOM05D007631 ORTHO05D009566 1.1e-44 184.5 209 48.8
AUR62015208 Chenopodium quinoa HOM05D007631 ORTHO05D009566 1.4e-44 184.1 269 42.4
ECA246G0740 Erigeron canadensis HOM05D007631 ORTHO05D009566 1.9e-44 183.7 228 46.1
MD16G1250700 Malus domestica HOM05D007631 ORTHO05D009566 7.1e-44 181.8 229 45.4
AL3G33250 Arabidopsis lyrata HOM05D007631 ORTHO05D009566 1.6e-43 180.6 248 44.0
C01p44350 Brassica napus HOM05D007631 ORTHO05D009566 2.1e-43 180.3 208 48.1
BolC1t04400H Brassica oleracea HOM05D007631 ORTHO05D009566 2.1e-43 180.3 208 48.1
Cc11_g05090 Coffea canephora HOM05D007631 ORTHO05D009566 6.0e-43 178.7 244 48.0
HanXRQChr17g0540801 Helianthus annuus HOM05D007631 ORTHO05D009566 1.0e-42 177.9 230 43.9
Hma1.2p1_0499F.1_g166830 Hydrangea macrophylla HOM05D007631 ORTHO05D009566 1.0e-42 177.9 275 43.3
CAN.G157.15 Capsicum annuum HOM05D007631 ORTHO05D009566 1.7e-42 177.2 228 46.9
Carub.0003s1968 Capsella rubella HOM05D007631 ORTHO05D009566 3.0e-42 176.4 266 43.2
EL10Ac9g22926 Beta vulgaris HOM05D007631 ORTHO05D009566 5.1e-42 175.6 243 43.6
Sopen02g009160 Solanum pennellii HOM05D007631 ORTHO05D009566 8.6e-42 174.9 231 43.3
Thecc.02G311600 Theobroma cacao HOM05D007631 ORTHO05D009566 1.5e-41 174.1 178 55.1
Nitab4.5_0002392g0040 Nicotiana tabacum HOM05D007631 ORTHO05D009566 2.5e-41 173.3 232 46.1
GSVIVG01010153001 Vitis vinifera HOM05D007631 ORTHO05D009566 2.5e-41 173.3 268 43.3
Solyc02g055440.4 Solanum lycopersicum HOM05D007631 ORTHO05D009566 3.3e-41 172.9 231 43.3
CARHR095310 Cardamine hirsuta HOM05D007631 ORTHO05D009566 2.1e-40 170.2 265 42.3
SalBow6G3201 Salvia bowleyana HOM05D007631 ORTHO05D009566 4.7e-40 169.1 253 41.5
PSO478G5292 Papaver somniferum HOM05D007631 ORTHO05D009566 1.8e-39 167.2 244 43.4
Dinv17601 Davidia involucrata HOM05D007631 ORTHO05D009566 5.2e-39 165.6 269 41.3
FvH4_4g07430 Fragaria vesca HOM05D007631 ORTHO05D009566 5.2e-39 165.6 177 52.0
COL.COLO4_27670 Corchorus olitorius HOM05D007631 ORTHO05D009566 8.9e-39 164.9 274 41.6
PGSC0003DMG400029978 Solanum tuberosum HOM05D007631 ORTHO05D009566 1.2e-38 164.5 219 44.3
RcHm_v2.0_Chr4g0399891 Rosa chinensis HOM05D007631 ORTHO05D009566 3.4e-38 162.9 177 50.8
Gorai.005G150800 Gossypium raimondii HOM05D007631 ORTHO05D009566 4.9e-37 159.1 179 50.8
HPP92_025628 Vanilla planifolia HOM05D007631 ORTHO05D009566 3.2e-36 156.4 272 38.2
Cpa.g.sc63.2 Carica papaya HOM05D007631 ORTHO05D009566 9.2e-36 154.8 121 59.5
QL03p043760 Quercus lobata HOM05D007631 ORTHO05D009566 3.5e-35 152.9 116 61.2
Hund24286 Selenicereus undatus HOM05D007631 ORTHO05D009566 1.7e-34 150.6 177 46.9
PSO017G5087 Papaver somniferum HOM05D007631 ORTHO05D009566 2.3e-34 150.2 216 41.7
Prupe.1G077300 Prunus persica HOM05D007631 ORTHO05D009566 3.0e-34 149.8 134 56.0
Atru.chr11.1322 Acer truncatum HOM05D007631 ORTHO05D009566 3.3e-33 146.4 112 60.7
Sc10g0006760 Simmondsia chinensis HOM05D007631 ORTHO05D009566 1.6e-32 144.1 216 40.3
Haze_20362 Corylus avellana HOM05D007631 ORTHO05D009566 4.7e-32 142.5 297 36.7
unitig_699.g19551 Utricularia gibba HOM05D007631 ORTHO05D009566 1.1e-31 141.4 249 36.9
vmacro10901 Vaccinium macrocarpon HOM05D007631 ORTHO05D009566 3.1e-31 139.8 297 34.7
Os04g0525000 Oryza sativa ssp. japonica HOM05D007631 ORTHO05D009566 4.0e-31 139.4 218 39.9
Sed0008358 Sechium edule HOM05D007631 ORTHO05D009566 1.5e-30 137.5 228 42.1
Oeu033537.1 Olea europaea HOM05D007631 ORTHO05D009566 9.9e-30 134.8 179 44.1
arahy.Tifrunner.gnm1.ann1.1HI7LS Arachis hypogaea HOM05D037061 ORTHO05D009566 8.4e-29 131.7 119 62.2
CDE05G3190 Ceratophyllum demersum HOM05D005588 ORTHO05D006615 9.3e-28 128.3 186 43.0
Zm00001eb076870 Zea mays HOM05D007631 ORTHO05D009566 2.1e-27 127.1 283 33.6
DCAR_030399 Daucus carota HOM05D007631 ORTHO05D009566 6.0e-27 125.6 298 33.2
ATR0618G124 Amborella trichopoda HOM05D007631 ORTHO05D009566 1.0e-26 124.8 157 43.9
FAN22G0357 Fragaria x ananassa HOM05D007631 ORTHO05D009566 6.6e-26 122.1 151 47.7
Atru.BG.289.p Acer truncatum HOM05D007631 ORTHO05D009566 7.3e-25 118.6 92 58.7
MBI06_g36505_MAGBIO Magnolia biondii HOM05D007631 ORTHO05D009566 4.8e-24 115.9 177 40.7
Aqoxy7G02010 Aquilegia oxysepala HOM05D007631 ORTHO05D009566 1.5e-22 110.9 167 41.9
SGA_v2.0_scaffold88G27232 Striga asiatica HOM05D007631 ORTHO05D009566 1.5e-22 110.9 155 40.6
TAR622G1133 Trochodendron aralioides HOM05D007631 ORTHO05D009566 3.8e-21 106.3 89 57.3
Cfa019889 Carpinus fangiana HOM05D007631 ORTHO05D009566 9.3e-20 101.7 78 57.7
Migut.E00703 Erythranthe guttata HOM05D007631 ORTHO05D009566 5.1e-18 95.9 110 47.3
Migut.E00614 Erythranthe guttata HOM05D007631 ORTHO05D009566 6.7e-18 95.5 110 47.3
arahy.Tifrunner.gnm1.ann1.3PEX26 Arachis hypogaea HOM05D037061 ORTHO05D009566 5.3e-15 85.9 46 89.1
Peaxi162Scf00363g00724 Petunia axillaris HOM05D007631 ORTHO05D009566 4.9e-13 79.3 122 41.0
arahy.Tifrunner.gnm1.ann1.M2YCYK Arachis hypogaea HOM05D007631 ORTHO05D009566 1.9e-12 77.4 113 45.1
Pp3c1_30620 Physcomitrium patens HOM05D007631 ORTHO05D009566 1.1e-09 68.2 218 28.4
Nitab4.5_0000139g0130 Nicotiana tabacum HOM05D007631 ORTHO05D009566 1.9e-09 67.4 81 51.9
SGA_v2.0_scaffold88G27234 Striga asiatica HOM05D007631 ORTHO05D009566 6.2e-08 62.4 77 48.1
CSS0013150 Camellia sinensis var. sinensis HOM05D007631 ORTHO05D009566 2.4e-07 60.5 57 57.9


User provided reference genes

Program Settings