Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.C4511I Arachis hypogaea HOM05D051984 ORTHO05D005694 1.1e-68 264.6 345 100.0
arahy.Tifrunner.gnm1.ann1.ZG4E8S Arachis hypogaea HOM05D051984 ORTHO05D005694 1.6e-64 250.8 348 88.8
Glyma.07G068200 Glycine max HOM05D006343 ORTHO05D005694 2.2e-13 80.9 97 52.6
Lalb_Chr17g0339411 Lupinus albus HOM05D006343 ORTHO05D005694 1.4e-12 78.2 98 53.1
Glyma.16G034200 Glycine max HOM05D006343 ORTHO05D005694 3.1e-12 77.0 102 50.0
Atru.chr5.528 Acer truncatum HOM05D006343 ORTHO05D005694 1.2e-11 75.1 112 47.3
VMungo0331G0061 Vigna mungo HOM05D006343 ORTHO05D005694 6.5e-10 69.3 112 44.6
Cfa003895 Carpinus fangiana HOM05D006343 ORTHO05D005694 3.2e-09 67.0 111 41.4
Haze_15537 Corylus avellana HOM05D006343 ORTHO05D005694 5.5e-09 66.2 122 38.5
CiPaw.01G064000 Carya illinoinensis HOM05D006343 ORTHO05D005694 9.3e-09 65.5 110 42.7
Lj3g0021957 Lotus japonicus HOM05D006343 ORTHO05D005694 1.2e-08 65.1 134 40.3
Phvul.010G101000 Phaseolus vulgaris HOM05D006343 ORTHO05D005694 1.2e-08 65.1 110 44.5
Ciclev10021525m.g Citrus clementina HOM05D006343 ORTHO05D005694 2.7e-08 63.9 116 43.1
Gorai.007G101600 Gossypium raimondii HOM05D006343 ORTHO05D005694 2.7e-08 63.9 114 40.4
Manes.05G031900 Manihot esculenta HOM05D006343 ORTHO05D005694 7.9e-08 62.4 100 42.0
Thecc.01G356100 Theobroma cacao HOM05D006343 ORTHO05D005694 1.0e-07 62.0 114 37.7
MD01G1067400 Malus domestica HOM05D006343 ORTHO05D005694 2.3e-07 60.8 107 36.4
Potri.014G087500 Populus trichocarpa HOM05D006343 ORTHO05D005694 3.9e-07 60.1 104 43.3
COL.COLO4_12739 Corchorus olitorius HOM05D006343 ORTHO05D005694 8.8e-07 58.9 121 38.0
Potri.002G161700 Populus trichocarpa HOM05D006343 ORTHO05D005694 1.1e-06 58.5 113 37.2
Rhsim01G0164000 Rhododendron simsii HOM05D006343 ORTHO05D005694 1.1e-06 58.5 109 42.2
Manes.01G254700 Manihot esculenta HOM05D006343 ORTHO05D005694 1.5e-06 58.2 101 41.6
Prupe.2G173800 Prunus persica HOM05D006343 ORTHO05D005694 1.5e-06 58.2 113 43.4
Sabra14G0063500 Salix brachista HOM05D006343 ORTHO05D005694 1.9e-06 57.8 119 39.5
Duzib133G0920 Durio zibethinus HOM05D006343 ORTHO05D005694 3.3e-06 57.0 114 36.0
TPR.G17916 Trifolium pratense HOM05D006343 ORTHO05D005694 3.3e-06 57.0 63 60.3
MELO3C021196.2 Cucumis melo HOM05D006343 ORTHO05D005694 4.3e-06 56.6 95 41.1
Rhsim01G0164400 Rhododendron simsii HOM05D006343 ORTHO05D005694 4.3e-06 56.6 104 40.4
Rhsim06G0236200 Rhododendron simsii HOM05D006343 ORTHO05D005694 4.3e-06 56.6 104 40.4
Duzib138G0695 Durio zibethinus HOM05D006343 ORTHO05D005694 5.7e-06 56.2 123 36.6
QL04p054168 Quercus lobata HOM05D006343 ORTHO05D005694 5.7e-06 56.2 112 38.4
CsaV3_6G000720 Cucumis sativus L. HOM05D006343 ORTHO05D005694 7.4e-06 55.8 99 40.4
Medtr8g028845 Medicago truncatula HOM05D006343 ORTHO05D005694 7.4e-06 55.8 109 45.9


User provided reference genes

Program Settings