Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.C23CI2 Arachis hypogaea HOM05D001194 ORTHO05D021482 1.4e-90 336.3 166 100.0
Ca_23295_v3 Cicer arietinum L. HOM05D001194 ORTHO05D005909 6.0e-38 161.4 96 83.3
arahy.Tifrunner.gnm1.ann1.2JHZ20 Arachis hypogaea HOM05D001194 ORTHO05D005909 7.1e-31 137.9 74 94.6
arahy.Tifrunner.gnm1.ann1.U81MKX Arachis hypogaea HOM05D001194 ORTHO05D005909 7.1e-31 137.9 74 94.6
arahy.Tifrunner.gnm1.ann1.V93RAK Arachis hypogaea HOM05D001194 ORTHO05D021482 6.0e-30 134.8 72 91.7
Glyma.08G196200 Glycine max HOM05D001194 ORTHO05D005909 1.8e-29 133.3 74 89.2
Lalb_Chr04g0263101 Lupinus albus HOM05D001194 ORTHO05D005909 1.8e-29 133.3 74 89.2
Phvul.010G141900 Phaseolus vulgaris HOM05D001194 ORTHO05D005909 1.8e-29 133.3 74 89.2
VMungo0331G0238 Vigna mungo HOM05D001194 ORTHO05D005909 1.8e-29 133.3 74 89.2
VMungo0331G0168 Vigna mungo HOM05D001194 ORTHO05D005909 3.0e-29 132.5 74 87.8
Manes.04G137500 Manihot esculenta HOM05D001194 ORTHO05D005909 3.9e-29 132.1 74 89.2
TWI79G1226 Tripterygium wilfordii HOM05D001194 ORTHO05D005909 3.9e-29 132.1 74 87.8
ClCG07G013590 Citrullus lanatus HOM05D001194 ORTHO05D005909 5.1e-29 131.7 74 87.8
Glyma.07G012500 Glycine max HOM05D001194 ORTHO05D005909 5.1e-29 131.7 74 87.8
Medtr8g015600 Medicago truncatula HOM05D001194 ORTHO05D005909 5.1e-29 131.7 74 86.5
Phvul.010G142000 Phaseolus vulgaris HOM05D001194 ORTHO05D005909 5.1e-29 131.7 74 87.8
Psat4g194400 Pisum sativum HOM05D001194 ORTHO05D005909 5.1e-29 131.7 74 86.5
QL05p015826 Quercus lobata HOM05D001194 ORTHO05D005909 5.1e-29 131.7 74 87.8
TPR.G8761 Trifolium pratense HOM05D001194 ORTHO05D005909 5.1e-29 131.7 74 86.5
CANSAT56G1148 Cannabis sativa HOM05D001194 ORTHO05D005909 6.7e-29 131.3 74 87.8
Dinv30399 Davidia involucrata HOM05D001194 ORTHO05D005909 6.7e-29 131.3 74 87.8
Dinv37933 Davidia involucrata HOM05D001194 ORTHO05D005909 6.7e-29 131.3 74 87.8
Atru.chr1.3635 Acer truncatum HOM05D001194 ORTHO05D005909 1.5e-28 130.2 74 86.5
Ciclev10025274m.g Citrus clementina HOM05D001194 ORTHO05D005909 1.5e-28 130.2 74 86.5
MELO3C013031.2 Cucumis melo HOM05D001194 ORTHO05D005909 1.5e-28 130.2 74 86.5
CsaV3_3G044050 Cucumis sativus L. HOM05D001194 ORTHO05D005909 1.5e-28 130.2 74 86.5
Sed0016739 Sechium edule HOM05D001194 ORTHO05D005909 1.5e-28 130.2 74 86.5
HanXRQChr09g0276311 Helianthus annuus HOM05D001194 ORTHO05D005909 1.9e-28 129.8 80 81.2
Sabra01G0156300 Salix brachista HOM05D001194 ORTHO05D005909 2.5e-28 129.4 74 85.1
CiPaw.01G227200 Carya illinoinensis HOM05D001194 ORTHO05D005909 3.3e-28 129.0 74 85.1
Eucgr.J02887 Eucalyptus grandis HOM05D001194 ORTHO05D005909 3.3e-28 129.0 74 85.1
CiPaw.02G142100 Carya illinoinensis HOM05D001194 ORTHO05D005909 4.3e-28 128.6 74 85.1
Haze_15919 Corylus avellana HOM05D001194 ORTHO05D005909 4.3e-28 128.6 74 85.1
Sed0012613 Sechium edule HOM05D001194 ORTHO05D005909 4.3e-28 128.6 74 85.1
GSVIVG01016891001 Vitis vinifera HOM05D001194 ORTHO05D005909 4.3e-28 128.6 74 83.8
Lsat_1_v5_gn_4_96000 Lactuca sativa HOM05D001194 ORTHO05D005909 5.7e-28 128.3 80 80.0
Potri.001G199600 Populus trichocarpa HOM05D001194 ORTHO05D005909 7.4e-28 127.9 74 83.8
Cfa003606 Carpinus fangiana HOM05D001194 ORTHO05D005909 9.6e-28 127.5 74 83.8
ECA232G0548 Erigeron canadensis HOM05D001194 ORTHO05D005909 9.6e-28 127.5 80 80.0
CSS0002183 Camellia sinensis var. sinensis HOM05D001194 ORTHO05D005909 1.3e-27 127.1 80 77.5
CSS0036616 Camellia sinensis var. sinensis HOM05D001194 ORTHO05D005909 1.3e-27 127.1 80 77.5
Cc04_g02210 Coffea canephora HOM05D001194 ORTHO05D005909 1.3e-27 127.1 74 83.8
TAR626G1853 Trochodendron aralioides HOM05D001194 ORTHO05D005909 1.3e-27 127.1 80 78.8
Nitab4.5_0001543g0050 Nicotiana tabacum HOM05D001194 ORTHO05D005909 1.6e-27 126.7 74 82.4
arahy.Tifrunner.gnm1.ann1.3FEZ81 Arachis hypogaea HOM05D001194 ORTHO05D005909 2.1e-27 126.3 74 83.8
DCAR_031424 Daucus carota HOM05D001194 ORTHO05D005909 2.1e-27 126.3 74 81.1
PSO063G4370 Papaver somniferum HOM05D001194 ORTHO05D005909 2.1e-27 126.3 71 84.5
PSO832G2057 Papaver somniferum HOM05D001194 ORTHO05D005909 2.1e-27 126.3 71 84.5
Peaxi162Scf00087g00133 Petunia axillaris HOM05D001194 ORTHO05D005909 2.1e-27 126.3 74 82.4
MSTRG.22605 Avicennia marina HOM05D001194 ORTHO05D005909 2.8e-27 125.9 74 82.4
CSS0021774 Camellia sinensis var. sinensis HOM05D001194 ORTHO05D005909 2.8e-27 125.9 74 81.1
PGSC0003DMG402006819 Solanum tuberosum HOM05D001194 ORTHO05D005909 3.7e-27 125.6 74 81.1
Oeu039981.1 Olea europaea HOM05D001194 ORTHO05D005909 4.8e-27 125.2 74 82.4
Solyc01g068210.3 Solanum lycopersicum HOM05D001194 ORTHO05D005909 4.8e-27 125.2 74 79.7
Sopen01g030150 Solanum pennellii HOM05D001194 ORTHO05D005909 4.8e-27 125.2 74 79.7
PGR102G0345 Punica granatum HOM05D001194 ORTHO05D005909 6.2e-27 124.8 74 79.7
Migut.D00978 Erythranthe guttata HOM05D001194 ORTHO05D005909 8.2e-27 124.4 74 79.7
Lj3g0000235 Lotus japonicus HOM05D001194 ORTHO05D005909 8.2e-27 124.4 74 81.1
Thecc.06G107800 Theobroma cacao HOM05D001194 ORTHO05D005909 8.2e-27 124.4 74 81.1
Actinidia32131 Actinidia chinensis HOM05D001194 ORTHO05D005909 1.1e-26 124.0 74 77.0
Ah.01g004470 Amaranthus hybridus HOM05D001194 ORTHO05D005909 1.1e-26 124.0 74 79.7
CAN.G410.38 Capsicum annuum HOM05D001194 ORTHO05D005909 1.1e-26 124.0 74 79.7
MD09G1196200 Malus domestica HOM05D001194 ORTHO05D005909 1.1e-26 124.0 74 78.4
MD17G1176900 Malus domestica HOM05D001194 ORTHO05D005909 1.1e-26 124.0 74 78.4
Nn6g35406 Nelumbo nucifera HOM05D001194 ORTHO05D005909 1.1e-26 124.0 74 81.1
Prupe.3G052600 Prunus persica HOM05D001194 ORTHO05D005909 1.1e-26 124.0 74 79.7
Actinidia21741 Actinidia chinensis HOM05D001194 ORTHO05D005909 1.4e-26 123.6 74 77.0
Hund00742 Selenicereus undatus HOM05D001194 ORTHO05D005909 1.4e-26 123.6 74 79.7
Duzib235G0439 Durio zibethinus HOM05D001194 ORTHO05D005909 1.8e-26 123.2 74 78.4
Lj3g0001136 Lotus japonicus HOM05D001194 ORTHO05D005909 3.1e-26 122.5 74 78.4
AUR62023909 Chenopodium quinoa HOM05D001194 ORTHO05D005909 5.3e-26 121.7 74 78.4
AUR62038337 Chenopodium quinoa HOM05D001194 ORTHO05D005909 5.3e-26 121.7 74 78.4
vmacro18821 Vaccinium macrocarpon HOM05D001194 ORTHO05D005909 5.3e-26 121.7 74 78.4
Aqoxy7G01307 Aquilegia oxysepala HOM05D001194 ORTHO05D005909 6.9e-26 121.3 74 77.0
COL.COLO4_30608 Corchorus olitorius HOM05D001194 ORTHO05D005909 6.9e-26 121.3 74 77.0
unitig_748.g7452 Utricularia gibba HOM05D001194 ORTHO05D005909 9.0e-26 120.9 74 78.4
Duzib160G0082 Durio zibethinus HOM05D001194 ORTHO05D005909 1.2e-25 120.6 74 77.0
Gohir.D10G063800 Gossypium hirsutum HOM05D001194 ORTHO05D005909 1.5e-25 120.2 74 77.0
Gorai.011G067700 Gossypium raimondii HOM05D001194 ORTHO05D005909 1.5e-25 120.2 74 77.0
Gohir.A10G062100 Gossypium hirsutum HOM05D001194 ORTHO05D005909 2.0e-25 119.8 74 77.0
THA.LOC104805919 Tarenaya hassleriana HOM05D001194 ORTHO05D005909 2.0e-25 119.8 71 83.1
Potri.001G193600 Populus trichocarpa HOM05D001194 ORTHO05D005909 2.6e-25 119.4 74 79.7
Lj5A49T38 Lonicera japonica HOM05D001194 ORTHO05D005909 3.4e-25 119.0 86 74.4
BcaB07g33628 Brassica carinata HOM05D001194 ORTHO05D005909 5.8e-25 118.2 71 80.3
BcaC01g01292 Brassica carinata HOM05D001194 ORTHO05D005909 5.8e-25 118.2 71 80.3
BcaC08g43332 Brassica carinata HOM05D001194 ORTHO05D005909 5.8e-25 118.2 71 80.3
A06p02290 Brassica napus HOM05D001194 ORTHO05D005909 5.8e-25 118.2 71 80.3
A08p02540 Brassica napus HOM05D001194 ORTHO05D005909 5.8e-25 118.2 71 80.3
C03p90270 Brassica napus HOM05D001194 ORTHO05D005909 5.8e-25 118.2 71 80.3
C06p06880 Brassica napus HOM05D001194 ORTHO05D005909 5.8e-25 118.2 71 80.3
BolC3t21349H Brassica oleracea HOM05D001194 ORTHO05D005909 5.8e-25 118.2 71 80.3
BolC6t35794H Brassica oleracea HOM05D001194 ORTHO05D005909 5.8e-25 118.2 71 80.3
BraA06t23435Z Brassica rapa HOM05D001194 ORTHO05D005909 5.8e-25 118.2 71 80.3
BraA08t32294Z Brassica rapa HOM05D001194 ORTHO05D005909 5.8e-25 118.2 71 80.3
Nn8g38927 Nelumbo nucifera HOM05D001194 ORTHO05D005909 5.8e-25 118.2 80 71.2
AL1G59660 Arabidopsis lyrata HOM05D001194 ORTHO05D005909 7.6e-25 117.9 71 80.3
CARHR041880 Cardamine hirsuta HOM05D001194 ORTHO05D005909 7.6e-25 117.9 71 80.3
Thhalv10011312m.g Eutrema salsugineum HOM05D001194 ORTHO05D005909 7.6e-25 117.9 71 80.3
FAN05G2672 Fragaria x ananassa HOM05D001194 ORTHO05D005909 7.6e-25 117.9 89 67.4
FAN14G3358 Fragaria x ananassa HOM05D001194 ORTHO05D005909 7.6e-25 117.9 89 67.4
Sp1g38360 Schrenkiella parvula HOM05D001194 ORTHO05D005909 7.6e-25 117.9 71 80.3
EL10Ac9g21120 Beta vulgaris HOM05D001194 ORTHO05D005909 1.0e-24 117.5 74 74.3
RcHm_v2.0_Chr2g0142481 Rosa chinensis HOM05D001194 ORTHO05D005909 1.0e-24 117.5 90 64.4
FAN02G4259 Fragaria x ananassa HOM05D001194 ORTHO05D005909 1.7e-24 116.7 74 75.7
AT1G51720 Arabidopsis thaliana HOM05D001194 ORTHO05D005909 2.2e-24 116.3 71 78.9
Carub.0001s4059 Capsella rubella HOM05D001194 ORTHO05D005909 2.2e-24 116.3 71 78.9
FvH4_6g32960 Fragaria vesca HOM05D001194 ORTHO05D005909 2.2e-24 116.3 74 75.7
FAN09G1927 Fragaria x ananassa HOM05D001194 ORTHO05D005909 2.2e-24 116.3 74 75.7
RcHm_v2.0_Chr2g0142511 Rosa chinensis HOM05D001194 ORTHO05D005909 2.2e-24 116.3 74 75.7
HPP92_023231 Vanilla planifolia HOM05D001194 ORTHO05D005909 2.2e-24 116.3 81 69.1
Aa31LG10G3090 Aethionema arabicum HOM05D001194 ORTHO05D005909 2.9e-24 115.9 71 80.3
SGA_v2.0_scaffold71G23749 Striga asiatica HOM05D001194 ORTHO05D005909 2.9e-24 115.9 74 77.0
arahy.Tifrunner.gnm1.ann1.HDE469 Arachis hypogaea HOM05D001194 ORTHO05D021482 5.0e-24 115.2 62 90.3
CDE05G0449 Ceratophyllum demersum HOM05D001194 ORTHO05D005909 6.5e-24 114.8 74 71.6
MBI04_g06219_MAGBIO Magnolia biondii HOM05D001194 ORTHO05D005909 5.5e-23 111.7 74 71.6
Os01g0558200 Oryza sativa ssp. japonica HOM05D001194 ORTHO05D005909 7.1e-23 111.3 81 66.7
CDE05G3462 Ceratophyllum demersum HOM05D001194 ORTHO05D005909 2.1e-22 109.8 67 74.6
SEGI_14715 Sequoiadendron giganteum HOM05D001194 ORTHO05D005909 2.1e-22 109.8 98 52.0
ATR0789G185 Amborella trichopoda HOM05D001194 ORTHO05D005909 2.7e-22 109.4 71 67.6
AagrBONN_evm.TU.Sc2ySwM_362.2881 Anthoceros agrestis HOM05D001194 ORTHO05D005909 8.7e-21 104.4 81 58.0
arahy.Tifrunner.gnm1.ann1.N6M4TT Arachis hypogaea HOM05D001194 ORTHO05D005909 1.9e-20 103.2 63 84.1
Rhsim08G0231400 Rhododendron simsii HOM05D001194 ORTHO05D005909 5.7e-20 101.7 107 55.1
Mapoly0010s0062 Marchantia polymorpha HOM05D001194 ORTHO05D005909 9.7e-20 100.9 75 61.3
SMO347G0060 Selaginella moellendorffii HOM05D001194 ORTHO05D005909 9.7e-20 100.9 77 59.7
SMO119G0344 Selaginella moellendorffii HOM05D001194 ORTHO05D005909 1.5e-17 93.6 76 57.9
SMO163G0008 Selaginella moellendorffii HOM05D001194 ORTHO05D005909 1.5e-17 93.6 76 57.9
Atru.chr1.3631 Acer truncatum HOM05D001194 ORTHO05D005909 3.4e-17 92.4 76 67.1
Pp3c2_4200 Physcomitrium patens HOM05D001194 ORTHO05D005909 3.4e-17 92.4 69 58.0
Nitab4.5_0000316g0210 Nicotiana tabacum HOM05D001194 ORTHO05D005909 7.7e-17 91.3 58 75.9
Pp3c14_22460 Physcomitrium patens HOM05D001194 ORTHO05D005909 2.2e-16 89.7 75 50.7
Pp3c1_36440 Physcomitrium patens HOM05D001194 ORTHO05D005909 2.2e-16 89.7 66 57.6
Glyma.09G152800 Glycine max HOM05D001194 ORTHO05D005909 1.4e-13 80.5 46 84.8
Cpa.g.sc131.30 Carica papaya HOM05D001194 ORTHO05D021482 2.5e-12 76.3 51 70.6


User provided reference genes

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