Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.C24T6R Arachis hypogaea HOM05D002846 ORTHO05D002692 2.9e-74 282.3 206 100.0
arahy.Tifrunner.gnm1.ann1.SQ6SJP Arachis hypogaea HOM05D002846 ORTHO05D002692 4.3e-70 268.5 206 97.6
Lalb_Chr14g0367581 Lupinus albus HOM05D002846 ORTHO05D002692 3.5e-19 99.4 135 48.1
TPR.G19979 Trifolium pratense HOM05D002846 ORTHO05D002692 8.9e-15 84.7 93 57.0
Actinidia27214 Actinidia chinensis HOM05D002846 ORTHO05D002692 3.4e-14 82.8 142 44.4
Medtr2g083300 Medicago truncatula HOM05D002846 ORTHO05D002692 4.4e-14 82.4 134 46.3
Dinv40727 Davidia involucrata HOM05D002846 ORTHO05D002692 8.3e-13 78.2 133 42.9
MD03G1209200 Malus domestica HOM05D002846 ORTHO05D002692 2.4e-12 76.6 142 40.1
Actinidia05119 Actinidia chinensis HOM05D002846 ORTHO05D002692 5.4e-12 75.5 137 46.0
Glyma.12G212900 Glycine max HOM05D002846 ORTHO05D002692 7.0e-12 75.1 122 39.3
TAR626G0168 Trochodendron aralioides HOM05D002846 ORTHO05D002692 9.2e-12 74.7 142 42.3
Potri.001G419400 Populus trichocarpa HOM05D002846 ORTHO05D002692 1.2e-11 74.3 147 40.1
Potri.011G135700 Populus trichocarpa HOM05D002846 ORTHO05D002692 2.7e-11 73.2 143 39.2
TAR624G1330 Trochodendron aralioides HOM05D002846 ORTHO05D002692 3.5e-11 72.8 147 44.2
Haze_09635 Corylus avellana HOM05D002846 ORTHO05D002692 6.0e-11 72.0 133 40.6
GSVIVG01001985001 Vitis vinifera HOM05D002846 ORTHO05D002692 1.3e-10 70.9 131 42.7
Cfa020399 Carpinus fangiana HOM05D002846 ORTHO05D002692 1.7e-10 70.5 103 44.7
Prupe.4G205800 Prunus persica HOM05D002846 ORTHO05D002692 2.3e-10 70.1 96 47.9
Duzib213G0532 Durio zibethinus HOM05D002846 ORTHO05D002692 5.0e-10 68.9 135 42.2
Glyma.13G288700 Glycine max HOM05D002846 ORTHO05D002692 8.6e-10 68.2 117 43.6
Psat5g251520 Pisum sativum HOM05D002846 ORTHO05D002692 8.6e-10 68.2 84 50.0
TAR627G0783 Trochodendron aralioides HOM05D002846 ORTHO05D002692 1.5e-09 67.4 147 42.2
Sabra16G0285000 Salix brachista HOM05D002846 ORTHO05D002692 2.5e-09 66.6 145 39.3
QL08p012603 Quercus lobata HOM05D002846 ORTHO05D002692 5.6e-09 65.5 131 39.7
FvH4_3g22010 Fragaria vesca HOM05D002846 ORTHO05D002692 7.3e-09 65.1 145 40.0
Sed0016321 Sechium edule HOM05D002846 ORTHO05D002692 2.8e-08 63.2 81 50.6
ClCG02G008550 Citrullus lanatus HOM05D002846 ORTHO05D002692 3.6e-08 62.8 138 41.3
Hma1.2p1_1344F.1_g277060 Hydrangea macrophylla HOM05D002846 ORTHO05D002692 3.6e-08 62.8 128 39.8
MELO3C019247.2 Cucumis melo HOM05D002846 ORTHO05D002692 4.7e-08 62.4 79 49.4
Lsat_1_v5_gn_8_128540 Lactuca sativa HOM05D002846 ORTHO05D002692 4.7e-08 62.4 134 34.3
Lj1A867G31 Lonicera japonica HOM05D002846 ORTHO05D002692 8.1e-08 61.6 137 39.4
Nitab4.5_0002229g0220 Nicotiana tabacum HOM05D002846 ORTHO05D002692 1.1e-07 61.2 132 37.9
FAN25G2313 Fragaria x ananassa HOM05D002846 ORTHO05D002692 1.4e-07 60.8 145 38.6
Phvul.005G093000 Phaseolus vulgaris HOM05D002846 ORTHO05D002692 1.4e-07 60.8 70 52.9
Sabra11G0121900 Salix brachista HOM05D002846 ORTHO05D002692 1.4e-07 60.8 143 34.3
Sed0000680 Sechium edule HOM05D002846 ORTHO05D002692 1.4e-07 60.8 85 44.7
Thecc.07G046400 Theobroma cacao HOM05D002846 ORTHO05D002692 1.8e-07 60.5 89 48.3
CiPaw.11G185800 Carya illinoinensis HOM05D002846 ORTHO05D002692 2.3e-07 60.1 137 40.9
CsaV3_2G035090 Cucumis sativus L. HOM05D002846 ORTHO05D002692 2.3e-07 60.1 79 48.1
TWI38G1873 Tripterygium wilfordii HOM05D002846 ORTHO05D002692 2.3e-07 60.1 124 37.1
CSS0004659 Camellia sinensis var. sinensis HOM05D002846 ORTHO05D002692 3.1e-07 59.7 148 36.5
Eucgr.F00971 Eucalyptus grandis HOM05D002846 ORTHO05D002692 3.1e-07 59.7 146 37.7
Gohir.A01G076300 Gossypium hirsutum HOM05D002846 ORTHO05D002692 5.2e-07 58.9 133 39.1
FAN21G2316 Fragaria x ananassa HOM05D002846 ORTHO05D002692 6.8e-07 58.5 145 38.6
COL.COLO4_09606 Corchorus olitorius HOM05D002846 ORTHO05D002692 1.5e-06 57.4 134 35.1
Gohir.D13G145200 Gossypium hirsutum HOM05D002846 ORTHO05D002692 1.5e-06 57.4 80 43.8
Gohir.D01G063800 Gossypium hirsutum HOM05D002846 ORTHO05D002692 4.4e-06 55.8 89 43.8
Gorai.002G084300 Gossypium raimondii HOM05D002846 ORTHO05D002692 4.4e-06 55.8 99 43.4
TWI38G2122 Tripterygium wilfordii HOM05D002846 ORTHO05D002692 5.8e-06 55.5 134 38.1
Gohir.A13G140400 Gossypium hirsutum HOM05D002846 ORTHO05D002692 7.5e-06 55.1 85 40.0
Gohir.D12G159433 Gossypium hirsutum HOM05D002846 ORTHO05D002692 7.5e-06 55.1 101 44.6
Gorai.008G172600 Gossypium raimondii HOM05D002846 ORTHO05D002692 7.5e-06 55.1 101 44.6
TPR.G4201 Trifolium pratense HOM05D002846 ORTHO05D002692 7.5e-06 55.1 136 34.6
Gohir.A12G156600 Gossypium hirsutum HOM05D002846 ORTHO05D002692 9.9e-06 54.7 100 44.0
Nn1g07065 Nelumbo nucifera HOM05D002846 ORTHO05D002692 9.9e-06 54.7 135 38.5


User provided reference genes

Program Settings