Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.C3UJQ4 Arachis hypogaea HOM05D005581 ORTHO05D006792 5.0e-38 160.6 80 100.0
arahy.Tifrunner.gnm1.ann1.2M0NJC Arachis hypogaea HOM05D005581 ORTHO05D006792 5.1e-19 97.4 70 71.4
arahy.Tifrunner.gnm1.ann1.E9CGF1 Arachis hypogaea HOM05D005581 ORTHO05D006792 5.1e-19 97.4 70 71.4
Oeu031508.1 Olea europaea HOM05D005581 ORTHO05D006792 8.5e-14 80.1 65 64.6
GSVIVG01032543001 Vitis vinifera HOM05D005581 ORTHO05D006792 1.5e-13 79.3 71 57.7
TPR.G39154 Trifolium pratense HOM05D005581 ORTHO05D006792 1.9e-13 79.0 71 59.2
Cfa007475 Carpinus fangiana HOM05D005581 ORTHO05D006792 2.5e-13 78.6 71 59.2
Lj2g0006948 Lotus japonicus HOM05D005581 ORTHO05D006792 2.5e-13 78.6 70 58.6
VMungo1215G0614 Vigna mungo HOM05D005581 ORTHO05D006792 2.5e-13 78.6 71 57.7
Medtr7g030020 Medicago truncatula HOM05D005581 ORTHO05D006792 3.2e-13 78.2 71 59.2
Medtr7g038730 Medicago truncatula HOM05D005581 ORTHO05D006792 3.2e-13 78.2 71 59.2
TAR629G0716 Trochodendron aralioides HOM05D005581 ORTHO05D006792 4.2e-13 77.8 71 57.7
ATR0624G029 Amborella trichopoda HOM05D005581 ORTHO05D006792 5.5e-13 77.4 71 57.7
Phvul.003G125600 Phaseolus vulgaris HOM05D005581 ORTHO05D006792 5.5e-13 77.4 71 57.7
Nn3g17019 Nelumbo nucifera HOM05D005581 ORTHO05D006792 9.4e-13 76.6 70 57.1
Glyma.13G116200 Glycine max HOM05D005581 ORTHO05D006792 1.2e-12 76.3 71 56.3
CSS0034562 Camellia sinensis var. sinensis HOM05D005581 ORTHO05D006792 1.6e-12 75.9 71 56.3
CSS0041908 Camellia sinensis var. sinensis HOM05D005581 ORTHO05D006792 1.6e-12 75.9 71 56.3
Lj2g0014392 Lotus japonicus HOM05D005581 ORTHO05D006792 1.6e-12 75.9 70 55.7
CiPaw.04G022300 Carya illinoinensis HOM05D005581 ORTHO05D006792 2.1e-12 75.5 65 60.0
Lalb_Chr05g0228941 Lupinus albus HOM05D005581 ORTHO05D006792 2.7e-12 75.1 71 56.3
Glyma.17G043600 Glycine max HOM05D005581 ORTHO05D006792 6.1e-12 73.9 71 54.9
QL02p078462 Quercus lobata HOM05D005581 ORTHO05D006792 8.0e-12 73.6 69 55.1
Lj7A408G12 Lonicera japonica HOM05D005581 ORTHO05D006792 3.0e-11 71.6 71 50.7
Prupe.3G278300 Prunus persica HOM05D005581 ORTHO05D006792 3.0e-11 71.6 71 52.1
CDE06G0044 Ceratophyllum demersum HOM05D005581 ORTHO05D006792 4.0e-11 71.2 70 51.4
Atru.chr8.2410 Acer truncatum HOM05D005581 ORTHO05D006792 5.2e-11 70.9 71 52.1
MD17G1040700 Malus domestica HOM05D005581 ORTHO05D006792 6.7e-11 70.5 102 45.1
PGR083G1021 Punica granatum HOM05D005581 ORTHO05D006792 6.7e-11 70.5 71 49.3
arahy.Tifrunner.gnm1.ann1.B679M5 Arachis hypogaea HOM05D005581 ORTHO05D006792 8.8e-11 70.1 68 57.4
arahy.Tifrunner.gnm1.ann1.UYM2HQ Arachis hypogaea HOM05D005581 ORTHO05D006792 8.8e-11 70.1 68 57.4
Actinidia36059 Actinidia chinensis HOM05D005581 ORTHO05D006792 1.1e-10 69.7 71 50.7
Sc06g0002610 Simmondsia chinensis HOM05D005581 ORTHO05D006792 1.1e-10 69.7 69 52.2
TWI12G0286 Tripterygium wilfordii HOM05D005581 ORTHO05D006792 1.1e-10 69.7 63 55.6
EL10Ac7g18001 Beta vulgaris HOM05D005581 ORTHO05D006792 1.5e-10 69.3 71 53.5
CsaV3_5G037490 Cucumis sativus L. HOM05D005581 ORTHO05D006792 1.5e-10 69.3 68 50.0
Eucgr.J02171 Eucalyptus grandis HOM05D005581 ORTHO05D006792 1.5e-10 69.3 71 50.7
Gohir.A07G217500 Gossypium hirsutum HOM05D005581 ORTHO05D006792 1.5e-10 69.3 77 50.6
MBI15_g35865_MAGBIO Magnolia biondii HOM05D005581 ORTHO05D006792 1.5e-10 69.3 71 52.1
Oeu062376.1 Olea europaea HOM05D005581 ORTHO05D006792 1.5e-10 69.3 65 56.9
Ciclev10016724m.g Citrus clementina HOM05D005581 ORTHO05D006792 2.0e-10 68.9 71 52.1
Psat3g165640 Pisum sativum HOM05D005581 ORTHO05D006792 2.0e-10 68.9 71 53.5
MELO3C033644.2 Cucumis melo HOM05D005581 ORTHO05D006792 2.6e-10 68.6 68 50.0
Manes.15G178800 Manihot esculenta HOM05D005581 ORTHO05D006792 2.6e-10 68.6 69 50.7
Sed0016453 Sechium edule HOM05D005581 ORTHO05D006792 2.6e-10 68.6 68 50.0
AUR62022121 Chenopodium quinoa HOM05D005581 ORTHO05D006792 3.3e-10 68.2 71 50.7
PSO063G2781 Papaver somniferum HOM05D005581 ORTHO05D006792 3.3e-10 68.2 71 50.7
PSO591G0467 Papaver somniferum HOM05D005581 ORTHO05D006792 3.3e-10 68.2 71 50.7
PSO832G0275 Papaver somniferum HOM05D005581 ORTHO05D006792 3.3e-10 68.2 71 50.7
Actinidia06044 Actinidia chinensis HOM05D005581 ORTHO05D006792 4.4e-10 67.8 71 49.3
Duzib147G0516 Durio zibethinus HOM05D005581 ORTHO05D006792 4.4e-10 67.8 77 49.4
Gohir.D07G224600 Gossypium hirsutum HOM05D005581 ORTHO05D006792 4.4e-10 67.8 77 49.4
Gorai.001G259000 Gossypium raimondii HOM05D005581 ORTHO05D006792 4.4e-10 67.8 77 49.4
Dinv33676 Davidia involucrata HOM05D005581 ORTHO05D006792 5.7e-10 67.4 59 54.2
Hma1.2p1_1975F.1_g309690 Hydrangea macrophylla HOM05D005581 ORTHO05D006792 5.7e-10 67.4 71 49.3
SHI25585 Sapria himalayana HOM05D005581 ORTHO05D006792 5.7e-10 67.4 70 50.0
COL.COLO4_06153 Corchorus olitorius HOM05D000793 ORTHO05D000783 7.5e-10 67.0 71 50.7
Aqoxy3G03110 Aquilegia oxysepala HOM05D005581 ORTHO05D006792 9.7e-10 66.6 71 49.3
AUR62001208 Chenopodium quinoa HOM05D005581 ORTHO05D006792 9.7e-10 66.6 71 49.3
Hund12510 Selenicereus undatus HOM05D005581 ORTHO05D006792 9.7e-10 66.6 71 50.7
Hund20033 Selenicereus undatus HOM05D005581 ORTHO05D006792 9.7e-10 66.6 68 52.9
MSTRG.23979 Avicennia marina HOM05D005581 ORTHO05D006792 1.7e-09 65.9 69 49.3
ClCG00G001710 Citrullus lanatus HOM05D005581 ORTHO05D006792 2.2e-09 65.5 68 47.1
ClCG09G018630 Citrullus lanatus HOM05D005581 ORTHO05D006792 2.2e-09 65.5 68 47.1
Migut.H00163 Erythranthe guttata HOM05D005581 ORTHO05D006792 2.2e-09 65.5 71 47.9
Potri.001G470300 Populus trichocarpa HOM05D005581 ORTHO05D006792 2.8e-09 65.1 62 51.6
SGA_v2.0_scaffold135G34832 Striga asiatica HOM05D005581 ORTHO05D006792 3.7e-09 64.7 70 41.4
RcHm_v2.0_Chr2g0170291 Rosa chinensis HOM05D005581 ORTHO05D006792 4.8e-09 64.3 71 47.9
Duzib187G0556 Durio zibethinus HOM05D005581 ORTHO05D006792 6.3e-09 63.9 71 47.9
Sabra16G0319200 Salix brachista HOM05D005581 ORTHO05D006792 6.3e-09 63.9 62 51.6
TWI12G0742 Tripterygium wilfordii HOM05D005581 ORTHO05D006792 6.3e-09 63.9 61 52.5
DCAR_011192 Daucus carota HOM05D005581 ORTHO05D006792 8.2e-09 63.5 69 49.3
CARHR102620 Cardamine hirsuta HOM05D005581 ORTHO05D006792 1.1e-08 63.2 65 50.8
Ciclev10012718m.g Citrus clementina HOM05D005581 ORTHO05D006792 1.1e-08 63.2 71 49.3
Atru.BG.224.p Acer truncatum HOM05D005581 ORTHO05D006792 1.4e-08 62.8 68 50.0
AT2G04690 Arabidopsis thaliana HOM05D005581 ORTHO05D006792 1.8e-08 62.4 65 52.3
Cpa.g.sc14.80 Carica papaya HOM05D005581 ORTHO05D006792 1.8e-08 62.4 71 50.7
Ca_19611_v3 Cicer arietinum L. HOM05D005581 ORTHO05D006792 2.4e-08 62.0 68 51.5
SEGI_16176 Sequoiadendron giganteum HOM05D005581 ORTHO05D006792 2.4e-08 62.0 54 57.4
EL10Ac7g18000 Beta vulgaris HOM05D005581 ORTHO05D006792 3.1e-08 61.6 71 47.9
DCAR_003657 Daucus carota HOM05D005581 ORTHO05D006792 3.1e-08 61.6 69 46.4
Nitab4.5_0007185g0080 Nicotiana tabacum HOM05D005581 ORTHO05D006792 3.1e-08 61.6 103 38.8
Thecc.04G002800 Theobroma cacao HOM05D005581 ORTHO05D006792 3.1e-08 61.6 58 51.7
vmacro05787 Vaccinium macrocarpon HOM05D005581 ORTHO05D006792 3.1e-08 61.6 71 45.1
AL3G42310 Arabidopsis lyrata HOM05D005581 ORTHO05D006792 4.1e-08 61.2 65 50.8
Nitab4.5_0004905g0030 Nicotiana tabacum HOM05D000793 ORTHO05D006792 4.1e-08 61.2 103 38.8
Peaxi162Scf00129g00828 Petunia axillaris HOM05D000793 ORTHO05D000783 4.1e-08 61.2 62 46.8
Lalb_Chr21g0319231 Lupinus albus HOM05D005581 ORTHO05D006792 5.3e-08 60.8 65 52.3
HPP92_026859 Vanilla planifolia HOM05D005581 ORTHO05D006792 5.3e-08 60.8 67 49.3
AagrBONN_evm.TU.Sc2ySwM_368.1768 Anthoceros agrestis HOM05D005581 ORTHO05D006792 7.0e-08 60.5 66 48.5
FvH4_6g50030 Fragaria vesca HOM05D005581 ORTHO05D006792 7.0e-08 60.5 57 52.6
FAN05G2284 Fragaria x ananassa HOM05D005581 ORTHO05D006792 7.0e-08 60.5 57 52.6
FAN09G0871 Fragaria x ananassa HOM05D005581 ORTHO05D006792 7.0e-08 60.5 57 52.6
FAN14G0942 Fragaria x ananassa HOM05D005581 ORTHO05D006792 7.0e-08 60.5 57 52.6
Aqoxy3G03108 Aquilegia oxysepala HOM05D005581 ORTHO05D006792 9.1e-08 60.1 70 45.7
Solyc02g087250.4 Solanum lycopersicum HOM05D000793 ORTHO05D000783 9.1e-08 60.1 71 43.7
Sopen02g032000 Solanum pennellii HOM05D005581 ORTHO05D006792 9.1e-08 60.1 71 43.7
PGSC0003DMG400001392 Solanum tuberosum HOM05D005581 ORTHO05D006792 9.1e-08 60.1 71 43.7
Zm00001eb279970 Zea mays HOM05D005581 ORTHO05D006792 9.1e-08 60.1 68 48.5
Hma1.2p1_0375F.1_g139010 Hydrangea macrophylla HOM05D005581 ORTHO05D006792 1.2e-07 59.7 59 50.8
HPP92_018422 Vanilla planifolia HOM05D005581 ORTHO05D006792 1.2e-07 59.7 61 52.5
RhsimUnG0168100 Rhododendron simsii HOM05D005581 ORTHO05D006792 1.6e-07 59.3 68 47.1
Carub.0003s2629 Capsella rubella HOM05D005581 ORTHO05D006792 2.0e-07 58.9 100 38.0
ECA240G2828 Erigeron canadensis HOM05D005581 ORTHO05D006792 2.0e-07 58.9 61 49.2
Os06g0238300 Oryza sativa ssp. japonica HOM05D005581 ORTHO05D006792 2.7e-07 58.5 68 47.1
PSO832G2358 Papaver somniferum HOM05D005581 ORTHO05D006792 3.5e-07 58.2 71 45.1
CAN.G206.63 Capsicum annuum HOM05D005581 ORTHO05D006792 7.7e-07 57.0 71 42.3
Lsat_1_v5_gn_0_16520 Lactuca sativa HOM05D005581 ORTHO05D006792 7.7e-07 57.0 55 52.7
Sp7g01930 Schrenkiella parvula HOM05D005581 ORTHO05D006792 7.7e-07 57.0 65 47.7
Gohir.A05G361700 Gossypium hirsutum HOM05D005581 ORTHO05D006792 1.7e-06 55.8 71 42.3
Gorai.012G059200 Gossypium raimondii HOM05D005581 ORTHO05D006792 1.7e-06 55.8 68 42.6
Gohir.D04G052800 Gossypium hirsutum HOM05D005581 ORTHO05D006792 2.2e-06 55.5 71 40.8
Thhalv10027934m.g Eutrema salsugineum HOM05D005581 ORTHO05D006792 5.0e-06 54.3 65 44.6
SMO356G0730 Selaginella moellendorffii HOM05D005581 ORTHO05D006792 6.5e-06 53.9 61 49.2


User provided reference genes

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