Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.C22IND Arachis hypogaea HOM05D003812 ORTHO05D004393 3.7e-44 181.0 83 100.0
arahy.Tifrunner.gnm1.ann1.NBB910 Arachis hypogaea HOM05D003812 ORTHO05D004393 2.4e-43 178.3 83 97.6
arahy.Tifrunner.gnm1.ann1.B1HR4A Arachis hypogaea HOM05D003812 ORTHO05D004393 1.6e-39 165.6 77 96.1
arahy.Tifrunner.gnm1.ann1.CNXN93 Arachis hypogaea HOM05D003812 ORTHO05D004393 1.6e-39 165.6 77 96.1
arahy.Tifrunner.gnm1.ann1.WBRQ5K Arachis hypogaea HOM05D003812 ORTHO05D004393 1.4e-38 162.5 78 94.9
Lj2g0024194 Lotus japonicus HOM05D003812 ORTHO05D004393 2.5e-32 141.7 100 69.0
Lj2g0003816 Lotus japonicus HOM05D003812 ORTHO05D004393 2.1e-31 138.7 100 68.0
Hma1.2p1_0381F.1_g140060 Hydrangea macrophylla HOM05D003812 ORTHO05D004393 6.1e-31 137.1 73 80.8
Psat3g143480 Pisum sativum HOM05D003812 ORTHO05D004393 1.5e-29 132.5 98 65.3
Lalb_Chr05g0212031 Lupinus albus HOM05D003812 ORTHO05D004393 2.0e-29 132.1 100 64.0
TPR.G11261 Trifolium pratense HOM05D003812 ORTHO05D004393 2.6e-29 131.7 98 64.3
arahy.Tifrunner.gnm1.ann1.8MB3N8 Arachis hypogaea HOM05D003812 ORTHO05D004393 5.7e-29 130.6 61 95.1
Phvul.002G113100 Phaseolus vulgaris HOM05D003812 ORTHO05D004393 7.4e-29 130.2 98 63.3
Ca_17095_v3 Cicer arietinum L. HOM05D003812 ORTHO05D004393 9.7e-29 129.8 98 64.3
Rhsim09G0003800 Rhododendron simsii HOM05D003812 ORTHO05D004393 9.7e-29 129.8 99 61.6
TPR.G23263 Trifolium pratense HOM05D003812 ORTHO05D004393 9.7e-29 129.8 99 62.6
CSS0041441 Camellia sinensis var. sinensis HOM05D003812 ORTHO05D004393 6.3e-28 127.1 97 61.9
FAN17G2490 Fragaria x ananassa HOM05D004444 ORTHO05D005246 6.3e-28 127.1 75 69.3
Glyma.11G082800 Glycine max HOM05D003812 ORTHO05D004393 1.4e-27 125.9 98 61.2
VMungo1215G0546 Vigna mungo HOM05D003812 ORTHO05D004393 1.4e-27 125.9 98 61.2
arahy.Tifrunner.gnm1.ann1.SFVM41 Arachis hypogaea HOM05D003812 ORTHO05D004393 1.8e-27 125.6 100 63.0
FAN26G2119 Fragaria x ananassa HOM05D003812 ORTHO05D004393 1.8e-27 125.6 75 68.0
FAN07G0162 Fragaria x ananassa HOM05D004444 ORTHO05D005246 2.4e-27 125.2 75 68.0
FAN07G2723 Fragaria x ananassa HOM05D003812 ORTHO05D004393 2.4e-27 125.2 75 68.0
CANSAT54G2113 Cannabis sativa HOM05D003812 ORTHO05D004393 3.1e-27 124.8 98 59.2
arahy.Tifrunner.gnm1.ann1.U9V8RX Arachis hypogaea HOM05D003812 ORTHO05D004393 9.1e-27 123.2 106 59.4
Nitab4.5_0003520g0020 Nicotiana tabacum HOM05D003812 ORTHO05D004393 9.1e-27 123.2 74 70.3
Thecc.03G204100 Theobroma cacao HOM05D003812 ORTHO05D004393 9.1e-27 123.2 97 59.8
MD15G1143400 Malus domestica HOM05D003812 ORTHO05D004393 1.6e-26 122.5 98 58.2
Medtr7g059160 Medicago truncatula HOM05D003812 ORTHO05D004393 1.6e-26 122.5 98 60.2
TWI63G1503 Tripterygium wilfordii HOM05D003812 ORTHO05D004393 2.0e-26 122.1 98 58.2
Cfa008512 Carpinus fangiana HOM05D003812 ORTHO05D004393 3.5e-26 121.3 98 59.2
COL.COLO4_16818 Corchorus olitorius HOM05D003812 ORTHO05D004393 5.9e-26 120.6 97 57.7
EL10Ac3g06164 Beta vulgaris HOM05D003812 ORTHO05D004393 7.7e-26 120.2 76 67.1
CiPaw.01G201400 Carya illinoinensis HOM05D003812 ORTHO05D004393 7.7e-26 120.2 98 58.2
Manes.01G010200 Manihot esculenta HOM05D003812 ORTHO05D004393 7.7e-26 120.2 98 57.1
Cpa.g.sc151.5 Carica papaya HOM05D003812 ORTHO05D004393 1.3e-25 119.4 99 56.6
Prupe.7G062100 Prunus persica HOM05D003812 ORTHO05D004393 1.3e-25 119.4 98 56.1
Actinidia18400 Actinidia chinensis HOM05D003812 ORTHO05D004393 1.7e-25 119.0 97 57.7
GSVIVG01038248001 Vitis vinifera HOM05D003812 ORTHO05D004393 1.7e-25 119.0 97 58.8
Solyc12g011180.3 Solanum lycopersicum HOM05D003812 ORTHO05D004393 2.2e-25 118.6 74 67.6
QL10p064313 Quercus lobata HOM05D003812 ORTHO05D004393 2.9e-25 118.2 98 56.1
HanXRQChr05g0135721 Helianthus annuus HOM05D003812 ORTHO05D004393 8.5e-25 116.7 99 54.5
MBI16_g29049_MAGBIO Magnolia biondii HOM05D003812 ORTHO05D004393 8.5e-25 116.7 74 68.9
MSTRG.26255 Avicennia marina HOM05D003812 ORTHO05D004393 1.1e-24 116.3 98 56.1
Cc06_g19240 Coffea canephora HOM05D003812 ORTHO05D004393 1.1e-24 116.3 102 54.9
SGA_v2.0_scaffold12G06029 Striga asiatica HOM05D003812 ORTHO05D004393 1.1e-24 116.3 98 57.1
Migut.K00296 Erythranthe guttata HOM05D003812 ORTHO05D004393 1.5e-24 115.9 99 54.5
Peaxi162Scf00463g00428 Petunia axillaris HOM05D003812 ORTHO05D004393 1.5e-24 115.9 70 71.4
arahy.Tifrunner.gnm1.ann1.SF8VIF Arachis hypogaea HOM05D003812 ORTHO05D004393 1.9e-24 115.5 52 98.1
unitig_37.g12590 Utricularia gibba HOM05D003812 ORTHO05D004393 1.9e-24 115.5 98 56.1
BcaB05g23118 Brassica carinata HOM05D003812 ORTHO05D004393 2.5e-24 115.2 97 54.6
A01p24730 Brassica napus HOM05D003812 ORTHO05D004393 2.5e-24 115.2 97 54.6
BraA01t02385Z Brassica rapa HOM05D003812 ORTHO05D004393 2.5e-24 115.2 97 54.6
Potri.017G007200 Populus trichocarpa HOM05D003812 ORTHO05D004393 2.5e-24 115.2 98 55.1
Aa31LG11G3700 Aethionema arabicum HOM05D003812 ORTHO05D004393 3.2e-24 114.8 97 53.6
ECA246G4500 Erigeron canadensis HOM05D003812 ORTHO05D004393 3.2e-24 114.8 97 54.6
AL6G36030 Arabidopsis lyrata HOM05D003812 ORTHO05D004393 5.5e-24 114.0 96 54.2
AT5G24450 Arabidopsis thaliana HOM05D003812 ORTHO05D004393 5.5e-24 114.0 96 54.2
BcaB07g31049 Brassica carinata HOM05D003812 ORTHO05D004393 5.5e-24 114.0 96 55.2
CARHR188960 Cardamine hirsuta HOM05D003812 ORTHO05D004393 5.5e-24 114.0 96 54.2
FAN23G1808 Fragaria x ananassa HOM05D003812 ORTHO05D004393 5.5e-24 114.0 98 53.1
Sp5g12660 Schrenkiella parvula HOM05D003812 ORTHO05D004393 5.5e-24 114.0 97 54.6
Thhalv10003925m.g Eutrema salsugineum HOM05D003812 ORTHO05D004393 7.2e-24 113.6 96 54.2
Ciclev10027241m.g Citrus clementina HOM05D003812 ORTHO05D004393 9.4e-24 113.2 99 53.5
FvH4_1g00230 Fragaria vesca HOM05D003812 ORTHO05D004393 9.4e-24 113.2 98 53.1
RcHm_v2.0_Chr2g0084521 Rosa chinensis HOM05D003812 ORTHO05D004393 9.4e-24 113.2 98 53.1
Sabra17G0008000 Salix brachista HOM05D003812 ORTHO05D004393 9.4e-24 113.2 98 54.1
Carub.0006s2228 Capsella rubella HOM05D003812 ORTHO05D004393 1.6e-23 112.5 96 53.1
Nitab4.5_0010162g0010 Nicotiana tabacum HOM05D003812 ORTHO05D004393 1.6e-23 112.5 98 55.1
THA.LOC104814949 Tarenaya hassleriana HOM05D003812 ORTHO05D004393 1.6e-23 112.5 97 51.5
FvH4_4g37371 Fragaria vesca HOM05D003812 ORTHO05D004393 2.1e-23 112.1 98 52.0
Ah.13g073180 Amaranthus hybridus HOM05D003812 ORTHO05D004393 2.7e-23 111.7 97 53.6
BcaB07g29910 Brassica carinata HOM05D003812 ORTHO05D004393 2.7e-23 111.7 96 54.2
BcaC09g49951 Brassica carinata HOM05D003812 ORTHO05D004393 2.7e-23 111.7 97 53.6
A02p40330 Brassica napus HOM05D003812 ORTHO05D004393 2.7e-23 111.7 96 54.2
C01p30850 Brassica napus HOM05D003812 ORTHO05D004393 2.7e-23 111.7 97 53.6
BolC1t03017H Brassica oleracea HOM05D003812 ORTHO05D004393 2.7e-23 111.7 97 53.6
Lsat_1_v5_gn_8_131861 Lactuca sativa HOM05D003812 ORTHO05D004393 2.7e-23 111.7 99 51.5
BcaC03g17974 Brassica carinata HOM05D003812 ORTHO05D004393 3.6e-23 111.3 96 54.2
C02p60290 Brassica napus HOM05D003812 ORTHO05D004393 3.6e-23 111.3 96 54.2
BolC2t12085H Brassica oleracea HOM05D003812 ORTHO05D004393 3.6e-23 111.3 96 54.2
BraA02t09001Z Brassica rapa HOM05D003812 ORTHO05D004393 3.6e-23 111.3 96 54.2
CARHR158380 Cardamine hirsuta HOM05D003812 ORTHO05D004393 3.6e-23 111.3 97 52.6
AL5G29170 Arabidopsis lyrata HOM05D003812 ORTHO05D004393 4.7e-23 110.9 97 52.6
AT3G49410 Arabidopsis thaliana HOM05D003812 ORTHO05D004393 4.7e-23 110.9 97 52.6
Carub.0005s1565 Capsella rubella HOM05D003812 ORTHO05D004393 6.1e-23 110.5 97 52.6
BcaC03g17970 Brassica carinata HOM05D003812 ORTHO05D004393 8.0e-23 110.2 96 53.1
Sp2g22880 Schrenkiella parvula HOM05D003812 ORTHO05D004393 8.0e-23 110.2 96 53.1
Gohir.A08G102525 Gossypium hirsutum HOM05D003812 ORTHO05D004393 4.0e-22 107.8 97 51.5
Gohir.D08G113808 Gossypium hirsutum HOM05D003812 ORTHO05D004393 4.0e-22 107.8 97 51.5
Gorai.004G122600 Gossypium raimondii HOM05D003812 ORTHO05D004393 4.0e-22 107.8 97 51.5
Potri.007G145000 Populus trichocarpa HOM05D003812 ORTHO05D004393 4.0e-22 107.8 98 52.0
Atru.chr3.1997_Atru.chr3.1998 Acer truncatum HOM05D003812 ORTHO05D004393 5.2e-22 107.5 99 50.5
Thhalv10010256m.g Eutrema salsugineum HOM05D003812 ORTHO05D004393 5.2e-22 107.5 96 51.0
CAN.G164.18 Capsicum annuum HOM05D003812 ORTHO05D004393 6.7e-22 107.1 97 52.6
PSO170G6215 Papaver somniferum HOM05D003812 ORTHO05D004393 6.7e-22 107.1 96 52.1
Sc25g0002340 Simmondsia chinensis HOM05D003812 ORTHO05D004393 6.7e-22 107.1 97 54.6
Aqoxy4G02750 Aquilegia oxysepala HOM05D003812 ORTHO05D004393 8.8e-22 106.7 98 53.1
PGR142G2470 Punica granatum HOM05D003812 ORTHO05D004393 8.8e-22 106.7 99 50.5
SalBow5G1511 Salvia bowleyana HOM05D003812 ORTHO05D004393 8.8e-22 106.7 110 48.2
SalBow5G1547 Salvia bowleyana HOM05D003812 ORTHO05D004393 8.8e-22 106.7 110 48.2
Nn1g08169 Nelumbo nucifera HOM05D003812 ORTHO05D004393 1.5e-21 105.9 100 50.0
AUR62002481 Chenopodium quinoa HOM05D003812 ORTHO05D004393 2.0e-21 105.5 97 51.5
Sopen12g006540 Solanum pennellii HOM05D003812 ORTHO05D004393 2.0e-21 105.5 97 51.5
Aqoxy7G02949 Aquilegia oxysepala HOM05D003812 ORTHO05D004393 3.3e-21 104.8 98 52.0
TAR362G0390 Trochodendron aralioides HOM05D003812 ORTHO05D004393 3.3e-21 104.8 97 51.5
DCAR_023841 Daucus carota HOM05D003812 ORTHO05D004393 2.2e-20 102.1 97 50.5
ClCG09G014660 Citrullus lanatus HOM05D003812 ORTHO05D004393 4.8e-20 100.9 98 53.1
vmacro06691 Vaccinium macrocarpon HOM05D003812 ORTHO05D004393 4.1e-19 97.8 190 33.2
MELO3C026683.2 Cucumis melo HOM05D003812 ORTHO05D004393 1.6e-18 95.9 98 51.0
CDE05G0093 Ceratophyllum demersum HOM05D003812 ORTHO05D004393 2.0e-18 95.5 99 45.5
Sed0027703 Sechium edule HOM05D003812 ORTHO05D004393 4.5e-18 94.4 98 48.0
CsaV3_5G037130 Cucumis sativus L. HOM05D003812 ORTHO05D004393 1.9e-16 89.0 98 46.9
Lj4C178G3 Lonicera japonica HOM05D003812 ORTHO05D004393 7.2e-16 87.0 42 85.7
Pp3c16_3240 Physcomitrium patens HOM05D003812 ORTHO05D004393 2.1e-15 85.5 99 41.4
Mapoly0019s0182 Marchantia polymorpha HOM05D003812 ORTHO05D004393 3.6e-15 84.7 94 42.6
HanXRQChr17g0553321 Helianthus annuus HOM05D003812 ORTHO05D004393 1.2e-13 79.7 72 55.6
HPP92_018576 Vanilla planifolia HOM05D003812 ORTHO05D004393 1.2e-13 79.7 96 41.7
Zm00001eb420200 Zea mays HOM05D003812 ORTHO05D004393 2.6e-13 78.6 96 39.6
SMO367G0920 Selaginella moellendorffii HOM05D003812 ORTHO05D004393 2.2e-12 75.5 101 38.6
AagrBONN_evm.TU.Sc2ySwM_344.3654 Anthoceros agrestis HOM05D003812 ORTHO05D004393 2.4e-11 72.0 103 35.0
Sc13g0007560 Simmondsia chinensis HOM05D003812 ORTHO05D004393 1.2e-10 69.7 48 66.7
Hund12301 Selenicereus undatus HOM05D003812 ORTHO05D004393 5.9e-10 67.4 44 63.6
TAR636G0254 Trochodendron aralioides HOM05D003812 ORTHO05D004393 1.7e-09 65.9 46 60.9
SEGI_01468 Sequoiadendron giganteum HOM05D003812 ORTHO05D004393 6.5e-09 63.9 48 52.1
Oeu022463.3 Olea europaea HOM05D003812 ORTHO05D004393 3.2e-08 61.6 28 85.7
Haze_11132 Corylus avellana HOM05D003812 ORTHO05D004393 5.5e-08 60.8 27 88.9
Cc00_g24630 Coffea canephora HOM05D003812 ORTHO05D004393 2.7e-07 58.5 28 82.1
Nitab4.5_0000160g0140 Nicotiana tabacum HOM05D003812 ORTHO05D004393 2.7e-07 58.5 28 78.6
AUR62023711 Chenopodium quinoa HOM05D003812 ORTHO05D004393 2.3e-06 55.5 28 75.0
Aa31LG4G17960 Aethionema arabicum HOM05D003812 ORTHO05D004393 3.0e-06 55.1 77 36.4


User provided reference genes

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